Anguilla rostrata (American eel): 135236985
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Entry
135236985 CDS
T10705
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04270
Vascular smooth muscle contraction
arot04625
C-type lectin receptor signaling pathway
arot04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135236985 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135236985 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
135236985 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arot04131
]
135236985 (arhgef12a)
Membrane trafficking [BR:
arot04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135236985 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
135236985
NCBI-ProteinID:
XP_064159724
LinkDB
All DBs
Position
12:14784534..14829557
Genome browser
AA seq
1402 aa
AA seq
DB search
MSGIQATVSDRPSSLLTTDPPDKKLLSHEFDTTGLVQRCVIIQKDENGFGLTVSGDNPVF
VQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLSH
IPLAEGDGERGSILTSPNSPGQAGEDCFPSPRPAWEENSNVLSQKVDILQKMLSKAQRDL
QVLKEEHGRNPSPKLLKEIHEANKHIPQLQRQLSKAMGGGQDGAPLGEVEEGSVGQTDQQ
LPLRAFGSTDGPWTGSTAPPVTHGLSDSAYQRDSGQSPKTTPRDGLNCPSSDAEDTPDQD
GSATPHLGSPAPRLFPDIIVPEEEYFDAEQEQEQVNGQCSCFQNIELLKARPAHLAAFLH
HVVSQFDPAPLLCYLYAELYKQTSSKDTRRIFMELNTFFMDRAANLKVPVPETISSDLER
RRPDLIPEDLHRQYVQLLQDVLLTDIQKNLEDFRQKRSMGLTLADGELNRLDAEQVRDRA
ALERERSCAEQIVSKIEDVLLTSSPSEEDKCATMQFVILTYMKHLGVKVKEPRSLEPKRV
RINFLPKIKGMQKGVKTEKEGEEKVKRTRFSNILGGPPRRLNRMDSASTAVEMSKQRPQK
QLSQPALSTPEHPDGARARGSQSSEGSDLSFPPALVTSPTHSAAAVLSSEGGGRDPDTGF
TPSSAFPKLSEGLTGGDALDSATHAPNTLFDFSLSSPDQLPEDERESDRAVEGGTPRPIR
RTDTLCAAEVQSEDDQERDAEQDPPNWQQLVGREVLASLTPHEIKRQEVINELFYTERAH
LRILKVLDSVFYQKLTRDTILPPVDIKRIFTNLEEIIQLHGSIAEQMTTIRKKSETVIGH
IGEDLLSWFGGSEEEKIKRAVGTFCSNQPFALELIKSRQKKDARFSSFMQEAESNPVCRR
LQLKDMIPVEMQRLTKYPLLLENIAKYTDDAEEKEKVKRAGECCRKILNYVNQAVKEAEN
KQRLEDYQRRLDLSSLKQSEHPMIAEFKNLDLTKRKMVHEGPLSWKINKDKTIELYTLLL
EDILVLLQKQDERLVLRCHSKNLAGTADTRHIFSPIIKLNTVLVRSVATDNKSFFVLSMS
DNGAQIYELMAQTVSEQRTWQCQITQRADSIKSKEHNDILLPQPDGEREALDMMNSAVPR
LSKDPDRNSTASVQSPERDGSASSPRLKQAPPPGPNPFEEEPEEEEPAFLDSDLTDRLPF
LKRGSRQGLAIGDDESNLFSIPPSRAEEALKTLAALKQVLLAQEDWWRGERPAGARLQRT
TSLRTSAVPVSHAAAAAALSSPENGRDERLQDRSAGDTGYFEASDDYTGYVVLEGLGESS
TEEEVSGKEQGAAGDSGIDMKKLLSSAAQPGGAPSFTRQVLTHLRLLQVNLQHLKEVETK
YNELYQRQARQTAETEDNRGKS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatacaggctacagtgagtgacaggcccagcagtcttctcactactgaccct
cctgataagaagcttctgtcgcacgagtttgacacaacagggctcgtgcagagatgtgtg
atcattcagaaagatgagaatggctttggcctgaccgtgagcggagacaaccctgtgttt
gtgcagctggtcaaagaagatggcgctgcgatgcgggcgggagtgcagacaggtgacagg
atcattaaggtgaacgggaccttagtaacacattcaaaccatgtagaagttgtgaagttg
atcaaatccggctcctatgtggccctcacagttctgggacggcccccggggctctcccac
atccccctagccgaaggggatggggagaggggatccattctcacctccccaaactctcca
ggacaggcaggagaggactgtttcccctccccccggcccgcttgggaggagaacagtaat
gtgctcagccagaaggtggacatcttgcagaagatgctgtctaaggcacagagagatctg
caggtgctgaaggaggagcacggcaggaaccccagtccgaagctcctgaaggagatccac
gaggcaaataaacacattccacagctccagcgccagctcagcaaggccatgggaggagga
caggatggggcgcccctcggtgaggtggaggagggcagcgtgggccagacggaccagcag
ctccctctgcgggctttcggcagcactgacgggccctggaccggcagcacagcgccccct
gtcacgcacggtctctcggacagcgcgtaccaaagagactccggccagagcccgaagacc
acgcccagggacggcctgaactgcccctcctccgacgcggaggacacgcccgaccaggac
ggctcggccacgccccatttgggaagccccgccccccgactcttcccagacatcatcgtt
cctgaggaggagtacttcgacgcggagcaggagcaggagcaggtcaacggccagtgcagc
tgctttcagaacatcgagctcctgaaggcccgccccgcccacctggctgcctttctgcat
catgtggtctcgcagtttgaccccgcccctctgctgtgctacctgtatgctgagctgtac
aaacagaccagctctaaagatacacgccgcatattcatggagctgaacaccttctttatg
gaccgagcagcaaacctgaaggtgccagtgcccgagaccatctcctccgacctcgagcgg
aggaggccggacctcatcccagaggacttgcacaggcagtatgtgcagctgctgcaggac
gtcctgctcacggacatccagaagaacctggaggacttcaggcagaagcgcagtatgggg
ctgactctggcggacggtgagctgaacaggctggatgcagagcaggtcagagaccgggca
gcgctggagagagagcgctcctgtgcggaacagatcgtctccaagattgaggatgtgctg
ttgacttcatctccgtcagaagaggataagtgcgccaccatgcagtttgtcatcctgacc
tacatgaagcacctgggggtgaaggtgaaggagcctcgcagcctggagcccaaacgcgtc
cggatcaacttcctccccaaaatcaagggcatgcagaagggcgtgaaaacggagaaggaa
ggggaggagaaagtgaagaggactcggttttccaacatcctcggaggccccccccggcgg
ctcaaccgcatggactccgcgtccaccgccgtggagatgagcaagcagcgccctcagaag
cagctgtcccagccggccctgtccacccccgagcaccccgacggggctcgcgcccgcggg
agccaatccagcgagggctcggacctgagcttcccccccgccctggtcacctcccccacc
cacagcgccgctgccgtcctgagctctgagggagggggcagagaccccgacaccggcttc
acaccctcctctgccttccccaaactgagtgaggggctgactggcggggacgccctggac
agtgcaacacacgcccctaacacactcttcgacttcagcctctccagcccggaccagcta
ccggaggacgagcgagagagcgacagggccgtggagggtgggacgcccaggcccatcaga
aggacggataccctgtgtgcagcggaggtacagagcgaggacgatcaggagcgggacgct
gagcaggaccccccaaactggcagcagctggtggggagggaggtcctggccagcctgaca
ccccacgagatcaagagacaggaagtcatcaatgagctgttttacacagagcgtgctcac
ttacgcatccttaaagtgctggacagcgtcttctatcagaaactgaccagagacacgata
ctgccccctgtggacatcaagcgcatcttcaccaacctcgaggagattatccaacttcac
ggctcgatcgcagagcagatgaccaccatacggaagaagagcgagaccgtgattggccac
ataggagaggacctgctgtcctggttcggcggcagcgaggaggagaagatcaagcgggcc
gtcggcaccttctgcagcaaccagcccttcgccctggagctgatcaagagccggcagaag
aaggacgcccgcttctcctccttcatgcaggaggcggagagtaatcctgtgtgtcgcaga
ctgcagcttaaggacatgatcccagtggagatgcagagactcactaagtacccgcttctg
ctggagaatatcgccaagtacacagatgatgcggaggagaaggagaaggtgaagagggca
ggtgaatgctgtaggaagatcctaaactatgtgaaccaggctgtgaaggaggcagagaat
aagcagaggctggaggattaccagagacggctggacctgtcctccctgaagcagagtgaa
caccccatgatcgctgagtttaagaacctggatctgactaagaggaagatggtgcacgag
ggccccctgtcctggaagatcaacaaagacaagaccattgagttgtacaccctcctgctg
gaggacatcctggtcctgctgcagaagcaggacgagcgtctcgtcctcaggtgccacagc
aagaacctggcgggcacggccgacacccggcacatcttcagccccatcatcaagctcaac
actgtgctggtgcgctccgtcgccacagataacaagtcgttctttgtgctctccatgtcg
gacaacggagcgcagatctacgagctgatggcgcagaccgtgtccgagcagagaacgtgg
cagtgtcagatcacgcaaagagcagactccatcaagtccaaagaacacaacgacatactt
ttacctcagccagatggggagagagaggccttagacatgatgaacagcgccgtgcccagg
ctcagcaaagaccccgaccgcaactcgaccgcaagtgttcagtccccagagagagacggc
agcgcatcatctcccaggctgaagcaggcccctccccctgggcccaacccctttgaggaa
gagccagaggaggaggagccggcgttcctggactcggacctgacggacaggctgcccttc
ctcaaacgggggtcacgtcagggccttgccatcggtgacgatgaatccaacctcttcagc
atcccgccctccagggctgaagaagctttaaaaaccttggcggcgctgaaacaggtgctc
ttagcgcaggaggactggtggaggggggagaggcccgcgggggctcgtctccagaggacc
acgtctctgcggaccagcgccgtccccgtgtcccacgccgccgccgccgccgcgctcagc
tccccagagaacggccgagacgagcggctccaggaccgctccgctggggacaccggctac
ttcgaggcctccgatgactacacaggttacgtggtgctggagggcttgggggagagcagc
acagaggaggaggtcagcgggaaggagcagggcgcagcaggggattctgggatcgacatg
aagaagctgctgtcctcggcagcgcagccagggggcgcccccagcttcacccggcaggtc
ctgacgcaccttcgccttctgcaggttaacctgcagcacctaaaggaagtggagaccaag
tataatgaactttaccaaaggcaggccaggcagactgctgaaacggaggataacagaggc
aagagttag
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