Anguilla rostrata (American eel): 135240775
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Entry
135240775 CDS
T10705
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04510
Focal adhesion
arot04512
ECM-receptor interaction
arot04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135240775
Glycosaminoglycan binding proteins [BR:
arot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135240775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135240775
NCBI-ProteinID:
XP_064166762
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Position
15:30436776..30491850
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AA seq
1639 aa
AA seq
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MLLLNCVLLLLFSFDIRPTGAEGCSGTGCGKCDCSGVKGEKGERGFPGLQGNMGFPGMQG
HEGPPGPVGPKGDFGDSGVPGLKGTRGPPGLPGFPGNPGLPGIPGQDGPPGAGGIPGCNG
TKGDRGNDGLPGFPGPSGPPGIPGLTGAKGDAGGIIDGFIPKKGEKGFSGMPGQQGAQGG
PGIPGQNGPVGPPGPRGNPGPPGPKGEQGDKLSFQGEKGDKGDRGHRGPPGPTSPPSEVG
GPSITIAVPGPQGETGERGGKGEKGYCLPYQTGVKGEPGSPGPRGKPGKDGENGSKGEKG
FSGGPGYPGQPGEKGERGRPGYGDSAPGPAGQPGPQGPKGDKGFPGLQGVRGLPGNVIEG
PPGEKGFPGEIGQKGDRGIDGLSLLGPKGINGAPGPPGPPGPPGDGDCNINHGPPGPPGP
PGLGGEEGQKGDQGETCLHCVAHGPPGLPGPPGPEGKQGFPGPGGSKGEQGLSGPPGRQG
DPGSTGSPGLIGAPGAHGPPGDIYAAPELKGDKGFPGTPGSRGLPGVDGLPGRDGNPGHP
GVKGEPATVGIKGDRGRDGDPGSIGTPGERGPPGIPGFGLPGEPGEKGDQGVPGRPGSPG
FAGPKGEAGKGVGSPGPQGVPGPRGDMGRPGRQGDQGPRGDTGMPGFPGQKGDPGLPGIG
LPGLPGPKGFSGIPGASGIPGAPGAAGQDGFPGKTGSPGQKGEPGRGLPGAKGSMGPQGV
SGFPGEKGSSGLPGIPGREGQTGPPGAQGIKGDSGPPGLHGIEGPPGPPGPGEPGPPGPM
GQAGLPGPFGNVGVKGEKGYPGLPGLDMPGPQGEKGSEGLPGIVGSKGFPGRAGPAGRDG
FPGQPGPKGEMGVIGTPGTPGYQGVPGGPGAPGPRGDTGVTGVKGEFGEPGPKGERGERG
QKGLPGSMSEAEKAIMKGDKGDAGDRGGPGRTGEKGYQGQPGVPGMPGKDGEPGSPGQPG
QKGDIGKPGEPGSVGSPGHKGSIGEMGMPGSLGAKGAKGTIGTPGHPGLPGSGGERGDKG
DAGQPGVGVPGPPGEKGQIGLPGFPGTSGEKGQKGVMGVPGMPGSPGQKGDVGLDGRQGS
PGTPGVKGISGFPGLPGDPGVPGRPGEPGLQGPSGPSGEKGEPGVDGIPGSSGEKGDPGV
PGRGLPGSPGQSGTKGDKGNAGVPGFPGSPGIPGIKGSKGTVGEQGQPGWPGERGLQGPS
TEGPKGEKGVLGAQGEPGAPGAAGHPGIPGSVGSKGERGDEGSPGPPGRQGEKGDRGHPG
FPGQTGLPGVNGYKGDVGQQGVPGFQGSKGDTGVIGLKGELGDRGSSGEKGSVGPPGPPG
PHTLVKGDIGFPGIQGPQGPKGHPGFPGLKGLQGVTGQQGDKGDDGVPGYHGRPGSKGEP
GPLGPSGPRGYPGPPGPDGLPGQVGPPGPSSMDHGFLVTRHSQTVEVPGCPEGTSLIYDG
YSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMP
MSMAPVTGQSIKPFISRCAVCEAPAMVIAVHSQTIMIPPCPTGWDSLWIGYSFVMHTSAG
AEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEESEMFKKPVPTTL
KAGDLRTHISRCQVCMKRT
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcctcaattgcgttctgttgcttctgttcagctttgacataagacctacgggg
gctgagggatgctccggcacaggatgtgggaagtgcgactgctctggggtcaaaggtgaa
aagggtgagagggggtttccaggactgcaaggcaacatgggatttcctggaatgcaaggg
catgaggggcccccagggccagttggccccaagggagacttcggagactcaggagtgccc
gggctgaaaggaacacgtggtcctccaggtttgccggggtttccgggaaacccaggtctc
ccaggaatcccagggcaagatggccccccaggtgcaggaggcatcccaggttgtaatggg
acgaagggggaccggggcaatgatggcttgccaggatttcctggaccaagcggccctcct
ggtatccccggattgacaggagcgaagggggatgccggcggcatcatcgacggcttcatc
ccaaagaaaggagagaagggtttcagcggaatgcccggtcagcagggagcgcagggaggt
cccggaattccaggccaaaatggacccgtaggacctccaggaccccgggggaatcctggc
ccccctggccccaaaggagagcagggtgacaagctgtctttccaaggtgaaaaaggtgat
aagggagaccgaggacaccggggtcctcctggacccacgtctccccccagtgaagtgggc
ggaccttctattacaattgctgtacctggaccgcagggtgaaacaggggaacgtggtgga
aaaggagagaaaggttactgtttaccctaccagactggtgtcaaaggggaacctggctct
cctggcccaaggggtaaaccaggcaaggacggagagaatgggagtaaaggcgagaaaggg
ttttctggaggccccgggtaccctggacagccgggtgaaaagggagagcgaggacgtcca
ggatatggtgatagtgctcctggcccagcaggtcaacccggtcctcaaggtccaaaagga
gacaagggtttccctgggcttcaaggagtccggggtctgcctggcaatgtgattgagggc
cccccaggggagaaaggattcccaggagagatcggtcagaaaggggacaggggtatcgat
gggctgtcactgcttggaccaaaaggcataaacggggccccggggccacctggcccacct
ggccctccaggtgatggagactgcaacataaaccacggccccccggggccacccgggccc
cccggactcggtggagaagagggccagaaaggtgaccaaggagagacctgcttgcattgt
gtggcccatggtccccctggccttccgggcccacctggcccagagggaaaacaaggtttc
cctggacctggcggcagcaaaggagagcagggtctatctgggcctcctggtcgtcagggt
gacccaggcagcactggttccccagggctgataggggccccaggagcccatggaccgcca
ggtgacatctatgcagcaccagaactgaagggggacaagggctttcctggcaccccaggg
tcaaggggtctaccgggagtggacgggctccctggccgggatgggaacccgggccatcct
ggagtcaaaggagagccagcaactgtgggtatcaaaggagacaggggcagggatggagac
ccgggttcgattgggacaccaggagagcgagggccccctgggatcccagggtttggtctt
cctggggagccgggagagaagggtgatcagggggtgccagggcgcccaggatctccaggc
tttgcaggacccaaaggtgaagctgggaaaggtgttggctcacctgggccacaaggtgtc
cctggacctcgaggggacatgggaagacctggccggcaaggtgatcaaggtcctcgaggg
gacactggcatgccaggtttccctggacagaagggtgacccaggcctcccaggaattgga
ttacctggcctcccaggccctaaaggtttttctggaataccgggtgcatctgggatacct
ggagcaccaggagcagctgggcaggatggtttccccggaaaaactggctcaccagggcaa
aagggggaaccagggcggggtcttcctggggccaaggggtccatggggcctcagggggtc
tctgggttcccaggagagaagggcagttctgggttacctggcatcccaggacgtgaggga
cagacagggcctcctggggctcagggaatcaaaggtgattcaggacccccagggctgcat
gggattgaggggccacctggccccccaggaccaggcgagccaggaccacctgggcccatg
ggccaagcaggcttacctggcccctttggaaacgtgggagtgaagggggaaaaggggtac
cccggcctccctggcctggacatgcccggacctcagggggagaagggtagcgaagggctc
ccgggaatagtgggatccaaaggctttcccggaagagcaggccctgctggaagagacggg
tttccaggccagccaggtcccaagggggagatgggggtgataggaacaccggggaccccc
ggataccagggcgttcctgggggtcccggcgccccaggaccgagaggtgacactggggtc
actggggtgaagggagagttcggcgagccgggacccaaaggagagagaggagagcggggt
cagaagggactccctggcagcatgagcgaagcggagaaggcgatcatgaagggagacaag
ggagatgctggggacagaggtggtcctggacgaacgggagaaaaaggataccagggacag
cccggagtaccaggaatgccaggaaaagacggagaaccagggtcaccaggacaaccagga
cagaaaggtgacattggaaaaccaggggagccaggaagtgttggatcacctggacataaa
ggcagcattggggaaatgggcatgccaggctcattaggagcaaaaggtgccaaaggaacg
atcgggacacctggccaccctgggctccccggctctgggggagagaggggggataaaggg
gacgcgggacagccaggtgtcggggttcctggaccccctggagagaagggtcagataggc
ttgcctggttttcctggaacctctggagaaaagggtcagaagggggtgatgggagtcccg
ggaatgccaggatcgccaggccagaagggagacgtgggcttagacggccggcaaggaagc
cctggaaccccgggagtgaaaggcatcagtggctttccaggtctcccaggagacccaggt
gtaccaggacggccaggtgagccaggtttgcagggcccatcaggaccctcgggagagaaa
ggtgagccaggtgtggatgggatacccggatcctcaggagagaagggagacccaggtgtg
cctggcagaggcttacctgggagccctggccaatccggcaccaaaggtgacaaaggcaac
gcaggtgtcccaggttttcccggaagcccaggtatcccgggaataaagggcagcaagggc
acggtcggtgaacagggccagccaggctggccgggggaacggggcctccaggggccctcc
actgaagggccaaagggagagaaaggagtgctgggggctcagggagagccaggtgcgcct
ggagctgcgggtcatcctggaattccgggaagtgtaggatccaaaggggagaggggagac
gagggttcccctggccccccgggacggcagggtgaaaagggggatagaggtcatccagga
tttcctggacaaactgggctgcctggagtcaatgggtataaaggagacgttggacaacag
ggagtacctggattccaagggtcgaaaggtgacactggagtgatcgggctcaagggcgag
ctgggagacagaggttcctccggggagaaaggcagtgttgggccccccgggcctcctgga
ccccacaccttagtcaaaggagacattggcttcccagggattcaaggcccccaggggccc
aagggacatccagggtttcccggactgaaggggcttcaaggtgtaacgggacaacagggt
gacaaaggagacgatggggtgcctgggtaccacggacgtcccggctccaagggagagccc
ggccctcttggaccctcaggcccccgagggtatccgggccccccagggcccgacggcctg
cccggccaggtggggcctccgggtccctcgtcgatggaccacgggttcctggtgacccgc
cacagccaaacggtggaggtgccaggctgccccgagggcaccagcctcatctacgacgga
tactccctcctgtacgtccagggcaacgagcgttcgcacggtcaggacctcggaaccgca
gggagctgcttgaggaagtttagccccatgcccttcctcttctgcaacatcaacaacgtc
tgcaactttgcctcccggaacgactactcctattggctgacctcgccggagcccatgccc
atgagcatggcacccgtcaccgggcagagcatcaagcccttcatcagcaggtgtgctgtg
tgtgaggctccagccatggtgatcgcagtccacagccagaccataatgatcccgccctgc
cctaccggatgggactccctgtggattggatactccttcgtcatgcacaccagcgcgggg
gcggaaggttccggtcaggccctggcgtcccccggctcctgcctggaggagttccgctcc
gcccccttcatcgagtgccacgggcggggcacctgcaactactacgccaactcctacagc
ttctggctggccaccatcgaggagagcgagatgtttaagaaacccgtcccaacgacgctg
aaggcgggagacctgcgcacgcacatcagcaggtgccaggtgtgcatgaagaggacgtaa
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