Anguilla rostrata (American eel): 135239172
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Entry
135239172 CDS
T10705
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135239172 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135239172 (prpf4)
Spliceosome [BR:
arot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135239172 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD_LRWD1
WD40_like
Beta-prop_WDR11_1st
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
135239172
NCBI-ProteinID:
XP_064163730
LinkDB
All DBs
Position
14:24474852..24486010
Genome browser
AA seq
507 aa
AA seq
DB search
MSDDEDVPVAKKTRIFYGSLEEKERERLAREGSASSGKEAVKAGIEAGNINISSGECMEM
EERVSERQAEVLAEFERRKRARQITVSTDDAEVKACLRALGEPITLFGEGPAERRERLRN
ILSVVGPDALKKSKKEDEKGKRSQEECQQTWYHEGPTSLKEARLWLARYSLPRAVKRLDA
ARAQKEIPESSRTVRQQELHKTLRGLNNFCSQIGDERPISSCQFSPNSKLLVTASWSGLC
KLWAVPDCSLVRTLRGHNTNVGAISFHPQATLSLDAADVNMASCATDGSVKLWSLDSDYP
MSRAERHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEAQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDSFGRIWDLRTGRCVMFLEGHLKEIYAIDFSPNGFHVATGSGDNTCKVWD
LRQRKCIYTIPAHQNLLSSVKFQPTDGHYLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKV
MGLDVSADGQLIATCSYDRTFKLWVSE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaggatgtccccgtggcgaagaaaacccggatcttctatggcagcctg
gaggagaaggagcgggagcggctggcccgcgagggttcggccagctctggcaaggaggcg
gtgaaggcggggattgaggccggcaacatcaacatctccagcggcgaatgcatggagatg
gaggagcgtgtcagcgagcggcaggcggaggtgctggctgagtttgagcgcaggaagcgg
gcgcggcagatcaccgtctccaccgacgacgccgaggtgaaagcctgcctgcgggctctg
ggagagccaatcacgctcttcggggaggggcctgctgagagacgagagaggttgaggaac
atcttgtctgtggtgggaccagatgccctgaagaaatccaaaaaggaagacgagaaaggg
aagcgctctcaagaagagtgccagcagacctggtaccatgaaggccccacctctttaaag
gaagctcgtctgtggttggctcgctactctctgcccagggccgtgaagaggctggatgca
gctcgcgctcagaaggagatccccgaatcttcccggaccgtgcgtcagcaggagctccac
aagacgctgaggggcctgaataacttctgcagtcagattggggacgagagacccatctcc
tcctgccagtttagccccaactccaaactgctggtgacggcgtcctggagtggtctctgt
aagctctgggcagtccctgattgcagccttgtccgcactttaaggggacacaacaccaac
gtgggggccatcagtttccacccccaggccacactgtctctggacgccgccgatgtcaac
atggcctcttgtgcgactgacggatcagtgaagctctggagtctggacagtgactatccg
atgagccgtgccgagaggcactcgatgcgggtggcacgcgtggcctggcacccctccggg
cgcttcctgggcaccacctgttatgataactcctggaggctgtgggatctggaggcgcag
gaggagatcctccaccaggagggccacagcaagggggtgcacgacctgcacttccacccc
gacggctccctggcagggaccgggggtctggactcgttcggccggatctgggacctgcgg
acggggcgctgcgtcatgttcctggagggccacctcaaagagatctacgccatcgacttc
tcacccaacggctttcacgtggcgacaggaagtggagataacacctgcaaggtctgggac
ctccggcagaggaagtgcatctacaccatccccgctcaccagaaccttctgtcctcagtg
aagttccagcccactgacggtcactacctcctgaccggagcgtacgacaacacggccaag
gtgtggacgcaccccggctggtccccgctcaagacgctggcggggcacgaggggaaggtg
atggggctggacgtgtcggctgacggacagctcatcgccacctgctcgtacgaccgcacc
ttcaaactctgggtctccgagtga
DBGET
integrated database retrieval system
