Anguilla rostrata (American eel): 135236747
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Entry
135236747 CDS
T10705
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03440
Homologous recombination
arot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135236747 (brip1)
03460 Fanconi anemia pathway
135236747 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arot03400
]
135236747 (brip1)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135236747 (brip1)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
135236747 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
135236747 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
135236747
NCBI-ProteinID:
XP_064159330
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All DBs
Position
12:complement(7671598..7691425)
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AA seq
1178 aa
AA seq
DB search
MAAPSVEYTIGGVKIGFPCKAYPSQLAMMNSIVRGLNHGQHCLLESPTGSGKSLALLCSA
LAWQQAQHAKAQEDGSPKEAGKKPDMTTPCQCACHATPPRIPSVPEPRPPVVDLTTPDKK
EGGAAADAPPEEYTPRRSSLASRLAQKVQASLAAEDDDDFLPDRKRVRTPAADQKAPAAC
SLCPCAACPAGRKAPEKGKDQETEGGATKKKKSVPKIFFGTRTHKQIAQVARELKRTLYS
GAPMTILSSRDHTCVNPEVTARPNRNEHCKELLDGKNGQTCRFYHSVHKMQDQNTLQWVH
GLHQAWDIEELVRLGGRLRACAYYAARELMQDASIVFCPYNYLLDPLIRESMEINLKGQV
VVLDEAHNIEDCARESASYTVEQGQLLAARDDIDAMVTYNVRPAHHQPLRAFCCSLLNWV
QDSCSALQEREYESSCKVWTGTEVLGIFHGLGITPATFPMLQKHLAAVLEKEERVGVVNG
REDTVQVPTISSPTQAVLKSLFMVLEFLFRNNCRFAEDYRVALQQTYAWTTQPDLPDAHG
FFARPQRRRRSNRTKTLVHTLSFWCLNPAVAFSDLTDSVHTIVLTSGTLSPMGSFSSELG
VHFSIQLEASHVINRSQVSRRSNCDVTGECGVAWHYVRTFQDGCVRPRWRLLWVCQTVGH
GVLCFLPSYKMLDKLRDRWTNTGLWEKMEERKTVITEPRGGAKGDFDELLQTYYSAIRSP
GDREGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELNLCRCIRHKNDWG
ALILVDDRFRCNPNKYITGLSKWVRQLVQHHNTFSDAIQSLASFSQCQQGAAASQANGPG
PEPCSAPLPPPSSSPAVCPPPQLEQRDPPTAVAPPTGRQTSGDPAASDDCHARERRRAPR
PARGGGASEGGARARAPPSSPRPVHPFFTSTPVCTPFRTPLFKAWGGPDCGQGGAPRPGD
SGTDRVGGARGGSPAADRDRGGDCGGQEGAGPDPSCADLGLSPVRAPPCGQPQKDTSAVT
VLDEEEDEDQSVCFTPEMFEDEEEEKEVAGDKEEDRPPPPRQVPPGAEPDPPGLSPPLSD
GAVRASSEDLFGGAPATPPAVADAVAAVSVAAVSGQAGVRDSSGQEVPTQQPGREANRRT
HRLSRSRQKGVPPSAGKLTSYFPSLSPASPSHVIHIED
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccctcagtggagtacactattggtggggtgaagataggcttcccctgcaag
gcgtacccctcccagctggccatgatgaactctatcgtgcggggcctgaaccacgggcag
cactgtctcctggagagccccacgggcagtggcaagagcctggccctcctctgctcagcc
ctggcctggcagcaagcccagcacgctaaagctcaggaggacggcagccccaaggaggcg
ggcaagaagccagacatgaccacgccctgccagtgcgcctgccacgccactcctcccaga
attcccagcgttcccgagccgcggccgcccgtcgtggatctcacaaccccggacaaaaag
gaggggggcgctgccgcagacgcccctcccgaggagtacacgccccgaagaagctccctg
gcgtcccgcctggcccagaaggtccaggcctcactcgccgccgaggatgacgacgacttc
ctgcccgacaggaagcgcgtgcgcacccctgccgcagatcagaaggcccctgcggcctgc
tcgctgtgcccctgcgccgcctgcccggcggggcggaaggcgccggaaaagggcaaggac
caggagacggagggcggggccacgaagaagaagaagagcgtccccaaaatcttcttcggg
acgcgaacccacaagcagatcgcgcaggtggcccgggagctgaagcgcacgctgtactcc
ggcgcgcccatgaccatcctgtccagccgcgaccacacctgcgtcaaccccgaagtgacc
gcgcgccccaaccgcaacgagcactgcaaggagctgctggacggcaagaacggccagacg
tgcaggttctaccacagcgtgcataagatgcaggaccagaacacgctgcagtgggtgcac
gggctgcaccaggcctgggacatcgaggagctggtgcgcctgggggggcgcctgcgcgcc
tgcgcatactacgccgcccgcgagctcatgcaggacgccagcatcgtcttctgcccctac
aactacctgctggacccgctcatcagagagagcatggagatcaacctgaaggggcaggtg
gtggtgctggacgaggcccacaacatcgaggactgcgcccgcgagagcgccagctacacc
gtggagcagggccagctgctggccgcccgcgacgacatcgacgccatggttacctacaac
gtccgccccgcccaccaccagccgctgcgcgccttctgctgcagcctgctcaactgggtg
caggacagctgcagtgctctgcaggagagggagtatgagagctcctgtaaggtgtggact
gggacagaggtgctggggatcttccacggcctgggaatcacacctgccaccttccccatg
ctgcagaagcacctggcggctgtgctggagaaggaggagcgggtgggcgtggttaacggg
cgggaggacacggtgcaggtccccacaatcagctccccaacgcaggccgtgctcaagagc
ctcttcatggtgctggagtttctgttccgcaacaactgcaggtttgcggaggactaccgc
gtggcgctgcagcagacctatgcctggaccacgcagccggacctgcccgacgcccacggc
ttcttcgcccgcccccagcgccgtcgccgcagcaaccgcaccaagaccctggtgcacacg
ctcagcttctggtgtctgaaccctgctgtggctttctcagacctgactgactcggtccac
accattgtcctgacctccggcacgctgtcccccatggggtccttctcctccgagctgggc
gtccacttctccatccagctggaggccagccacgtcatcaacagatcccaggtcagtagg
cgaagcaattgtgatgtcacaggtgagtgtggggtcgcttggcactacgtgcgcaccttc
caggacgggtgcgtgcgcccgcggtggcgcctgctgtgggtgtgccagaccgtgggccac
ggggtcctctgcttcctgccgtcctacaagatgctggataaactgcgtgatcgctggact
aacacaggcctctgggagaagatggaggagcggaagactgtgatcaccgagcccaggggg
ggggccaagggcgacttcgacgagctgctgcagacctactacagcgccatccggagtccg
ggggacagggagggggcgctgctgatcgctgtgtgcagggggaaggtcagtgaggggctg
gacttcacggatgacaacgcccgcgccgtggtgaccatcggaatccccttccccaacatc
aaagacctgcaggtggagctgaatctatgcaggtgtatccgacacaagaacgactggggt
gctcttatactggttgatgaccgcttcagatgtaaccccaacaaatacattacaggtctg
tccaagtgggtgcgtcagctggtgcagcaccacaacaccttcagcgacgccatccagtcg
ctggcgtcattctcgcagtgccagcagggggcagcggctagccaggcgaacgggcccggc
cctgagccctgctccgcccccctcccccctccctcgagcagtcctgccgtgtgcccgcct
ccccagctcgagcaacgggacccccccacggcagtagccccccccacagggagacaaacc
tcaggtgacccggcggcttcggacgactgtcacgcacgcgagcgacgccgagcgccacgc
ccggcccgcgggggtggggccagcgagggcggggctcgggcccgggcccccccctcgtcg
ccgcggcccgtccaccccttcttcacctccacgcccgtctgcactcccttcaggacgccc
ctgttcaaggcctggggggggccggactgcgggcagggcggggccccccgcccgggggac
agcgggacagatcgggtgggaggggccaggggaggcagcccggcagcagacagggatagg
ggcggggactgtggggggcaggaaggggcggggccggacccatcgtgtgcagacttgggt
ctctcccctgtgagggctcccccttgtggccagccccagaaagacaccagcgcggtgacc
gtcctcgacgaagaggaggacgaggatcagtccgtgtgcttcacgccagagatgtttgag
gatgaggaggaggagaaggaggtggcgggcgataaagaggaggatagaccccccccaccc
cgccaggttccccccggggcagaaccggaccccccaggcctgtctccgcccctctctgac
ggggcggtccgggcgtcgtccgaggacctctttggaggcgcgccggccactcccccggct
gttgctgatgcggttgccgcggtatctgttgccgcggtatcggggcaggccggtgtgagg
gatagctcgggacaggaagtccccacgcagcagccgggcagggaggccaatcgcaggaca
cacaggctctccaggtctagacagaaaggtgttcccccgtccgcaggtaaactcacctct
tacttcccctctctctccccagccagcccctcccacgtcatccacatagaagattag
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