Anguilla rostrata (American eel): 135236019 Help Entry 135236019         CDS       T10705                                  Symbol dchs1a Name (RefSeq) protocadherin-16 isoform X1   KO K16507   protocadherin-16/23 Organism arot  Anguilla rostrata (American eel) Brite KEGG Orthology (KO) [BR:arot00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:arot04515]     135236019 (dchs1a) Cell adhesion molecules [BR:arot04515]  Cadherins   Cadherin related    135236019 (dchs1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th RET_CLD1 Fibulin_C Cadherin_4 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  135236019 NCBI-ProteinID:  XP_064158213 LinkDB All DBs Position 12:complement(33792210..33918675) Genome browser AA seq 3305 aa AA seqDB search MNVSEETVTMKTMASDRGTGKSALSPLRKHGSWNKRVLLLLYVALELIAVHSSAVLGTLE LQLDEEQPAGTIVGDISAGLPPGVTASVFFISDHEGTGVGSDLHIDETTGIIKTAKVLDR EARDRYNFIAVTMTGVTVEVTITVNDINDHAPTFPRKRATFTIPEQTAVGTRFSLDPAPD ADRDQLTTQGYLIKDGNVGQAFLLETRRGSNKVLYLDLVVNAILDRETRSSYTLLLEAFD GGSPKKTGQMILDVTVQDVNDNAPVFNQSRYHATITENLQPGSNILQVFASDADEGANGL VLYEINRRQSDPEHYFVIDPRSGVITLNKPLDYEMRRVHELVVQARDNASHPEVTNAFVT IQVRDYNDNQPTMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGD GKFALTTKDNIIYLICVDQILDREERDSYELHVMATDSGTPPLRAESSFTIQVTDVNDNP PAFDQPEYRQTIPEVVYPGSFVLQVTARDKDQGPNGDIRYSLLRDHGTHSDWFAIDPQTG IITTSSQLDYETDPRPSVTVVATDRGRPPLSSTAVVNVLLQDINDNEPVFGSNFYNVTIK ENTPAGTCFLEVTATDADGGSFGSVSYSMGSGVGGAPPSQFTVGRETGRICTSAALDREQ GAASYDFTVTAVDGGGLNSVAYVKVYLQDINDNAPSFYPLHYAVSLNAQSPPGTSVVRVT AYDPDVGKNGRVTYRVVPGSGSSYFTLNKDTGVVSLSRSLHGKANSIIPLVIAAQDGGGL AAPANARVNISVVAGSVAPPVFEQAQYFFTVSEDVLRGTEVGVVRAASRSGASKDITYAI YSGDPDGYFTVDPETGALRTGLPLDHEARPALELEVQARSGSPPAFGMARVRVTVADVND NAPAFLPSSSESLLLAEATALGAVVYRVRAEDRDSGANGRLSFDLLPDGAGRRPFAVDRA SGEVRLVGALSYEAAPRYDLLVTARDGGAPQLSATFTLVVHVQAEDQQGPVFDALTYRVE LREDTPLNTRFLQVRALSREAGGGGAAPSGPLEYHLRPDGDAAGFGVAADSGWLFVRSAL DREAKDMYLLTVLVTAGAGPLKRTGSATVRVSVTDVNDNAPRLSQDRAFLAVRENLPPGT GFGRVSASDRDAGLNGRLSYRLLHPDRTFQINSQTGEISTRVALNREHQSGYQLVVVVQD GGTPPRSATGTAHITVLDENDNAPSFTRRELLMQVLEGQPAGSLLGTVQAKDPDEGENGT VFYSLSGPRAELFSLDPVTGELRSSSPLLLSERAEYSFTVSATDHGLPPQSSSTSLRIQV LSSSRTTPKPNSMSMTISSVEGAKPGSVIGSVASHDKQRAPEAGQVTYVVVGGTDRDGTF MVDRLTGDVYLTRELDYEEGARYTLQVEVDDFSKAYPSSHLVQLDIEVQDSNDHAPQFPE DPVTIVVPENMEPGSSVYTFQAEDRDGTGPNSEVHYSILHRWPDTPDLLLLDPATGVLTL GGALDHEAASSLLLVVQATDSAPDPAQRRRGSVTARVFVTDENDNAPVFGSPAAVSVMED QPAGFVVLYVMARDADRGENGRVSYRIRDGNAGGKFSLNPDTGSLSILKPIDREEQELYN LTVVAEDHGTPQRSATQLLSVQVIDVNDEAPRFERAEFEAEILENQPPGTPVLTVSASDF DQGTNGVVTYGGVAETGFAIDPVTGVISATRALDREVQDRYTITVYAKDGGLPPKFAKAS VRVAVRDENDNAPAFGRPYYALEAPENLEPVELFTLRATDLDAGSSGEVEYRITAGDPAG DFRLDKSSGVLWTARALDRERKARYALTVVAQDRGSPPLSGSATVDVAVLDVNDNGPRFD SAGYAAEVREDAAAGSLVLQASAADEDAGSNGEVLYFLSGEAGGAFAVDPETGRVTTAAA LDREKRASYSFRVCATDRAPAAPRNASAPVTVHVLDVNDNAPFFVQDPLVINVSSGGGGG GTGRQVVATMRAEDKDFGANGSVFYRFASPARGFAINSLTGDIQVSERHLALSQSQRTLI VEAMDQGSPAQSSLGVVLVYVKEQEYRGIRFSRNARDVSLQENAAKGTAVVQTQAQYPDG TRSGINYSIFSGNRLQSFRISPTTGEIWVQSSTGLDFEENPRLRLVVKAETASSSSYMAV NLILQDVNDNLPRFQLQNYVAYIRESQGYDFPIIQVLADDLDQGQNGQVTYSIKSSSMSG LFRIDPLTGSISTAAIMDREIWTQTKLVVTATDRGSPRLAGSATLTVIIVDLNDNSPTIP LPREIRVPENTLIGTEITQVTGNDVDSGPALSYTLQLDGHARGKFGIHRYGGGVSLTAPL DFEERTWYTLTVRASDSRHQSEANLTVLVEDVNDNAPVFTQDLYQVTLLEHSPPGSPVIT VTATDRDSGENGKVTYRVMSSTRDGFHIDPSNGTLFFNRRVEFDPKRPAITVVIEARDGG TPALSSIATVQVQVSDVNDNAPLFPQSEYWATVPEDSLPGATVLTLEAVDGDPSRENCGF DFAIASGNAGDAFQIESSVRFLEGRGFQTVGTLILAQRLDFEAARLYNLTVVASDRGVPQ RSSSVSAVVAVADADDNPPAFGRAEYAVALSEGAAAGTEILRLTATDPDSAPNAEVRYAI SSGDDTGLFSVDPGTGALRLQRALDREGQPHHTVIVQASDGRGHYALAPVTVEVKDVNDN RPYFPLKTLTASIRENRPADSPVTVLHAIDHDAGVYGQLRYYMVDKAGEGKESFLVNQTS GEVRARRTFDFEKASSFSFVALAVDAGNYSATVTVQVYVTGEDEYDPVFAASDLSLEVPE GARKGQSIGQVQASDEDEGVDGIVLYSLAESSPYFEVNRTTGVVSLKVDGSGRHGGSGRA KREARQMTLDVTARGPLESSRSATARLTVDVTRTSFGLATDVNILLVSGVAASLGAIVIL AVVAVALFLASSRRRKKEREARNRATAPGTALQKLEESKVTGPSDRIYHQALPGYASDQA GSAVGPYTRGGSLDPSHSSGRGSADAEAAEDDEIRMINEYPRVSSISSSMQEHISARGPD SGIQQDADQLSDISCEPGVEAGGQWFKGKKLGSLSGTLLSGQHPVYRDEGGGYLGVGRGL SISHPKDYAFPEDGKPAVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIAR LKDENAPPGNPRRPFQPKAKADPKPRIDPPPLITSVAHPGAKSVPPKPAVGRTFPHLASL RRSPISHEGSISSAAMSPSFSPSLSPLATRSPAVSPFGVTQGPSAHMISTTEHSLEHSEE AELRI NT seq 9918 nt NT seq  +upstreamnt  +downstreamnt atgaatgtaagtgaggaaacggtcaccatgaagacgatggcttcggacagaggtacaggg aagagtgcgctgagcccactgcggaagcacgggtcctggaataagagggtgctgctgttg ctctacgtggcgctggagctcatcgccgtccactcctccgcggtcctgggaaccctggag ctgcagctggacgaggagcagccggcgggcaccatcgtgggggacatcagcgccggcttg ccccccggcgtcaccgcctcggttttcttcatctcggaccacgagggcaccggcgtgggc agcgacctgcacatcgacgagaccacgggcatcatcaagaccgccaaggtcctggaccgg gaggcgagggaccgctacaacttcatcgccgtcaccatgacgggggtgacggtggaggtg accatcacggtgaacgacatcaacgaccacgcgcctaccttccccaggaagagggccaca ttcacgatcccggagcagacggctgtcgggaccaggttctccctggatccagcccccgat gcagacagagaccagctgaccactcaaggctacttgatcaaggacggaaacgtgggccag gctttcctcctggagaccaggaggggaagcaacaaagtgctctacctggatttggtggtc aacgccatcctggacagagagacgaggtcgtcctacaccttgctcctggaggcctttgac ggaggctcccccaagaagactggacagatgatcctggacgtgactgttcaggacgtcaat gacaacgcccccgtcttcaaccagagccgctaccacgccacgatcactgagaacctgcag cccggcagcaacatcctgcaggtgttcgcttccgatgcggatgagggggcaaacgggctg gtgctgtatgagattaacaggagacagagcgacccagagcactacttcgtgattgatccc cgctcaggcgtcatcacgctcaacaagcccctggactacgagatgaggagagtccatgag ctggtggtgcaggcccgggacaacgccagccacccggaggtcaccaacgccttcgtcacc atccaggtgcgcgactacaacgacaaccagcccaccatgaccatcatcttcctcagcgag gacggctcgcccaggatctccgagggcgcacagcccggccagtacgtggcccggatctcc gtcaccgacccggactacggcgagtacgccaacgtgaacgtgtccctggagggcggggac ggcaagttcgccctgaccaccaaggacaacatcatctacctcatctgcgtggaccagatc ctggaccgcgaggagcgcgactcgtacgagctgcacgtcatggccaccgactccggcacc ccgcccctccgggccgagtcctccttcaccatccaggtgaccgacgtcaacgacaacccg ccggccttcgaccagccggagtaccgccagaccatcccggaggtggtgtaccccgggagc ttcgtgctccaggtcacagcccgggacaaggaccagggccccaacggggacattcgctac agcctcctgcgggaccacgggactcactctgactggttcgccatcgacccccagacgggg ataatcaccacatcctcgcagctggattacgagacggaccccaggcccagcgtgaccgtg gtggccacggacagggggcggcctcccctttcctccacggccgtggtcaacgtcctgttg caggatataaacgacaacgagcccgttttcgggagcaacttctacaacgtgaccatcaag gagaacacgcctgccgggacatgcttcctagaggtgacggcgaccgacgcggacggcggc tccttcggcagcgtgagctactccatgggctcgggcgtgggcggcgccccgccctcccag ttcaccgtcggcagggagacgggccggatctgcacgtccgcggcgctggaccgagaacag ggcgccgccagctacgacttcaccgtcacggccgtggacgggggcggcctgaactccgtg gcctacgtgaaggtctacctgcaggacatcaacgacaacgcgcccagcttctacccgctg cactacgccgtcagcctcaacgcccagagcccgccgggcacctccgtcgtcagggtgacg gcctacgaccccgacgtggggaagaacggcagggtgacgtatcgcgtcgttccggggagc ggctcctcctacttcacgctgaacaaagacacaggcgtggtctctctgtcccgctctctc cacgggaaggcgaactccatcatcccgctggtgatcgccgcccaggacgggggcgggctg gcggctccggccaacgccagggtcaacatcagcgtggtggccggctcggtggcgccccct gtgttcgagcaggcgcagtacttcttcaccgtgtccgaggacgtcctgcgcggaaccgaa gtgggcgtggtgcgggccgccagcaggagcggggcctctaaggacatcacctacgccatc tactcgggcgacccggacggctacttcacggtggaccccgaaacgggcgccctgcggacc ggcctgccgctggaccacgaggcgcgccccgccctggagctggaggtgcaggcgcggtcc ggctcgcccccggccttcggcatggcgcgggtccgagtgaccgtggccgacgtcaacgac aacgcgcccgccttcctgccctcctcctccgagtcgctgctgctggccgaggccacggcg ctgggcgcggtggtgtaccgggtccgggccgaggaccgggactcgggcgccaacgggcgg ctgagcttcgacctgctgccggacggcgccgggcgacgccccttcgccgtggaccgggcc agcggggaggtgcggctggtgggcgcgctctcgtacgaggcggccccgcgctacgacctg ctggtgacggcgcgggacggcggcgcgccccagctcagcgccaccttcacgctggtggtg cacgtgcaggcggaggaccagcagggccccgtcttcgacgcgctcacctacagggtggag ctgcgggaggacacgcccctcaatacccgcttcctccaggtgagggcgctgagccgcgag gccggcgggggcggggccgcgccctcgggcccgctggagtaccacctgcggccggacggg gacgcggcggggttcggcgtcgccgcggacagcggctggctgttcgtgaggagcgcgctg gaccgcgaggccaaggacatgtacctgctgacggtgctggtgacggcgggggcggggccg ctcaagcggaccggcagcgccaccgtcagggtgtcggtgacggacgtgaacgacaacgcg ccccgcctctcgcaggaccgcgccttcctggcggtgcgggagaacctgccgccggggacg gggttcggcagggtgtccgccagcgaccgggacgccggcctcaacggccgcctctcctac cgcctcctgcaccccgacagaaccttccagatcaactctcagacgggtgagatcagtacc agggtggctctgaacagggagcaccagtcggggtaccagctggtggtggtggtgcaggac gggggcacgcccccccgcagcgccacgggcaccgcccacatcaccgtgctggacgagaac gacaacgccccctccttcacccgcagagagctgctcatgcaggtcttggaggggcagcca gccggctctctgctggggacagtgcaggccaaagacccagacgagggggagaacggcacc gtcttctactctctgtcaggccccagggccgagctcttctccctggacccggtcacagga gagctgcgctcctcctcccctctgctcctctcagagagagcagagtacagcttcactgtg agcgccacagaccacggcctgcctcctcagagctcctcaaccagcctgcgcatacaggtg ctgagctctagcaggactactcccaaacccaattccatgtccatgacaatcagctcggtg gagggtgccaaaccgggctccgtgattggttccgtcgcatcacatgacaagcagcgggcg cccgaggcgggtcaggtgacctacgtggtggtgggcgggacggaccgggacgggacgttc atggtggaccggctgacgggggacgtgtacctgacccgggagctggactacgaggagggc gcccgctacaccctccaggtcgaggtggacgacttctccaaggcctatcccagcagccac ctggtgcagctggacatcgaggtgcaggacagcaacgaccacgcgccccagttccccgag gaccccgtcaccatcgtggtccccgaaaacatggagcccggctcctccgtctacaccttc caggcggaggaccgcgacgggacggggcccaacagcgaggtgcactactccatccttcac cgctggcctgacacccccgacctgctcctcctggaccccgccacgggggtgctgacgctg ggcggggccctggaccacgaggccgcctcctccctcctcctggtggtgcaggccacggac tccgcccccgaccccgcccagcggcgtcggggctcggtgacggcccgcgtcttcgtgacg gacgagaacgacaacgcgcccgtgttcgggtcgccggccgccgtcagcgtgatggaggac cagccggcgggcttcgtggtgctctacgtcatggcgcgggacgccgaccgcggcgagaac ggccgcgtctcctaccgcatccgggacgggaacgccggcgggaagttcagcctcaacccc gacaccggttctctgtccatcctcaagcctattgaccgcgaggagcaggagctgtacaac ctcaccgtggtcgcagaggatcatgggacgccgcagcgctccgccacccagctgctgtcg gtgcaggtgatcgacgtcaacgacgaggcgccgaggttcgagcgggcggagttcgaggcg gaaatcctcgagaaccagccgcccggaaccccggtcctgaccgtgtccgcttccgatttc gaccaagggaccaatggcgtggtgacctacggaggtgtggcagagacgggcttcgccatc gatccggtgacaggcgtaatatcggccacccgagccctggacagggaggtgcaggaccgc tacactatcacagtgtacgccaaagacggcgggctgccgccgaaattcgccaaggcgagc gtgagggtcgcggtgcgggacgagaacgacaacgccccggccttcgggcggccgtactac gccctggaggcgcccgagaacctggagccggtggagctgttcacgctgcgggccaccgac ctggacgcgggttcgagcggagaggtggagtacaggatcacagctggagacccggcgggt gatttccggctggataagagctcgggggtgctgtggaccgcgcgggctctggaccgggag cggaaggcccggtacgccctgacggtcgtggcccaggaccgcggcagcccccccctcagc ggctccgccaccgtggacgtggccgtcctggacgtcaacgacaacgggccgcgcttcgac agcgccggctacgcggcggaggtgcgtgaggacgccgcggcggggtctctggtgctgcag gcctcggccgcggacgaggacgcgggctccaacggcgaggtgctgtacttcctgagcggc gaggcgggcggcgccttcgccgtcgacccggagacgggccgcgtcaccaccgccgccgcg ctggaccgcgagaagcgcgcctcctacagcttccgcgtgtgcgccaccgaccgcgccccc gccgcgccccgcaacgccagcgcccccgtcaccgtccacgtcctggacgtcaacgacaac gcgcccttcttcgtccaggacccgctggtcatcaacgtgtccagcggcggcggcggcggc ggcacgggccggcaggtggtggccaccatgagggccgaggacaaggacttcggcgccaac ggctcggtgttctaccgcttcgccagcccggcgcgcggcttcgccatcaactcgctgacc ggcgacatccaggtgagcgagcggcacctggccctgtcccagagccagcgcacgctcatc gtggaggccatggaccagggcagccccgcccagtcttcgcttggggttgtgctcgtctac gtcaaggagcaggagtaccggggcatccgcttctcccgaaacgcccgggacgtcagcctc caggagaacgccgccaaaggcacagcagtcgtgcagacgcaggcgcagtaccccgacggc acccgcagcggcatcaactacagcatcttcagcggcaacagactgcagtccttccgcatc agccccacaacaggtgagatctgggtacagagctcgactggcctggattttgaggaaaac cccagactccgcctagtggtgaaagccgaaactgcgtcctccagctcctacatggccgtc aacctgatcctgcaggacgtcaacgacaacctcccccgcttccagctgcagaactacgtg gcgtacatccgggagtcccagggctacgatttccccatcattcaggtcctggcagatgac ctcgaccagggtcagaatggtcaggtgacctactccatcaaatcgtccagcatgagcggc ctgttcaggatcgaccccctgaccggcagcatcagcacggcggccatcatggacagagag atctggacacagacaaagctggttgtcacggcgacggaccggggcagccccagacttgcc ggctctgccacgctgacggtgatcatcgtggacctcaacgacaacagccccacgatcccg ctgccgcgcgagattcgcgtgccggagaacaccctgattggcacagagatcacccaggtg acgggaaacgacgtggactcgggccccgccctctcctacaccctgcagctggacggccac gcccgggggaagtttgggatacaccgctacggcgggggcgtgtccctgacggccccgctg gacttcgaggagaggacctggtacaccctcaccgtccgggcctccgactccaggcaccag agcgaggccaacctgaccgtgctggtggaggacgtcaacgacaacgcgcccgtcttcacc caggacctgtaccaggtaacgctgctggagcattccccgccaggcagtccggtgatcacg gtaacggccacggaccgcgactcgggggagaacgggaaggtcacctacagagtgatgtca tcaacgagggacggctttcacattgaccccagcaacggcaccctgtttttcaaccggagg gtggagtttgaccccaagcggcctgccatcaccgtggtgatcgaagcccgggacggcggc accccggccctgtcctccattgctaccgtccaggtccaggtgtccgacgtcaacgacaac gcccccctcttcccccagtcggaatactgggccaccgtgcccgaggacagcctcccgggg gccaccgtactgaccctggaggcggtggacggggacccgtcccgcgagaactgcggcttc gacttcgccatcgccagcggcaacgcgggcgacgccttccagatcgagagcagcgtgcgc ttcctggaggggcggggcttccagacggtgggcacgctgatcctggcgcagcggctggac ttcgaggcggcgcggctctacaacctgacggtggtggcgtccgaccgcggggtcccccag cgcagctccagcgtctcggccgtcgtcgccgtcgccgacgccgacgacaacccgcccgcc ttcggccgcgccgagtacgcggtggcgctgagcgagggcgcggccgccggcaccgagatc ctgcgcctgaccgccaccgacccggactccgcgcccaacgccgaggtccgctacgccatc agctccggagacgacacggggctcttctccgtggacccgggcacgggcgccctccggctg cagcgggccctggaccgcgagggacagcctcaccacaccgtcattgtgcaggcctcggac gggcgcggccactacgcgctggcgcccgtcaccgtggaagtcaaagacgtcaatgacaac aggccttacttcccgctgaagacgcttaccgccagcatccgcgagaaccggcccgccgac agccccgtcaccgtgctgcacgccatagaccacgacgcgggcgtgtacggccagctgcgc tactacatggtggacaaggcaggcgaagggaaggagtccttcctcgtcaatcagacctcg ggggaggtccgagcgcgccgcacgttcgacttcgagaaggccagctccttcagcttcgtg gctctggccgtggacgcgggcaactactccgccacggtgaccgtgcaggtttacgtgacg ggcgaggacgagtacgacccggtcttcgccgcctccgatttgtcattggaggtgcccgag ggggccaggaaagggcagagcatcgggcaggtgcaggccagcgacgaggacgagggcgtg gacgggatcgtgctgtactccctggccgagagctcgccctacttcgaggtgaacaggacc acgggcgtcgtctctctgaaggtggacggttccggaaggcacggcggctcgggacgcgcc aagagggaggcgcggcagatgaccctggacgtgacggcgcggggccctctggagagctct cgctcggccaccgcgcgcctcaccgtcgacgtcacccgcacctccttcggcctggcgacc gacgtcaacatcctgctcgtcagcggcgtagccgcgtccctcggggccatcgtcatcctg gcggtcgtcgcggtcgccctcttcctggccagctcccggcggcgcaagaaggagcgggag gcccgaaacagagcgaccgccccgggcactgccctccagaagctggaagagtccaaagtc acggggccgagcgacaggatctaccaccaggccctgcccgggtacgccagcgaccaggcc gggtcggccgtgggaccctacacccgcgggggatccctggacccctcccactccagtggg cggggctcggcggacgcggaggcggcagaggacgacgagatccggatgatcaacgagtac ccccgcgtgtccagcatctcctcctccatgcaggagcacatctccgcccgcgggcccgac tcgggcatccagcaggacgccgaccagctttcggacatctcctgcgagcccggcgtggag gcggggggccagtggttcaaggggaagaagctggggagcctcagcgggaccctgctctcc ggccagcaccccgtctaccgggacgagggcggggggtacctgggcgtgggccggggcctg agcatctcccatcccaaggactacgcctttcccgaggacggcaagccggcggtggacggc tcgctgaccgccatcgtggccagcgacgaggagctgcgcggcagctacaactgggactac ctgctcaactggtgcccgcagttccagccgctggccaacgtcttcaccgagatcgcccgg ctcaaggacgagaacgctccgcccggtaacccccggcgaccgttccagcccaaggccaag gccgaccccaagccccggatcgacccgcccccgctcatcacctccgtggcccacccgggg gccaagtccgtgccccccaaacccgccgtcgggaggacgttcccccacctggcgtccctg cgacggtcgcccatcagccacgagggctccatctcctcggcggccatgtcgcccagcttc tcgccgtccctctcgccgctggccacccgctcccccgccgtctcccccttcggcgtcacc cagggcccctcggcccacatgatcagcaccaccgagcactccctggagcacagcgaggag gccgagctcaggatttaa

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