Anguilla rostrata (American eel): 135240775
Help
Entry
135240775 CDS
T10705
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04382
Cornified envelope formation
arot04510
Focal adhesion
arot04512
ECM-receptor interaction
arot04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135240775
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135240775
09142 Cell motility
04820 Cytoskeleton in muscle cells
135240775
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135240775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arot04147
]
135240775
00536 Glycosaminoglycan binding proteins [BR:
arot00536
]
135240775
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135240775
Glycosaminoglycan binding proteins [BR:
arot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135240775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
135240775
NCBI-ProteinID:
XP_064166762
LinkDB
All DBs
Position
15:30436776..30491850
Genome browser
AA seq
1639 aa
AA seq
DB search
MLLLNCVLLLLFSFDIRPTGAEGCSGTGCGKCDCSGVKGEKGERGFPGLQGNMGFPGMQG
HEGPPGPVGPKGDFGDSGVPGLKGTRGPPGLPGFPGNPGLPGIPGQDGPPGAGGIPGCNG
TKGDRGNDGLPGFPGPSGPPGIPGLTGAKGDAGGIIDGFIPKKGEKGFSGMPGQQGAQGG
PGIPGQNGPVGPPGPRGNPGPPGPKGEQGDKLSFQGEKGDKGDRGHRGPPGPTSPPSEVG
GPSITIAVPGPQGETGERGGKGEKGYCLPYQTGVKGEPGSPGPRGKPGKDGENGSKGEKG
FSGGPGYPGQPGEKGERGRPGYGDSAPGPAGQPGPQGPKGDKGFPGLQGVRGLPGNVIEG
PPGEKGFPGEIGQKGDRGIDGLSLLGPKGINGAPGPPGPPGPPGDGDCNINHGPPGPPGP
PGLGGEEGQKGDQGETCLHCVAHGPPGLPGPPGPEGKQGFPGPGGSKGEQGLSGPPGRQG
DPGSTGSPGLIGAPGAHGPPGDIYAAPELKGDKGFPGTPGSRGLPGVDGLPGRDGNPGHP
GVKGEPATVGIKGDRGRDGDPGSIGTPGERGPPGIPGFGLPGEPGEKGDQGVPGRPGSPG
FAGPKGEAGKGVGSPGPQGVPGPRGDMGRPGRQGDQGPRGDTGMPGFPGQKGDPGLPGIG
LPGLPGPKGFSGIPGASGIPGAPGAAGQDGFPGKTGSPGQKGEPGRGLPGAKGSMGPQGV
SGFPGEKGSSGLPGIPGREGQTGPPGAQGIKGDSGPPGLHGIEGPPGPPGPGEPGPPGPM
GQAGLPGPFGNVGVKGEKGYPGLPGLDMPGPQGEKGSEGLPGIVGSKGFPGRAGPAGRDG
FPGQPGPKGEMGVIGTPGTPGYQGVPGGPGAPGPRGDTGVTGVKGEFGEPGPKGERGERG
QKGLPGSMSEAEKAIMKGDKGDAGDRGGPGRTGEKGYQGQPGVPGMPGKDGEPGSPGQPG
QKGDIGKPGEPGSVGSPGHKGSIGEMGMPGSLGAKGAKGTIGTPGHPGLPGSGGERGDKG
DAGQPGVGVPGPPGEKGQIGLPGFPGTSGEKGQKGVMGVPGMPGSPGQKGDVGLDGRQGS
PGTPGVKGISGFPGLPGDPGVPGRPGEPGLQGPSGPSGEKGEPGVDGIPGSSGEKGDPGV
PGRGLPGSPGQSGTKGDKGNAGVPGFPGSPGIPGIKGSKGTVGEQGQPGWPGERGLQGPS
TEGPKGEKGVLGAQGEPGAPGAAGHPGIPGSVGSKGERGDEGSPGPPGRQGEKGDRGHPG
FPGQTGLPGVNGYKGDVGQQGVPGFQGSKGDTGVIGLKGELGDRGSSGEKGSVGPPGPPG
PHTLVKGDIGFPGIQGPQGPKGHPGFPGLKGLQGVTGQQGDKGDDGVPGYHGRPGSKGEP
GPLGPSGPRGYPGPPGPDGLPGQVGPPGPSSMDHGFLVTRHSQTVEVPGCPEGTSLIYDG
YSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMP
MSMAPVTGQSIKPFISRCAVCEAPAMVIAVHSQTIMIPPCPTGWDSLWIGYSFVMHTSAG
AEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEESEMFKKPVPTTL
KAGDLRTHISRCQVCMKRT
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcctcaattgcgttctgttgcttctgttcagctttgacataagacctacgggg
gctgagggatgctccggcacaggatgtgggaagtgcgactgctctggggtcaaaggtgaa
aagggtgagagggggtttccaggactgcaaggcaacatgggatttcctggaatgcaaggg
catgaggggcccccagggccagttggccccaagggagacttcggagactcaggagtgccc
gggctgaaaggaacacgtggtcctccaggtttgccggggtttccgggaaacccaggtctc
ccaggaatcccagggcaagatggccccccaggtgcaggaggcatcccaggttgtaatggg
acgaagggggaccggggcaatgatggcttgccaggatttcctggaccaagcggccctcct
ggtatccccggattgacaggagcgaagggggatgccggcggcatcatcgacggcttcatc
ccaaagaaaggagagaagggtttcagcggaatgcccggtcagcagggagcgcagggaggt
cccggaattccaggccaaaatggacccgtaggacctccaggaccccgggggaatcctggc
ccccctggccccaaaggagagcagggtgacaagctgtctttccaaggtgaaaaaggtgat
aagggagaccgaggacaccggggtcctcctggacccacgtctccccccagtgaagtgggc
ggaccttctattacaattgctgtacctggaccgcagggtgaaacaggggaacgtggtgga
aaaggagagaaaggttactgtttaccctaccagactggtgtcaaaggggaacctggctct
cctggcccaaggggtaaaccaggcaaggacggagagaatgggagtaaaggcgagaaaggg
ttttctggaggccccgggtaccctggacagccgggtgaaaagggagagcgaggacgtcca
ggatatggtgatagtgctcctggcccagcaggtcaacccggtcctcaaggtccaaaagga
gacaagggtttccctgggcttcaaggagtccggggtctgcctggcaatgtgattgagggc
cccccaggggagaaaggattcccaggagagatcggtcagaaaggggacaggggtatcgat
gggctgtcactgcttggaccaaaaggcataaacggggccccggggccacctggcccacct
ggccctccaggtgatggagactgcaacataaaccacggccccccggggccacccgggccc
cccggactcggtggagaagagggccagaaaggtgaccaaggagagacctgcttgcattgt
gtggcccatggtccccctggccttccgggcccacctggcccagagggaaaacaaggtttc
cctggacctggcggcagcaaaggagagcagggtctatctgggcctcctggtcgtcagggt
gacccaggcagcactggttccccagggctgataggggccccaggagcccatggaccgcca
ggtgacatctatgcagcaccagaactgaagggggacaagggctttcctggcaccccaggg
tcaaggggtctaccgggagtggacgggctccctggccgggatgggaacccgggccatcct
ggagtcaaaggagagccagcaactgtgggtatcaaaggagacaggggcagggatggagac
ccgggttcgattgggacaccaggagagcgagggccccctgggatcccagggtttggtctt
cctggggagccgggagagaagggtgatcagggggtgccagggcgcccaggatctccaggc
tttgcaggacccaaaggtgaagctgggaaaggtgttggctcacctgggccacaaggtgtc
cctggacctcgaggggacatgggaagacctggccggcaaggtgatcaaggtcctcgaggg
gacactggcatgccaggtttccctggacagaagggtgacccaggcctcccaggaattgga
ttacctggcctcccaggccctaaaggtttttctggaataccgggtgcatctgggatacct
ggagcaccaggagcagctgggcaggatggtttccccggaaaaactggctcaccagggcaa
aagggggaaccagggcggggtcttcctggggccaaggggtccatggggcctcagggggtc
tctgggttcccaggagagaagggcagttctgggttacctggcatcccaggacgtgaggga
cagacagggcctcctggggctcagggaatcaaaggtgattcaggacccccagggctgcat
gggattgaggggccacctggccccccaggaccaggcgagccaggaccacctgggcccatg
ggccaagcaggcttacctggcccctttggaaacgtgggagtgaagggggaaaaggggtac
cccggcctccctggcctggacatgcccggacctcagggggagaagggtagcgaagggctc
ccgggaatagtgggatccaaaggctttcccggaagagcaggccctgctggaagagacggg
tttccaggccagccaggtcccaagggggagatgggggtgataggaacaccggggaccccc
ggataccagggcgttcctgggggtcccggcgccccaggaccgagaggtgacactggggtc
actggggtgaagggagagttcggcgagccgggacccaaaggagagagaggagagcggggt
cagaagggactccctggcagcatgagcgaagcggagaaggcgatcatgaagggagacaag
ggagatgctggggacagaggtggtcctggacgaacgggagaaaaaggataccagggacag
cccggagtaccaggaatgccaggaaaagacggagaaccagggtcaccaggacaaccagga
cagaaaggtgacattggaaaaccaggggagccaggaagtgttggatcacctggacataaa
ggcagcattggggaaatgggcatgccaggctcattaggagcaaaaggtgccaaaggaacg
atcgggacacctggccaccctgggctccccggctctgggggagagaggggggataaaggg
gacgcgggacagccaggtgtcggggttcctggaccccctggagagaagggtcagataggc
ttgcctggttttcctggaacctctggagaaaagggtcagaagggggtgatgggagtcccg
ggaatgccaggatcgccaggccagaagggagacgtgggcttagacggccggcaaggaagc
cctggaaccccgggagtgaaaggcatcagtggctttccaggtctcccaggagacccaggt
gtaccaggacggccaggtgagccaggtttgcagggcccatcaggaccctcgggagagaaa
ggtgagccaggtgtggatgggatacccggatcctcaggagagaagggagacccaggtgtg
cctggcagaggcttacctgggagccctggccaatccggcaccaaaggtgacaaaggcaac
gcaggtgtcccaggttttcccggaagcccaggtatcccgggaataaagggcagcaagggc
acggtcggtgaacagggccagccaggctggccgggggaacggggcctccaggggccctcc
actgaagggccaaagggagagaaaggagtgctgggggctcagggagagccaggtgcgcct
ggagctgcgggtcatcctggaattccgggaagtgtaggatccaaaggggagaggggagac
gagggttcccctggccccccgggacggcagggtgaaaagggggatagaggtcatccagga
tttcctggacaaactgggctgcctggagtcaatgggtataaaggagacgttggacaacag
ggagtacctggattccaagggtcgaaaggtgacactggagtgatcgggctcaagggcgag
ctgggagacagaggttcctccggggagaaaggcagtgttgggccccccgggcctcctgga
ccccacaccttagtcaaaggagacattggcttcccagggattcaaggcccccaggggccc
aagggacatccagggtttcccggactgaaggggcttcaaggtgtaacgggacaacagggt
gacaaaggagacgatggggtgcctgggtaccacggacgtcccggctccaagggagagccc
ggccctcttggaccctcaggcccccgagggtatccgggccccccagggcccgacggcctg
cccggccaggtggggcctccgggtccctcgtcgatggaccacgggttcctggtgacccgc
cacagccaaacggtggaggtgccaggctgccccgagggcaccagcctcatctacgacgga
tactccctcctgtacgtccagggcaacgagcgttcgcacggtcaggacctcggaaccgca
gggagctgcttgaggaagtttagccccatgcccttcctcttctgcaacatcaacaacgtc
tgcaactttgcctcccggaacgactactcctattggctgacctcgccggagcccatgccc
atgagcatggcacccgtcaccgggcagagcatcaagcccttcatcagcaggtgtgctgtg
tgtgaggctccagccatggtgatcgcagtccacagccagaccataatgatcccgccctgc
cctaccggatgggactccctgtggattggatactccttcgtcatgcacaccagcgcgggg
gcggaaggttccggtcaggccctggcgtcccccggctcctgcctggaggagttccgctcc
gcccccttcatcgagtgccacgggcggggcacctgcaactactacgccaactcctacagc
ttctggctggccaccatcgaggagagcgagatgtttaagaaacccgtcccaacgacgctg
aaggcgggagacctgcgcacgcacatcagcaggtgccaggtgtgcatgaagaggacgtaa
DBGET
integrated database retrieval system