KEGG   Anguilla rostrata (American eel): 135241304
Entry
135241304         CDS       T10705                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot04382  Cornified envelope formation
arot04510  Focal adhesion
arot04512  ECM-receptor interaction
arot04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arot00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135241304
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135241304
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135241304
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135241304
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arot04147]
    135241304
   00536 Glycosaminoglycan binding proteins [BR:arot00536]
    135241304
Exosome [BR:arot04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135241304
Glycosaminoglycan binding proteins [BR:arot00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135241304
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135241304
NCBI-ProteinID: XP_064167631
LinkDB
Position
15:complement(30377544..30436671)
AA seq 1674 aa
MKFEVRKVGVMQFQHRVDLKNMRFLILSLAVCFLLTSEVHAGGKSHSGPCGGRDCSGACK
CFPEKGSRGQPGPLGPQGPRGPPGRPGEVGVHGPKGEKGDSGQGGITGPKGAVGLTGVPG
FAGADGIPGHPGQAGSRGKPGADGCNGTQGESGLPGQPGGLGRPGDPGQHGRKGQKGESL
EVRVFMEKFRGDPGDSGLPGLPGPVGLPGLMGFRGYPGPQGPPGYPGPPGQKGAMTVVIK
GVKGELGEAGEPGPPGNDTYPHTSVTTGLPGRKGEKGLKGETGDLADNKGEDGIMGFPGL
RGTSGLDGEPGGKGDIGEPGPQGRDGPKGEVGEPGEVIYYGGRHGEGPPGPAGQPGRKGE
RGEQGDKGLPGPPGLPAISSGQAVVNISPFGPKGEKGLKGLQGEPGPPAQHPGRPGFDGF
PGTPGPPGPKGSFLLYRGRGQPGPAGRPGLKGDAGLCECSISDSPPGAPGPAGAQGRPGM
TGEWGQQGDQGLPGRKGIPGLPGFPGVKGAPGPKGRKGDTWVITEKGQSGDPGDPGLDGG
MGDRGRPGFSGRPGAAGLRGPQGEGPVGAPGEKGFPGAPGLPGKTGLAGDPGRVMSAEKG
RRGLAGDPGFDGSVGFPGLPGAPGGCVLEGSGEQTDAEGECDPVPGQPGDPGFPGISGID
GFAGVPGFKGELGLTGEGGSKGERGEPGRGGAPGPPGFVGPRGDKGQPGNKGVDGPPGLP
GQQGRDGEEGQKGAHGLVFGAAPGPPGDVGPPGLQGTWGPRGEIGNQGYHGMPGMPGILG
PKGDRGPPGLQGEIGRPGPEGKYGFPGVPGPPGPPGPQGIIGSPGFPGDRGIQGDPGPPG
PSGMKGTPGDPGDLGLKGREGLPGDPGEPGPVGFPGVPGLRGSKGSPGMAGFTGVKGVKG
FSGVPGVKGEPGFPGVAGVKGGMGWPGEKGDRGIDGPQGEKPFVPPKMILEMKGVKGDLG
IPGQPGFTGPYGPTGLPGLPGRTGSDGLPGDPSEDKGALGDPGPVGLPGPKGMPGPTGPP
GISGFPGMAGSTGEKGSPGAYGQSGDPGLKGKKGEAGAVIDLPGSTGLRGEFGPPGFPGG
KGSTGQPGDRGSPGFHGIEGMKAESGDPGSDGRPGFEGKRGSPGDQGQKGFPGTPGQTGA
DGFPGTPGHRGFPGLKGIFGLHGLKGQKGFPGTPGLDNWGAPGEPGGKGERGETGISSTQ
SGLPGSPGLKGSGGDPGDPGQPGAPGFQGPQGLPGEPGRLGAIGDPGSKGPKGYQGSPGV
RGSPGIPSPFGDKGEKGLSGIFGQVGLKGLLGDQGQPGVQGQHGVSGKKGVKGEQGLMGV
PGRAGVQGDRGPVGPKGNSGPPGFPGAPGAQGEAPKPPKHLGERGPPGPQGIRGPDGVYG
ENGPQGPPGDPGLFGPKGQKGMPGIGGTPGVPGYRGEGGQRGHQGLEGLEGNPGRPGTPG
IPGMAGRSVSVGYLLVKHSQSEQTPMCPVGMSKLWDGYSLLYLEGQEKAHNQDLGLAGSC
LPRFNTMPFIYCNPGDLCYYASRNDKSYWLSTTAPIPMMPVVEDEIQPYISRCSVCEAPS
VAIAVHSQDVTIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIE
CNGAKGTCHYFANEHSFWLTSIDQSFQSSPEMETLKAGQLLSRISRCQVCMKNL
NT seq 5025 nt   +upstreamnt  +downstreamnt
atgaaatttgaggttcgaaaagtcggggtgatgcagtttcaacacagggtagacctgaaa
aacatgaggtttctgatactctccctggccgtctgctttctgctgacgtcggaagtgcac
gcgggtggtaagagccacagcggaccgtgcggagggagagactgcagcggggcgtgtaaa
tgcttccctgagaaaggttcacggggccagcccgggccgctcgggccccagggtccccgg
ggccccccggggcgcccgggtgaggtgggggttcacggccccaaaggagagaagggggac
tcggggcagggtggcatcactggacccaaaggcgcggtgggattgactggcgttcctggg
ttcgctggagcagacggaattcctggccaccctggacaagcgggctctcgtggaaaaccg
ggcgccgacggctgcaacggaactcagggagagtcggggttgccagggcaaccaggtggt
ctgggccgtccaggtgacccggggcagcatgggagaaagggacagaagggggaatccctg
gaggtcagagtgttcatggagaaatttcggggggatccaggtgactctggcttgccggga
ttacctgggcctgtcggtctcccaggtttgatgggctttagaggctatcctgggccacag
ggcccccctggatatccaggcccacctggacaaaagggtgccatgactgtcgtaataaag
ggagtcaaaggagagctgggggaggctggtgagcctggccccccggggaacgacacctac
ccccacacatccgtgacaacaggacttcctggcaggaaaggagaaaagggtttaaagggt
gaaactggagatttggccgataacaagggggaggatgggattatggggtttcccgggctg
cggggaacctcaggtctggacggggaaccgggagggaagggcgatatcggtgaaccagga
ccacaaggaagagacggacccaagggtgaggtaggagaaccaggagaagtgatatattat
ggaggcagacatggagagggaccacctggaccggccggccagcccggccgcaagggagag
aggggtgagcagggtgacaagggtcttccaggaccccctggacttccagcaatctcctct
ggtcaggcagtggtcaacatcagcccatttgggccgaagggggagaaggggctgaagggt
ctgcagggcgaaccggggccccccgctcagcaccctggacggcctggttttgatgggttt
ccaggcaccccagggccgcccgggcccaaaggatcgtttttactgtataggggaagaggg
cagccaggccccgctgggcggccgggactcaaaggcgatgcaggactgtgtgagtgcagc
atcagcgactctccccctggggctccgggtccggcaggcgcacagggccgccccggaatg
acgggcgagtgggggcagcagggcgaccagggcctccctggacgcaaggggatacctggg
ttacccggttttccaggggtaaagggcgctcccggtcccaaagggagaaaaggagacacc
tgggtgatcaccgagaaaggacaatctggagacccaggagaccctggactagatggaggc
atgggtgacagaggccggcctgggttttcgggacgtccaggggccgctggactgcgtggc
ccccagggggaagggccggtgggcgctccaggggagaaggggttccccggggcaccgggc
ttgcctgggaagacgggcctggcgggagacccgggccgggtgatgagtgcagagaagggg
cgccgtggtctcgctggcgatcccgggttcgatggttcggttggcttccctggactccct
ggggctccaggaggctgtgttctggaaggttctggagagcagacagatgctgaaggagaa
tgtgatccagtgccaggtcaaccaggtgatccgggattccctggaatttctgggattgat
ggtttcgcaggtgtgccaggttttaaaggggagctaggattaaccggggaggggggatcc
aagggggagcgaggagaaccaggcagaggaggggccccaggaccacccggttttgttggg
ccgcgtggcgataagggtcagcctggcaataaaggggtagacgggcccccaggtctcccc
gggcagcagggtagggatggggaggaggggcagaagggggctcacgggctggtctttggg
gcggcccctggacccccaggagatgtgggccctcctggactccaaggcacctggggcccc
agaggggagattggtaaccagggataccacggaatgccaggcatgcctggtatcctcgga
cccaaaggtgatcggggtcctccaggcctgcagggggagatagggagacctggaccagaa
ggaaagtatggattcccaggggtcccaggtccacctggccccccagggccccaagggatc
attggtagcccaggatttcctggagacagaggaattcagggtgacccaggcccacctggg
ccttctgggatgaaaggcacacctggagatccaggtgatctcggtctaaagggcagagaa
ggccttccaggtgacccaggagagccaggtcccgtgggctttcctggagttcctggactg
cgaggttcaaaaggctcgccaggaatggcgggctttactggggtgaaaggtgtaaagggt
ttctccggagttccgggcgtgaagggggagccgggttttccgggggtcgcgggagtgaaa
ggcggaatgggatggcctggagaaaagggtgaccgcgggatcgacgggcctcagggtgaa
aagccgttcgtcccacccaagatgatcctggagatgaagggggtcaagggcgacctcgga
ataccgggacagccgggattcaccggcccctatgggcccacagggttaccaggcctgccg
ggacgaacgggcagtgatggcctaccgggggaccccagcgaggataagggggctttgggt
gatccagggcctgtggggcttccgggacctaaagggatgccgggacccaccggcccaccg
gggatctcaggctttccggggatggccggttcgacgggagagaagggcagtcctggagcc
tacggccagagcggagaccctggactgaagggaaagaaaggtgaggcgggtgcagtgatc
gacttaccgggctccacgggccttagaggggagtttggaccccctggatttccaggaggt
aaggggtccactgggcagcccggagaccgcggcagtcctggtttccatggcatcgagggc
atgaaagcggagagtggagaccctggctctgacgggcgcccaggctttgaggggaaaagg
ggctctccaggagaccaggggcagaaaggctttcccggaacgccgggacaaacgggagca
gacggatttcctggcacgccagggcacagaggttttcctggtctgaagggaatatttgga
ctgcatggcctgaagggccagaagggattccctggaacaccaggtttggataactggggg
gccccaggtgagcctgggggtaaaggagagaggggagaaaccggaatctccagcacacag
tccggactgccagggtcaccagggctcaagggctctggtggagatccaggtgacccaggc
cagccaggagctcccggatttcaaggaccccagggcctgcccggagagcctggccgcctg
ggtgccattggagaccctggatcaaagggaccgaaaggatatcaagggtcccccggggtg
agggggagtcctggaattccctcaccgtttggagacaagggagagaaaggcctgtccggt
atatttgggcaggtgggcctgaagggactcctgggggatcagggtcaaccaggcgtacaa
ggacagcatggagtgtctgggaagaaaggtgtgaagggggagcaggggctgatgggagtt
cctggaagggcgggtgtccaaggagacaggggacctgtaggtccaaagggaaactccggg
cctccaggtttccctggagccccaggtgctcaaggtgaggcccccaagcctcccaaacat
ttgggggagagaggaccaccaggtccacagggaattcgggggcctgacggtgtttatgga
gaaaatggcccccagggtccgcctggtgacccaggattatttggccccaaggggcagaag
ggcatgccaggaatcggcggaaccccaggggtgcctggttaccgtggcgagggcggacag
aggggccaccagggccttgagggcctcgaaggtaatccaggtcgcccaggtacccccggg
atccctggcatggcggggcgcagcgtgagcgtggggtacctgctggtgaagcacagccaa
tcagagcagacgcccatgtgccctgtgggcatgtccaagctgtgggacgggtacagcctg
ctctacctggagggccaggagaaggcacacaaccaggacctgggcctggctggatcttgc
ctccctcgtttcaacacaatgcccttcatctactgcaaccctggcgacctttgctactac
gccagccgcaacgacaaatcctattggctgtctaccaccgcccccattcccatgatgcct
gtggtggaagacgagatccagccctacatcagccgctgctccgtgtgtgaggcgccctct
gtggccatcgcggtgcacagccaggacgtcactatcccacaatgccctgcgggctggcgg
agtctttggattggctactccttcctcatgcacacagcggcaggtgatgaaggagggggt
cagtcgctggtgtcgcccggctcctgcctggaggacttccgcaccacgcccttcatcgag
tgcaacggcgccaaggggacctgccactacttcgccaacgagcacagcttctggctgacc
tccatcgaccagtccttccagagctccccggaaatggagaccctgaaggctgggcagctc
ctgtcccggatcagccgctgccaggtgtgcatgaagaacctgtga

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