Anguilla rostrata (American eel): 135240018
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Entry
135240018 CDS
T10705
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135240018 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135240018 (tnpo1)
03009 Ribosome biogenesis [BR:
arot03009
]
135240018 (tnpo1)
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135240018 (tnpo1)
Ribosome biogenesis [BR:
arot03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
135240018 (tnpo1)
Pre-60S particles
135240018 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
TOR1L1_N
Vac14_Fab1_bd
Arm
IBN_N
TPR_IPO5
Cnd1
HEAT_EF3_N
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
Adaptin_N
CEP104-like_TOG
HEAT_GCN1_C
MMS19_C
Dopey_N
INTS7_N
UNC45-central
TPR_TTI1_C
VPS15-like_hel
RTP1_C1
ARM_TBCD
Replitron_HUH
Motif
Other DBs
NCBI-GeneID:
135240018
NCBI-ProteinID:
XP_064165179
LinkDB
All DBs
Position
14:complement(8779193..8824420)
Genome browser
AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQTFPNGVSDFIKNECLQNIGDASPLIRATVGILITTIASK
GELQNWPELLPKLCTLLDSEDYNTCEGAFGALQKICEDSAEILDSDILDRPLNIMIPKFL
QFFKHSSPKIRSHAIACVNQFIICRTQALMLHIDSFIENLFALAGDEESEVRKNVCRALV
MLLEVRMDRLLPHMHNIIEYMLQRTQDQDENVALEACEFWLTLAEQPVCKDVLGGHLSKL
TPVLVNGMKYSEIDIILLKGDVEEDEAIPDNEQDIRPRFHRSRTVAQQHEADGIEEDDDD
DDDLDDDDTISDWNLRKCSAAALDVLANVFRDDLLLHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLVQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNSQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
LISVCNNATWAIGEISIQMGAEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAVA
SWVNPKDDLRDMFCKILHGFKNQVGDENWRRFADQFPLPLKERLAAFYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgagtggaaaccagacgagcaaggacttcaacaaattttacagcttctgaaa
gagtcccagtctcccgatacgtccacacaaagatccgtccaacaaaaactggaacaatta
aaccagtatcccgactttaacaactacttgatatttgtgctaacgaagttaaaatctgaa
gatgagcccacgagatccctgagtggtctcatactgaagaacaacgtgaaggcgcactac
caaaccttccccaatggcgtttcggacttcatcaagaacgagtgcctgcagaacattggg
gacgcatccccactcatccgagccactgtgggtatcttgatcacgaccattgcctccaag
ggagagctgcagaactggccggagctgctgcccaagctgtgcaccctcctggactccgag
gactacaacacgtgcgagggggcgtttggtgctctccagaagatatgcgaggattcggcc
gagatcctggacagtgacattctggaccggcccctgaacatcatgatccccaagttcctg
cagttcttcaagcacagcagtcccaaaatcaggtcccacgccatcgcctgcgtcaaccag
ttcatcatctgccgaacccaggcgctcatgctccacatcgactctttcatcgagaacctg
tttgctctggcgggcgatgaggagtccgaggtgaggaagaacgtgtgccgggcgctggtc
atgctgctggaggtccgaatggaccgcctcctcccgcacatgcacaacatcatcgagtac
atgctccagcgcacccaggaccaggacgagaacgtggcgctggaggcctgcgagttctgg
ctgaccctggcggagcagcccgtgtgcaaggacgtgctaggcgggcacctctccaagttg
actccggttcttgttaatgggatgaagtactctgagattgacatcatcctcctgaagggc
gacgtggaggaggacgaggcgatcccggacaacgagcaggacatccggccgcgtttccac
cgctcgcggacggtggcccagcagcacgaggcggacggcatcgaggaggacgacgacgac
gacgacgacctggacgacgacgacaccatctccgactggaacctgcggaagtgttctgca
gccgccctggacgtcctggccaacgtgtttcgggacgacctgctgctgcacatcctgccc
cttctgaaggagctgctctttcaccccgagtgggtcgtcaaggagtccggcatcctggtg
ctgggtgccattgctgaaggctgcatgcagggcatgatcccatacctccccgagctcatc
ccccacctggtccagtgcctctctgacaagaaggccctggtgcgctccatcacctgctgg
acgctcagccgctacgcacactgggtggtcagccagccgcccgacacctacctgaagccc
ttgatgaccgagctgctcaaacgcatcctggacagcaacaagcgcgtccaggaggcagcc
tgcagtgcctttgctactctggaggaggaggcttgcacagagctggtgccctacctcgcc
tacattctggacaccctcgtcttcgccttcagcaagtaccagcacaaaaacctgctcatc
ctgtacgatgccatcgggaccctggccgactccgtcgggcaccacctcaacaagccggag
tacatccagatgctgatgcctcctcttattcagaaatggaaccagctgaaggacgaagac
aaggatctcttccctttacttgagtgcctgtcctctgtggccactgccctgcagtctggc
ttcctcccatactgtgagcccgtgtaccagcgctgcgtcaacctggtgcagaaaactctc
gcccaggccatgctccacaactcgcagcccgaccagtacgaagcgccagacaaagacttc
atgatcgtagcgctggacctgctgagcggcctggccgagggcctgggaggaaacatcgag
cagctggtggcacgcagcaacatcctcacgctgatgtatcagtgcatgcaggacaaaatg
ccggaggtgcggcagagttcgtttgccttgctgggtgatttaaccaaggcttgctttcag
cacgtgaagccatgtatcgcggattttatgcctattctgggtactaatctcaacccagaa
ttaatatcagtgtgcaacaatgcaacatgggcaatcggggagatatctattcaaatgggc
gctgaaatgcagccctacatagccatggtgttgcaccagctggtggagatcattaaccga
ccaaatacccccaagacattgttggagaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggctcccatgctacagcagtttataagaccctggtgcacctct
ctacgcaacataagagacaatgaggagaaagattctgcttttcgaggaatctgcactatg
atcagtgtcaatccgggaggtgtggttcaggactttatatttttctgtgacgcagtggcc
tcatgggtcaatccaaaagacgatctacgagacatgttctgcaagatcctccatggattt
aagaaccaggtgggagatgagaattggaggagattcgcagaccagttccctctgccctta
aaagagcgcctggccgccttttatggagtgtaa
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integrated database retrieval system
