Anguilla rostrata (American eel): 135240162
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Entry
135240162 CDS
T10705
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arot03021
]
135240162 (chd1)
03036 Chromosome and associated proteins [BR:
arot03036
]
135240162 (chd1)
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
135240162 (chd1)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
135240162 (chd1)
SLIK complex
135240162 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
135240162
NCBI-ProteinID:
XP_064165567
LinkDB
All DBs
Position
14:3358200..3394578
Genome browser
AA seq
1846 aa
AA seq
DB search
MDGRSEEDSVSNSSAESSNSDDESGSGSGSGSGSGSSSSSSSSSSQSGSSDSGSGSDSGS
QSDSDSEKSKEKSQPENKPAKIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQQPQN
QQQSSSDSGSDEDSSSSDDSDDDSSNQTKRKRKHKGSDSGSDSGSGSGSDSSSGSGSGSD
SSDEAENSDETVSDYEPSHKVKSRKPPNKASVRNGKKGKAQRKKASGSGSGSSSDEDEFD
KAKLSGPRRQATVNVSYKEDEEMKTDSDDLVEVCGEDVPQPEEDEFETLEKVMEMRTGRR
GATGGTTTVYAVEADGDPNGNFNPAKEPGEHQYLIKWKGWSHIHNTWETEETLKLQNVKG
MKKLENFKKKEQEKRKWIKAASPEDVEYYNCQQELMDDLHSQYQIVERIIAHSNQKSAAG
YPDYLCKWQGLSYSECSWEDGALLSRKFQRCIDDYMCRNQSKTIPSRDCKVLKQRPRFVP
MKKHPTYIGGEGLELRDYQQDSLNWMAHSWCKGNSCILADEMGLGKTIQTICFLSYLFNE
HQLYGPFLLVVPLSTLTSWQREIQLWAPHMNVVVYLGDISSRSMIRTHEWMHPQNKRLKF
NILLTTYEILLKDKSFLGNVNWAFIGVDEAHRLKNDDSLLYKTMMEFKSNHRLLITGTPL
QNSLKELWSLLHFIMPEKFHSWELFEQDHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSL
PAKVEQILRVEMSAIQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIK
PPEDNEFYNKAEALQHLIRSSGKLILLDKLLLRLKDRGHRVLIFSQMVRMLDILAEYLKS
RQFLFQRLDGSIKGEMRKQALDHFNAENSEDFCFLLSTRAGGLGINLASADTVVIFDSDW
NPQNDLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKT
VLHTGSAPSSSTPFNKEELSAILKFGAEELFKEQEGEEQEPQEMDIDEILKRAETRENDP
GPSTVGEELLSQFKVANFSMMEEEEMDMDSDRNHRGWEHIIPEEQRRRLEEEERQKELEE
IYLLPRMRNCAKQVNFNGNEGRRSRNRRYSGSDSDSVSDRKRPKKRGRPRTIPRENIKGF
SDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEYDLKRLAETVHNGCIKTLRENPCG
PEKTSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPADPEERKRYTIPCHSK
AAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTR
ADYLIKLLSRDLAKKEAQRQAGTANSRKRKPRNKKNKVVKPKVEEVVKSDSSPTPSEKSS
EEEEEEEEEEEEEKEEEKEVLPLKTSSRRAKVERVAKEPEEDPVPEVVPKKEPEEKEIKE
KEIKKEGKKEKKEEVRETKDKKEAKKKEEKEAKPVEPAYRKEDIKEEKITEVKVEIRESK
SKKAADTPVHITASGETVPASEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSERE
QLEHTRQCLIKIGDHITECLKEYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIK
KRQENAQAADHNTSTVNTTHSFKHTDVERLKDNSQHDDSSRDSYSSDRHHSSRYAEHGKD
RHAPDPYRKGSDSRDSRKRPYSSFSNGKDHRDRDRDRDRDRDHYRSERPDSRYYSDKHRK
MDDLRSSRDHRLEGGAKERSHGDRRSHSSDRRSGSDYAHHKSSRDYRYHSDWQMDHRASG
SGPRSPRDQRSPYESRSPPGHRARSPFEYSSDHKSTPEQVWCGRKT
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcgtagcgaggaggacagtgtgagcaacagcagtgcagaatcaagtaactct
gacgacgagtccgggtccgggtcgggctccgggtccgggtcggggtccagctccagcagc
agcagcagcagcagccaatcgggaagcagcgactcggggagcgggtcggactccggcagc
cagtcggactccgactcggagaagtccaaggagaagagccagccggagaacaagcccgcc
aagatcgatggggcggagttctggaagtcgaaccccagtatcctggctgtacagcggtcg
gccatgctcaggaaacagcagctccagcagcagcagcagcagcagcaacagccacagaac
caacagcagagctcttctgacagtggctcagatgaggattcgtccagcagcgatgactcg
gacgatgactcctccaatcagacgaagaggaaaagaaagcacaagggatcggactcgggg
tctgattccggttccgggtccggttctgactccagttcggggtccgggtccggctcggac
tcctcggacgaagctgagaactcggacgagaccgtctctgactacgagccgagccacaaa
gtcaagagcaggaagccccctaacaaggccagcgtccgaaacggaaagaagggcaaagcc
cagcggaagaaggcctcgggctcgggctcggggtcgtcgtccgacgaggacgagttcgac
aaggccaagctgtcggggccccggcgccaggcgaccgtcaacgtgagctacaaggaggac
gaggagatgaagacggactcggacgacctggtggaggtgtgcggggaggacgtgccgcag
cccgaggaggacgagttcgagaccctggagaaggtgatggagatgaggaccgggaggaga
ggagccacggggggcaccaccacggtgtacgcggtggaggcggacggggaccccaacggg
aacttcaacccggccaaggagccgggcgagcaccagtacctgatcaagtggaaggggtgg
tcccacatccacaacacctgggagactgaggagaccctcaagctgcagaacgtcaagggc
atgaagaagctggagaacttcaagaagaaggagcaggagaagaggaaatggataaaagca
gcttccccggaggatgtggaatactacaactgtcaacaggagctaatggatgacctgcac
tcgcagtaccaaatcgtggaaagaataatcgctcattcgaaccagaagtccgcagcgggt
tacccggactacctgtgcaagtggcagggcctgtcctactcggagtgcagctgggaggac
ggcgcgctcctttccagaaagttccagaggtgcatcgacgactacatgtgcaggaaccag
tccaagaccattccgtcccgggactgcaaggtgctgaagcagaggccgcggttcgtgccc
atgaagaagcacccgacctacatcggcggagagggcctggagctgagagactaccagcag
gacagcttgaactggatggcccactcctggtgcaagggaaacagctgcatcctggcggac
gaaatgggcctgggcaagaccatccagaccatctgcttcctcagctacctgttcaacgag
caccagctgtacgggcccttcctgctggtggtgcccctgtccaccctcacctcctggcag
agggagatccagctgtgggccccccatatgaacgtggtggtgtacctgggcgacatcagc
agccgcagcatgatcagaacgcacgaatggatgcacccacagaacaagcgactgaagttc
aacatactgctaaccacgtatgaaatcctgctcaaagacaagtcattcctgggaaatgtg
aactgggccttcatcggagtggacgaggcccatcggctgaagaacgacgactccctcctg
tacaagaccatgatggagttcaagtccaaccaccgcctgctcatcaccggcacgccgctg
cagaactcgctgaaggagctctggtccctcctgcacttcatcatgcccgagaaattccac
tcctgggagctgtttgagcaggaccacggaaaggggcgggactcgggctacaccagcctc
cacaaggagctggagcccttcctcctgcgcagggtgaagaaggacgtggagaagtctctc
cccgccaaggtggagcagattctcagggtggagatgagcgccattcagaagcagtactac
aagtggatcttgacccggaactacaaggccctgagcaaaggcaccaaagggagcacgtcg
ggcttcctcaacatcatgatggagctgaagaagtgctgcaaccactgctacctcatcaag
ccgcccgaagacaacgagttctacaacaaggccgaggccctgcagcacctgatacgcagc
agcgggaagctgatcctgctggacaagctgctgctccggctgaaggaccggggccaccgc
gtgctcatcttctcccagatggtccgcatgctggacatcctggccgagtacctgaagagc
aggcagttcctcttccagagactggatggctctataaaaggagagatgaggaaacaagct
ttggatcatttcaatgcggagaactctgaagatttctgcttcctgctctccacgcgcgcc
gggggtctggggatcaacctggcctccgccgacaccgtcgtaatcttcgactcggactgg
aacccgcagaacgacctgcaggcccaggcccgggcccacaggatcgggcagaagagacag
gtgaacatctacaggctggtgaccaaggggtcggtggaggaggacatcattgagagggcg
aaaaagaagatggtgctggaccacctggtcatccagcgaatggacacgaccgggaagacc
gtcctccacactggctccgccccctccagttccaccccgttcaacaaggaggagctgtct
gccatcctcaagtttggtgccgaagagctgttcaaagagcaagaaggagaggagcaggaa
cctcaggaaatggacatcgatgagatcctgaagcgagcagaaaccagggagaatgacccg
ggcccctctactgtgggggaggagctgctctctcagtttaaggtggccaacttctccatg
atggaggaggaggagatggacatggactcggaccgtaaccaccggggctgggagcacatc
atcccggaggagcagaggaggaggctggaggaggaggagcggcagaaggagctggaggag
atctacctcctgccccgcatgaggaactgtgccaaacaggtgaactttaacgggaacgag
ggcaggcggagcaggaaccggcggtattcggggtcggacagcgactccgtctccgaccgc
aagcgccccaaaaagcgggggcggccacggaccatcccgcgcgagaacatcaaggggttc
agcgacgccgagatccgcagatttatcaagagctataagaagtttggtggcccactggaa
aggctggatgcgatcgctcgcgatgcggagctggtggataagtctgagtacgacctgaag
aggctggcagagacggtgcacaacggctgcatcaaaacgctgagagagaacccctgtggg
cccgagaagacctcaggaggccggcgggggaaagtcaagggccccactttccggatttcg
ggggtccaggtgaacgccaagctggtgatctcgcacgaggaggagctggcgcctcttcac
aagtccattcctgctgaccccgaggagaggaagcggtacaccatcccgtgccactcaaag
gcggctcatttcgacatcgactgggggaaggaggacgactcgaacctgctgataggaatc
tacgagtacggctacggaagctgggagatgatcaagatggaccccgacctcaacctcact
cataagctcctgccggacgaccctgataagaagcctcaggccaagcagctgcagacccga
gcggactacctcattaagttattgagcagggatctggccaagaaggaggcgcagagacag
gcgggaacggccaactcccgcaagaggaaacccaggaacaagaagaacaaggtggtgaag
ccgaaggtggaggaggtggtgaagagcgactcctcgcccacgccgtcggaaaagagctcg
gaagaagaggaggaggaggaggaggaagaggaagaggagaaggaagaagagaaggaggtg
ctgccgctgaagacctccagcaggagggccaaggtggagcgggtggccaaggagccggag
gaggacccggtgcccgaggtggtgcccaagaaggagcccgaggagaaggagatcaaagag
aaggagatcaaaaaggagggcaagaaggagaagaaggaggaggtccgcgagacgaaggat
aagaaggaagcaaagaagaaggaggagaaggaggccaagcccgtggaacctgcctacagg
aaggaggacatcaaagaggagaagataaccgaggtgaaggtggagatccgggagtcgaag
tcgaaaaaggcggcggacactccggtgcacatcacggccagcggggagaccgtccccgcc
tcggaggagtccgaggagctcgaccagaagaccttcagcgtgtgtaaggagcgcatgcgt
ccggtgaaggccgccctgaagcagctggaccggccggagaagggcctgtcggagcgggag
cagctggagcacacgcgccagtgcctcatcaagatcggagaccacatcacagagtgtctg
aaggagtactccaaccccgacctgatcaagcagtggaggaagaatctgtggatatttgtg
tcaaagtttaccgaatttgacgccaggaagttgcacaagctgtacaagcacgcgattaag
aaacgacaggaaaacgctcaggcagcggaccataacactagtactgtaaatacaacccac
agctttaaacacacagacgtagagcggttaaaggacaactcgcagcacgacgacagcagc
agggacagctacagctccgacagacaccactcgtcccgctacgcggaacacgggaaggac
cggcacgcccccgacccgtaccggaagggcagcgactcgcgagactcccgcaagaggccg
tactcctccttcagcaacggcaaggaccaccgggatcgggaccgggaccgggaccgggat
cgggatcactaccggtccgagaggcccgacagcaggtattacagcgacaagcacaggaag
atggacgacctccggtccagccgcgaccaccggctggagggcggcgcgaaggagcgctcg
cacggcgaccgccgctcgcactcctccgaccgccggtccggctccgactacgcgcaccac
aagtcctcgcgcgactaccgctaccactcggactggcagatggaccaccgggcgtcgggc
agcggcccgcgctcgccccgggaccagcgctcgccgtacgagtcccgctcgccgccgggc
caccgcgcgcggtcgccgttcgagtactcgtccgaccacaagagcacccccgagcaggtg
tggtgcggccgcaagacataa
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