Anguilla rostrata (American eel): 135240130
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Entry
135240130 CDS
T10705
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135240130 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135240130 (nup54)
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135240130 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
LPP
Motif
Other DBs
NCBI-GeneID:
135240130
NCBI-ProteinID:
XP_064165492
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All DBs
Position
14:complement(20876757..20891297)
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AA seq
579 aa
AA seq
DB search
MAFNFGGGATNTASSSGFSFGSFAAKTTASTGFGFGTTTTTASSGFGSLAAPGFGATTTT
APSTGFGFGSTTTGFGGLGAGSTTAGAFGGFGTATTSAAPGSTFSFAAPSNTGGLFGNTQ
NKGFGFSGLGAGTTAGTGFGTGLGTGLGTGLGTGLGTGLGFGGFNIQPQQQQGGLFGQQA
QASAQSNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQEN
PFCRFKAVGYSCAPGSKDEDGLVVLALNKKEVDVRSQQQQLVESLHKLLGGHPTLTVNVE
GVKALPDDQTEVVIYVVERSPNGTSKRIPATTLFSYVEQANIKPQLQQLGVVMSVTRTEL
SPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQDQMTKQHQ
TRVDIISNDVSELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEE
HLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDAELLREIKQHLK
QQQEGLSHLISVIKDDVEDIKLIEHGLHDSVHMRGGMLS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaactttggcggtggtgctaccaatactgcgagctcttcaggattttcattt
ggttcatttgctgccaaaacaacagcctctactggttttggctttggcaccaccaccacc
actgcctcatctggatttggtagtcttgccgccccagggttcggggccaccaccacaacg
gctccttccactggctttggtttcggttccacaactacaggatttggggggctgggagcc
ggcagcaccaccgccggtgcatttggaggctttgggacggccactacttctgccgcaccg
gggtctactttcagtttcgctgctccctcaaacacagggggtctgtttggaaacacccag
aataagggctttggcttctcggggctgggtgccggtaccactgccgggactggtttcggc
actggcctcggaaccggcctcggtaccggtctcggaaccggccttggaaccggtctcggg
tttgggggcttcaacatccagccacagcaacagcaggggggattatttggccagcaggcc
caggcgtctgcccagtccaaccagctgatcaacacagccagcgccctgtccgcgcccacg
ctgctgggggacgagcgcgatgccatcctggccaagtggaaccagctccaggccttctgg
ggcactggcaagggctatttcaacaacaacatcgcacctgtcgagttcacacaggagaac
cccttctgcaggttcaaggcagtgggctacagctgcgctccaggcagtaaggatgaggac
ggcctggtggtcctggctctgaataagaaggaggtggacgtgcgcagtcagcagcagcag
ctggtggagtcgctacataagttgctgggaggacacccgaccctcactgtcaacgtggag
ggggtcaaagcactgcccgacgaccagacggaggtggtcatatacgtggtggagcgctct
ccgaacggcacctccaagaggatcccggccaccacgctcttcagctacgtggagcaggcc
aacatcaaaccgcagctgcagcagctgggcgtggtcatgtccgttacgcgcacagagctg
tcgcctgcgcagctgaagcagctgctgcagaacccgccagccggtgtggatccaattata
tgggaacaggcgaaggttgacaaccctgatcctgaaaagttgattccagttccgatggtt
ggtttcaaagaactacttcgcaggctcaagatccaggaccagatgacaaagcagcaccaa
actcgtgttgatataatctccaacgacgtaagtgagttacagaagaatcaggctacgaca
gtggcaaagatcgcacagtacaagaggaagctgatggacctttctcacagagtactacag
gtcttgattaagcaggagattcagaggaagagtggctatgccatccaggtggatgaggaa
catctgcgggtgcagctggacaccattcagtctgaactcaacgcccccactcagtttaag
ggccggctgaacgagctcatgtctcagatccggatgcagaaccacttcggtgcggtgcgg
tccgaggagcgctacagcgtggacgccgagctgctgcgcgagatcaagcagcacctgaaa
cagcagcaggagggcctgagccacctcatcagcgtcatcaaggacgacgtggaggacata
aagctgatcgaacacggtctccacgacagcgtgcacatgaggggcggcatgctcagctga
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