Anguilla rostrata (American eel): 135236773
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Entry
135236773 CDS
T10705
Symbol
col4a3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04510
Focal adhesion
arot04512
ECM-receptor interaction
arot04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135236773 (col4a3)
Glycosaminoglycan binding proteins [BR:
arot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135236773 (col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135236773
NCBI-ProteinID:
XP_064159375
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Position
12:complement(15545566..15583769)
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AA seq
1672 aa
AA seq
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MIRAVHSPIAFSVFLLGLWCCGIPATVRSENECICNRASRCHCDGVKGNKGEMGYPGFDG
PPGESGFPGIEGRPGPVGPKGDIGFPGPPGPKGSLGRDGSPGFFGAPGLPGSPGNAGPMG
LPGIPGCNGTKGDSGSPGFPGVPGPVGLPGLNGETGPKGDTSYMPHYVDVKGERGPPGPN
GVKGPHGTPGLHGPPGPMGPHGYPGFPGLRGVPGEKGREGLRSVPAPRGLKGNRGDRGLP
GEKGVKLYLLGQNELKGMPGDPGEKGCAGMPGRPGRHTRDPEKGDQGEPGPEGKPGKTGN
PGYGGIKGEKGESGNSGPPGIEGSTGDKGDRGPVGPPGEVQYRDVFIKGQQGLPGPPGPP
GPKGYPGVSGFPGQTGPPGLPIPGLQGSPGYPGSSGLKGDTGDPGPYVRGSPGPSGTPGP
VGSPGDPGPPGRPDVAKGRPGPPGVRGPKGSGGPPGMQGNFGSRGEKGDCCRLCPLTEAE
PGPPGPPGVHGMPGCDGEPGDPGPEGYKGSKGLRGPVGPPGPYGESGRKGFPGPKGDKGF
SDEIGQKGEIGFAGLHGFPGSSGVDGPPGYPGPKGWQGPKGNPGLPGPKGDIGPLGLSGP
PGCQGQLGGPGPTEMGPEGFPGPKGDRGVQGLYGRPGDPGEKGSQGTTVPSPGDPGPRGE
RGVSGNPGPPGDPGPTGFRGLPGTFGSKGDMGSYEHGPPGDPGVKGDKGQPGKPGEASVG
PPGRRGPNGASGNPGPKGDISFGPPGPTGRQGSPGEEGALGPSGNMGPQGPPGCAGTPGS
EGPAGEQGPPGYTGMPGLPGPAGICSPGCEGSQGPAGQKGYRGPTGQTGRKGRTGDPGDP
GEGFEGMVGGFGPPGINGTQGSVGPAGLKGFRGQDGFPGASGRVIRKGTLGSLDRARGHP
GPTAKNEENNTNFGCVIGLMGTDGAKGAKGCKGVVGAKGHQGPGGPPNDIVVKGLPGDPG
PAGLQGRTGTKGDPGDPGPGGPCGKNGPPGSPGPQGPPGDPGVDGNPGGPGFSGSPGFPG
KDGLLGLKGQKGVGGAAGEPGSRGTPGSNGHKGDKGQPSLPGPGPKGLQGEKGVPGSPGQ
KGNKGHRGISGNVGPEGSRGPPGPQGDPGYPAYPGSPGPPGDKGNYGLSGLPGAPGPNGP
PGVTGNAGDPGRQGNKGNQGLDGIPGPVGEKGDMGVVGIGNPGETGPKGPTGQKGDPGDP
GPFGPPGPRGPLGETGPCGPPGPPGSTGRLGQDGMCFSGTKGERGRIGAVGRPGPRGSCG
PPGPPGPGFKGDKGDPGAPGQEGLPGERGDVGLPGRNGGDGKNGLRGPKGESGTLGPTGP
SGVTGDSRARGPPGPQGNEGPPGPPGPKGDDVFRDVIFIPGDQGHPGTEGLYGEQGPPGE
PGPVGFPGRPGPKGATGPEGVSGNPGPQGPKGDRGPPGQSGLQGFLGLQGSKGIRGQPGD
HFSGPRQDSFLFTRHSQKQQEPQCPDGSNFIYSGYSLIYINGNSRGHGQDLGTLGSCLLR
FSTMPFLYCNPDSTCHYASRNDYSYWLSTDEQAPTDAPLIPAESVERYISRCSVCETSAS
LIPVHSQTNEIPECPRGWRSLWTGYSFLMQTGAGAEGSSQPLASPGSCLEKFTKVPSLEC
HGRGTCNYYRDSYSYWLASLDPNNMFSQPVPWTVREDAPGSLISRCRVCMKL
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtgcagtccactcaccgatcgcatttagcgtttttctgctggggctttggtgt
tgtgggattccagcaacagtgcgctcggagaatgagtgtatctgtaacagggcatccagg
tgtcattgtgatggagtgaaaggcaacaagggagagatgggatacccagggtttgatggt
cctccaggagaatctggtttcccagggattgaaggtcgtcctggaccagtaggcccaaag
ggagacattggctttcctggacctccaggacctaaaggctcactggggcgtgatgggagt
ccaggattctttggagcaccagggctgccaggctcccctggaaatgcaggacctatgggg
ctccctggaatcccaggatgcaacgggacaaaaggtgacagcggatctcctgggttccct
ggagtgcctggaccagttggactgccaggtttaaatggagaaactggacccaagggggac
accagctatatgccacattatgtggatgtgaaaggagaacgtggtccaccagggccgaat
ggtgtgaagggcccccacgggacaccaggcctgcatggccctccggggcccatgggaccc
catggttatccggggttcccagggttacgcggtgtgccaggtgagaagggtagagagggg
ttgaggagtgtcccagcgccacgaggtctgaagggaaacagaggcgatcgtggactacct
ggtgaaaaaggagtaaagttatatctgcttggacaaaatgaactgaaggggatgccaggt
gacccaggagagaagggctgtgctggaatgcctggtcgtcctggaagacacacgcgtgac
ccagagaaaggcgaccaaggagagcctggccctgagggaaaacctgggaagactggtaat
ccagggtacggtggcattaagggggaaaaaggagaaagtggcaactctggccctccagga
atcgagggttcaacgggcgataaaggagacagaggtcctgttgggccaccaggggaagtg
cagtacagggacgttttcatcaaagggcagcagggattacctggccctccaggacccccg
ggcccaaaaggttacccaggtgtgagtggtttccctggacaaactggcccaccagggtta
cctatccctggccttcaggggtcgcccggttaccctggctcttctggcctgaaaggggac
acaggcgacccgggcccttatgtcaggggctcccctggaccgagtggaactcctggaccg
gttggttccccgggagatcctgggcctcctggaaggccagatgttgcaaagggccgccca
ggaccccccggagtacggggccccaaaggcagtggaggccccccaggaatgcagggcaat
ttcggaagtcgcggtgagaagggtgattgctgcagactctgtccgcttacagaagccgaa
cctggaccgcccggcccaccaggggtccacggcatgcctggatgtgatggtgaaccagga
gatccagggcctgaaggatataaaggaagcaaaggtctgaggggtccggttggtcctccg
ggaccctatggtgagtcaggacgaaaaggttttccaggacccaagggtgacaaaggcttc
agtgatgagattggacagaagggggagattggatttgcaggccttcatggatttccagga
tcgagtggtgtggatgggccccctgggtacccaggaccaaagggttggcagggtccaaag
ggaaatccgggattacctgggccgaaaggagacattggcccccttgggctctctgggccc
ccaggatgtcaagggcagttggggggaccgggccccactgaaatggggcctgaagggttt
cccggaccgaagggagatagaggggttcaaggcctttacgggagacctggagacccagga
gagaaagggtcgcaaggcacaacagtgccaagcccaggtgatccgggtccgaggggtgag
aggggcgtctcaggcaatcccggaccaccaggtgatcctggccccacaggattcagaggt
ctgcctggcacttttggcagcaagggtgacatgggttcctatgagcatggtccccctgga
gaccccggggtcaaaggtgacaaaggccagccagggaagccaggtgaagccagtgtgggg
cccccaggaagaagagggccaaacggagcctctgggaatccagggccaaagggtgacatt
agttttgggccccccggcccaacaggcagacaagggtccccaggggaagaaggtgctctt
gggccttcaggtaatatggggccacagggtccacctggatgtgctggaacacctgggtca
gaaggccccgctggggaacaaggtcccccgggttatactggtatgccaggattgccaggt
cctgctgggatctgctcacctggatgtgaggggtcacagggtccagcaggtcagaaaggc
tacagaggccccactggtcaaacaggacggaaaggaaggacgggggacccaggtgaccca
ggggagggctttgaaggcatggtaggcggctttggccctccagggattaacggaacacag
ggatcagtgggacctgcggggctgaagggtttcagaggacaagatggcttccctggagct
tcaggcagggtgatccggaaagggactttgggcagcctggatagggccaggggacatcca
gggccgactgccaagaatgaagagaacaacactaattttggctgtgtgatagggctcatg
ggcactgatggagcgaagggtgcgaaggggtgtaagggagtcgtgggggccaaaggacac
caaggacctggaggaccccctaatgacattgttgtcaaagggctccctggggatcctgga
ccagcggggctacaggggcgcacaggcactaaaggggatccaggagacccgggacccggt
gggccttgtgggaaaaatgggcccccaggaagtcctggtccacaagggcctcctggtgat
ccaggtgttgacgggaaccctggaggtccgggtttctctggtagccctggtttcccgggc
aaggatggcttacttggtctgaaaggtcagaagggggttggtggggctgctggagagcct
gggtcacgtgggacaccaggttcaaatggacataaaggggacaaaggtcaaccaagccta
cctgggcctggtcccaaaggactgcaaggagaaaagggtgtaccaggctccccaggtcaa
aaaggaaacaaggggcacagaggcatttcgggtaacgtggggcctgagggctcccgtggt
cctccaggaccccaaggagacccgggctacccagcatatccaggatccccagggccgcca
ggggacaaagggaattatggactttcaggacttcctggcgctcctggtcccaatggccct
ccaggagtcacagggaacgctggagatcctggtcggcagggcaacaaaggcaaccagggc
ctcgatggaatcccaggccccgtgggagagaagggcgacatgggtgttgttggaatagga
aacccaggtgaaacaggcccaaagggtccaacaggccagaaaggagaccctggagatcct
ggcccctttgggccccctggtcccagaggccccctcggtgaaactgggccctgtggcccc
cctggcccccctggcagcactggccgcctcgggcaggacggaatgtgttttagtgggacg
aagggcgagcgagggcgtataggcgctgtggggagaccagggccgcggggctcctgtggg
cctccaggacctccagggccagggtttaaaggagacaagggggatccgggggccccgggg
caagagggtctgcctggggaaagaggtgacgttgggttgcctgggagaaatgggggagat
ggtaaaaatggtttgcgagggccgaaaggtgaatctgggacattaggaccaacaggacca
agtggtgtgacaggagactccagggcgcggggtccgcccgggccccaaggaaatgagggg
cccccagggccaccaggaccgaagggcgacgatgttttcagagatgtaatattcatcccg
ggggaccaaggtcatcccgggactgaaggactgtatggggaacagggaccgccaggagag
ccaggcccagtaggatttccaggacgcccgggtcctaaaggtgccactggcccagaaggg
gtttctgggaacccagggccccaaggaccaaagggtgacagagggcccccaggacagtca
gggctgcaggggtttctgggcctccagggctctaagggtatccgtgggcagccaggagac
catttctcaggcccaaggcaggacagcttcctgttcactcggcacagccagaagcagcaa
gagccacagtgtcccgacgggagcaacttcatctactccggctactccctcatctacatc
aacggcaacagcagaggacacggccaagacctaggcactctgggaagctgtctgctccgg
ttctccaccatgccctttctgtactgcaacccagacagtacctgtcactacgcttcccgc
aacgactactcctattggctgtccactgacgaacaggcgcccactgacgcgccactcatc
ccggctgaatcggtggagagatacatcagcaggtgttcggtgtgtgagaccagtgccagt
ttaatccccgttcacagccagaccaatgagattccagaatgcccccgtggatggcgctct
ctgtggacaggctactccttccttatgcaaacaggcgcaggagctgagggctctagccag
ccgctggcttcgccagggtcctgtctggagaagttcactaaagtcccttccctggagtgc
cacgggcgtggaacctgcaactactacagggactcctacagttactggctggcctctctc
gaccccaacaacatgttcagccagccggttccttggacggtgagggaggacgccccaggg
agcctgatcagccgctgccgcgtgtgcatgaagctgtga
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