KEGG   Anguilla rostrata (American eel): 135240130
Entry
135240130         CDS       T10705                                 
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:arot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    135240130 (nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arot03019]
    135240130 (nup54)
Messenger RNA biogenesis [BR:arot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     135240130 (nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C LPP
Other DBs
NCBI-GeneID: 135240130
NCBI-ProteinID: XP_064165492
LinkDB
Position
14:complement(20876757..20891297)
AA seq 579 aa
MAFNFGGGATNTASSSGFSFGSFAAKTTASTGFGFGTTTTTASSGFGSLAAPGFGATTTT
APSTGFGFGSTTTGFGGLGAGSTTAGAFGGFGTATTSAAPGSTFSFAAPSNTGGLFGNTQ
NKGFGFSGLGAGTTAGTGFGTGLGTGLGTGLGTGLGTGLGFGGFNIQPQQQQGGLFGQQA
QASAQSNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQEN
PFCRFKAVGYSCAPGSKDEDGLVVLALNKKEVDVRSQQQQLVESLHKLLGGHPTLTVNVE
GVKALPDDQTEVVIYVVERSPNGTSKRIPATTLFSYVEQANIKPQLQQLGVVMSVTRTEL
SPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQDQMTKQHQ
TRVDIISNDVSELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEE
HLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDAELLREIKQHLK
QQQEGLSHLISVIKDDVEDIKLIEHGLHDSVHMRGGMLS
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggcgttcaactttggcggtggtgctaccaatactgcgagctcttcaggattttcattt
ggttcatttgctgccaaaacaacagcctctactggttttggctttggcaccaccaccacc
actgcctcatctggatttggtagtcttgccgccccagggttcggggccaccaccacaacg
gctccttccactggctttggtttcggttccacaactacaggatttggggggctgggagcc
ggcagcaccaccgccggtgcatttggaggctttgggacggccactacttctgccgcaccg
gggtctactttcagtttcgctgctccctcaaacacagggggtctgtttggaaacacccag
aataagggctttggcttctcggggctgggtgccggtaccactgccgggactggtttcggc
actggcctcggaaccggcctcggtaccggtctcggaaccggccttggaaccggtctcggg
tttgggggcttcaacatccagccacagcaacagcaggggggattatttggccagcaggcc
caggcgtctgcccagtccaaccagctgatcaacacagccagcgccctgtccgcgcccacg
ctgctgggggacgagcgcgatgccatcctggccaagtggaaccagctccaggccttctgg
ggcactggcaagggctatttcaacaacaacatcgcacctgtcgagttcacacaggagaac
cccttctgcaggttcaaggcagtgggctacagctgcgctccaggcagtaaggatgaggac
ggcctggtggtcctggctctgaataagaaggaggtggacgtgcgcagtcagcagcagcag
ctggtggagtcgctacataagttgctgggaggacacccgaccctcactgtcaacgtggag
ggggtcaaagcactgcccgacgaccagacggaggtggtcatatacgtggtggagcgctct
ccgaacggcacctccaagaggatcccggccaccacgctcttcagctacgtggagcaggcc
aacatcaaaccgcagctgcagcagctgggcgtggtcatgtccgttacgcgcacagagctg
tcgcctgcgcagctgaagcagctgctgcagaacccgccagccggtgtggatccaattata
tgggaacaggcgaaggttgacaaccctgatcctgaaaagttgattccagttccgatggtt
ggtttcaaagaactacttcgcaggctcaagatccaggaccagatgacaaagcagcaccaa
actcgtgttgatataatctccaacgacgtaagtgagttacagaagaatcaggctacgaca
gtggcaaagatcgcacagtacaagaggaagctgatggacctttctcacagagtactacag
gtcttgattaagcaggagattcagaggaagagtggctatgccatccaggtggatgaggaa
catctgcgggtgcagctggacaccattcagtctgaactcaacgcccccactcagtttaag
ggccggctgaacgagctcatgtctcagatccggatgcagaaccacttcggtgcggtgcgg
tccgaggagcgctacagcgtggacgccgagctgctgcgcgagatcaagcagcacctgaaa
cagcagcaggagggcctgagccacctcatcagcgtcatcaaggacgacgtggaggacata
aagctgatcgaacacggtctccacgacagcgtgcacatgaggggcggcatgctcagctga

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