KEGG   Anguilla rostrata (American eel): 135239984
Entry
135239984         CDS       T10705                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
arot  Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:arot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arot03400]
    135239984 (mdc1)
DNA repair and recombination proteins [BR:arot03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    135239984 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT PTCB-BRCT
Other DBs
NCBI-GeneID: 135239984
NCBI-ProteinID: XP_064165111
LinkDB
Position
1:71983302..72002910
AA seq 1898 aa
MTSLANRMDETQKLEDSFLEEEDEVAEEKDTGKEREPLAKLRVFNNEHFPETELPLFLGD
NVLGRDPASCSLPLPARSVSKRHAVISITRLRDDGRRDDGATEALVWDLGSMNGTRKGRL
RLTPHVRYALGEGDVVVIADLPCQFVRAGEGGAGREAGAPAAAATGRGRGGPRRIARGCV
SDSDSEGEISVRKERRAKLFVPDSDSPRESSLSCSTFLTPTSRFVPDSEEESSITPSSSG
RLDRSRTGKTPKHVSDSDPDDEEEEEEEEEEEAGTNSHVDCAAKTPNAEPSGARPPVEPG
RNEAAFKIRDSESDTDAEGEESAGNTPGASGDKAVLPEAGPSTGPAARPEDFHLDSDTDA
EDEADAATASVPASVPARDQNAKPPAAVQQTDFHLDSDTDAEDEADATTASVPTSVPARD
QNAKPPAAVQQTDFHLDSDTDEEDEAEGTAGSAPGESAGPPETAAGKPAELHYDSGTDAE
DAAVGPEPPSAAAPQGLAILSDSDPDAEEDGVAPPRAAAARRPDSQTPAPGAGPAAAAAR
LESDSDTDLEELDSAELQPKSEPHPRDFNLDSDTDVEDAEDAEDGGGAEGSAGLAEKPVS
STPRGSALEEDELETQPFSSTSDPFRRPSAPPPLEPKPLDGSQEDSGDEDLVFAPTQCFE
PEGQRSSPAGDPALDATQPFPLDPSAAEGSEDQPTQAFSFRLGLSHCSEATQAYGPAESE
DDSELEATQAYGEAPPTWGERERLEKEREEREEKERLEKDRKEREEEERLEKERKEREEK
ERLESEKKEREEKERLEKEKKEKEEKERLEKERKEREEKERLAKERKEREEKERLESEKK
EREEKERLEKEKKEKEEKERLEKERQEREEKQRLEKERKEREEKERLERERKEREEMERL
EKERKEKEEKERLENERKEREEMERLEKERKEKEEKERLDKERKEREEKKRMEKEKMERE
KRERLEKEKSEREEKERVEWEKGEREEKERAEKEKREREESERLEKEKEEKAEKEQVEKE
RKDRQENESAEVGDEPVPEQGRRSRRSSVSSVSSERSNSSTSVPARGRGRRTQRKTGSQT
DPVPIPGQQEEPPAPKPSGRGRGRRSMKESAPGSAGTQRDLDSVRPDAVRKDDPNLRAPR
GMSRGRRAIDSHPGATGASQSAPDVKTAEPEGSTKTRGRSCKVSSSDSTATEMTRTAEPV
EPKFVETPAPTTNRTRGRSRKVNDLNSTAAEVDQSTEILETPGVETPAPKENSRARGRSR
KIGDSGSTTTEVEQTTDSVQAPSVETPAPKANSRARGRGRKVNDLDSTSAETDKTVEPAA
TTNEETPSVGTATAKESSRARGRSRKMIDSDSTATEVEQTTDSVQAPSVETPAPKASVET
PTPKANSRARGRGRKVNDLDSMSAEIDKTVEPAETTNEETPSVGTATAKESSRARGRSRK
MIDSDSTATEVEQTTDSVPAPSVETPAPKASVETPTPKANSRARGRGGKISDSAIATTEA
AQTAEAVGTGAKAEPSKSTGRDRGQKRALEVEGEEVSGSFKVPRGRSRRGGRGAGEQEEQ
EVHEEEEDTEPSPPLSKARGPSTQGKRGQQKEDEEAKGLSVQKMERSKQTLALSKEEAEE
EDRTDEVQTEDAVSAPSSEEQDVPRTPTGRSVRKRAAPGESPPAAKTPRRSVASAPSPEA
GGQSRAVAQAHKVLFTGLTDTSGEAVVARLGGSLARGVSDMTHLVTDKVRRTVKFLCAVA
RGVPIVTTDWLEKSGRRGSFLPPSEFLVKDAEQEKKFSFRLEQSLLTAHAQPLLQGYEVH
VTRSVKPDPAQMRDIVSCSGARYLPKMPTVLKPQTVVVSCVEDASLCIPALSARIPVVSA
EFLLTGILQQKADPLGHALSGPGFEPGAKGGAKGRKRK
NT seq 5697 nt   +upstreamnt  +downstreamnt
atgacatctttggcaaacaggatggatgaaacccaaaagctggaggactctttcttagaa
gaggaggatgaggtggctgaggagaaggacacgggaaaagagagagagcctctggccaaa
ctcagagtcttcaataatgagcactttccagagactgaacttcccctcttcctcggggac
aacgtgctgggccgtgaccccgcctcctgcagcctgcccctccccgctcgctccgtgtcc
aagcggcacgccgtcatctccatcacccgtctccgcgacgacgggcgccgcgacgacggc
gcgacggaggccctcgtgtgggacctgggcagcatgaacggcacgcggaagggccggctt
cggctgaccccccacgtgcgctacgccctcggggagggggacgtcgtggtcatcgccgac
ctgccctgtcagttcgtccgcgctggggagggaggggccgggcgcgaggcgggagcgccg
gccgcggcggcgacggggagaggaagaggcgggccgagaagaatcgccaggggctgcgtg
tcggattccgactccgagggagagataagcgtgaggaaagaaaggagggcgaagcttttc
gtgcccgactcagactcgcctcgagaatccagtctctcctgctctactttcctcactcca
accagcagatttgtcccagatagtgaggaggagagctccatcactccctcttcctcgggg
cgactggaccgatctagaaccggcaagaccccaaaacacgtctcggacagtgaccccgat
gatgaggaggaggaggaggaggaggaggaggaggaggcgggaacgaactcgcatgtcgat
tgcgccgctaagactccgaatgccgagcccagtggagcacgcccgcccgtcgagcccggc
agaaatgaggccgccttcaagatccgcgattcggagagtgacacggacgcggagggggag
gagtcagcagggaacacccccggcgcttcgggagataaggccgtcctcccggaggcggga
ccatcgacaggccccgcggcgcgtcccgaggacttccatctggacagcgacacggacgcg
gaggacgaggcggacgccgcgaccgcgtctgtgcccgcgtctgtgcccgcgcgggatcag
aacgcaaaaccgcccgccgccgtacagcaaacggacttccatctggacagcgacacggac
gcggaggacgaggcggacgccacgactgcgtctgtgcccacgtctgtgcccgcgcgggac
cagaacgcaaaaccgcccgctgccgtacagcaaacggacttccatctggacagcgacacg
gacgaggaggacgaggcggagggtaccgccggttcagctcccggggagagcgccggcccg
cccgagactgccgccggtaaacccgcggagctgcactacgacagcggcacggacgcggag
gacgccgccgtcgggcccgagccgccctcggccgccgcgccgcagggcttggccatcctc
tccgacagcgacccggacgcggaggaggacggtgtcgccccgccacgcgccgccgcggcc
cggcggcccgattcccagacgcccgcgcccggcgccggcccggcagcggctgccgcccgt
ttggagtcggacagcgacaccgacctggaggagctggactccgccgagctgcagccaaaa
tccgagccccacccccgagacttcaacctggacagcgacacggacgtggaggacgcggag
gacgcggaggacggagggggggcggaggggagcgccgggctggcggagaagcccgtgagc
tccacgccgcggggatcagccttagaagaggatgaattggagacccagcctttcagcagc
acctcggaccccttcaggcgtccctctgcccctccgccgctggagcccaagccgctcgat
ggcagccaggaggactcgggcgacgaggacctcgtctttgccccgactcagtgctttgag
cctgaaggacagaggagcagtccggcaggggaccccgcgctggacgccacccagcccttc
cccttggacccctctgctgccgagggctcggaggaccagcccacccaagccttctccttc
cggctgggcctgtcccactgcagcgaggccacccaggcctatggcccggcggagtcggag
gacgactccgagctggaggccacccaagcgtacggggaagcccctcctacctggggggag
agagaacgactggagaaggaaagggaggaaagagaggaaaaggaaagattggagaaggac
aggaaagaaagggaggaggaggaaagattggagaaggaaaggaaagaaagagaagagaag
gaacgattggagagtgaaaagaaagaaagggaggagaaagaaagattggagaaggaaaag
aaagaaaaagaagaaaaggaaagattggagaaagaaaggaaagaaagggaggagaaggaa
agattggcgaaggaaaggaaagaaagagaagagaaggaacgattggagagtgaaaagaaa
gaaagggaggagaaagaaagattggagaaggaaaagaaagaaaaagaagaaaaggaaaga
ttggagaaggaaaggcaagaaagagaggaaaagcaaagattggagaaagaaaggaaagaa
agggaggagaaggaaagattggagagggaaaggaaagagagagaggagatggaaagatta
gagaaggaaaggaaagaaaaagaagaaaaggaaagattggagaacgaaaggaaagagaga
gaggagatggaaagattagagaaggaaaggaaggaaaaagaagaaaaggaaagattggat
aaggaaaggaaagaaagagaagagaagaaaagaatggagaaggagaaaatggaaagggag
aagagagaaagactagagaaggaaaagtcagaaagagaagagaaggaaagagtggagtgg
gaaaagggagaaagggaagagaaggaaagagcggagaaggagaaaagggaaagggaggag
agcgaaagactagagaaagaaaaggaagaaaaggcagaaaaagaacaagtggagaaggaa
aggaaagacaggcaggaaaatgaaagcgcggaggtaggggatgagcctgtgcctgagcag
gggagaaggtcccgtcgtagttctgttagctccgtcagctcagagaggtccaactccagc
accagcgtgccggccagggggagggggaggaggacccagaggaagaccgggtcccaaacc
gatcctgtccccatccccggtcagcaggaagagccccctgcccccaagcccagcgggagg
gggcgggggaggagaagcatgaaggagagcgctcctggctctgcggggacgcagagagac
ctggactctgtgcgccctgacgccgtacggaaggacgatcccaacctgagagcacctcga
gggatgagccggggcaggagggccatcgactcccatccaggggcaacgggggccagccaa
agtgcaccggatgtgaagactgcggagcccgagggcagcaccaaaaccaggggcaggagt
tgcaaagtaagcagttctgattcaaccgcgacagaaatgactcgaactgcagaaccagtg
gagccgaagtttgtggaaacccctgcacctacgacaaatagaacaaggggtaggtctcgt
aaggtaaacgatctgaactcgacagcagcagaagtcgaccaaagtactgagatcttggaa
actcctggtgtggaaactcctgcccctaaagaaaacagtagggcgaggggtaggtctcgt
aaaataggcgattctggctcaacgacaacggaggtagaacaaactactgacagcgtgcag
gctccaagtgtagaaactcccgcacctaaagccaacagtagagcaaggggtaggggacgt
aaagtgaatgatttggactcaacgtcagcagaaacagacaaaacagtagagccggctgca
actacaaatgaagaaactccaagtgtaggaactgctacggctaaagaaagcagtagagca
agggggaggtctcgtaaaatgatcgattcagactcaacggcaacggaggtagaacaaact
actgacagcgtgcaggctccaagtgtagaaactcccgcacctaaggcaagtgtagaaact
cccacacctaaagccaacagtagagcaaggggtaggggacgtaaagtgaatgatttggac
tcaatgtcagcagaaatagacaaaacagtagagccggctgaaactacaaatgaagaaact
ccaagtgtaggaactgctacggctaaagaaagcagtagagcaagggggaggtctcgtaaa
atgatcgattcagactcaacggcaacggaggtagaacaaactactgacagcgtgccggct
ccaagtgtagaaactcccgcacccaaggcaagtgtagaaactcccacacctaaagccaac
agtagggcaaggggtaggggaggtaagattagtgatagtgccatagcgacaacggaagca
gcccaaactgcggaggctgtgggaacaggtgcgaaggctgagccctctaaaagcactggc
cgagacagggggcagaagagggctcttgaggttgaaggggaggaggtgagcggctctttc
aaagtgcccaggggcaggtcgcggaggggtggaagaggagcgggggagcaggaggagcag
gaggtacatgaggaggaggaggacactgaacccagtccacctctgagtaaggcgagaggg
ccttctacgcaggggaagaggggacagcagaaggaggatgaggaagccaagggtctttca
gtccagaaaatggaacgaagcaagcagaccctggccctgagtaaggaggaggctgaggaa
gaggacaggacggatgaagtacagactgaagacgccgtctctgctcccagctctgaagag
caggatgtgcctcggactcctacggggagaagcgtccggaagcgggcggccccaggcgag
tccccgcccgccgccaagacgcctcgccgctccgtggccagcgccccctcccccgaggct
gggggtcaaagcagagccgtcgctcaggctcataaggttctgttcaccggtttgacggac
acgtcgggtgaggctgtggtagcgcgtctcgggggcagcctagccaggggcgtcagcgac
atgacccacctggtgacggacaaggtgcggcgcaccgtcaagttcctgtgcgccgtggct
cgcggcgttcccatcgtcaccaccgattggctggagaagagtggcaggaggggcagtttc
ctcccgccctcggagttcctggtgaaggatgcggagcaggagaagaagttcagcttccgt
ctggagcagtccctgctcaccgcgcacgctcagccactcctccagggctacgaggtccac
gtgacgcgctcggtcaagcccgacccggcccagatgagggacatcgtgtcctgcagcggg
gcccggtacctccccaagatgccgaccgtgctcaaacctcagacggtggtggtgtcctgt
gtggaggacgcctctctctgtatcccggccctgtccgcccgcatccctgtggtcagcgct
gagttcctgctcacgggcatcctgcagcagaaggcggacccgctcggccacgccctctcc
ggtcccgggttcgagccgggggccaagggcggggccaaggggaggaagaggaagtga

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