Anguilla rostrata (American eel): 135239385
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Entry
135239385 CDS
T10705
Name
(RefSeq) serine/arginine-rich splicing factor 9-like isoform X1
KO
K21123
serine/arginine-rich splicing factor 9
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
arot05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135239385
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135239385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135239385
Spliceosome [BR:
arot03041
]
Common components
Common spliceosomal components
SR proteins
135239385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
Nup35_RRM_2
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135239385
NCBI-ProteinID:
XP_064164066
LinkDB
All DBs
Position
14:complement(1106855..1116269)
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AA seq
247 aa
AA seq
DB search
MADGRIYVGNLPPDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDCKLRVEYPRSSSKFSSPMGGGPRGRFGPPSRRSEFRVIVTGLPPTGSWQDL
KDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDRTEFRSHQGETAYIRVHEERG
SSWGRSRSRSRSRGRYSPPYQSRASPPPRYHSPPPRRHSSRHSPPSRHSPPSRHSPPSHH
SPPRHYR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggaggatctacgtggggaaccttccgccggacgtgcaggagcgggacata
gaggacctgttcttcaaatacggaaagatccgcgacatcgagctgaagaacaaccgcggc
accatccccttcgccttcgtccgctttgaggacccccgggacgcagaagacgccgtgtat
ggacgcaatggctacgggttcggcgactgcaagctccgtgtggagtacccgcgctcgtcc
tccaagttcagcagccccatgggagggggcccccggggccgctttggccccccctcccgg
cgctcagagttccgcgtaattgtgacaggcctccccccgacgggcagctggcaggacctg
aaggaccacatgcgggaggcgggggacgtgtgcttcgctgacgtgcagcgggacggcgag
ggcgtggtcgagttcctgcgcagagaggacatggagtacgcgctccgccgcctcgacagg
accgagttccgctcgcaccagggggagactgcttatatccgggtgcatgaggagaggggt
tccagctgggggcgctcacggtcccgctccaggtcgcggggtcgttactctcctccttac
caaagcagggcctccccgcccccccgctaccattcccccccacccagacgccactcctcc
cgccacagccccccctcacgccacagccccccctcacgccacagccctccctcacaccac
agcccaccccgccattaccgataa
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