Anguilla rostrata (American eel): 135241314
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Entry
135241314 CDS
T10705
Symbol
lmo7a
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135241314 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arot04121
]
135241314 (lmo7a)
Ubiquitin system [BR:
arot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135241314 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135241314
NCBI-ProteinID:
XP_064167641
LinkDB
All DBs
Position
15:35942226..36009166
Genome browser
AA seq
2027 aa
AA seq
DB search
MEWREQSTVSCEDAFLEAQRWVEEVTKKRFGSSSFRSALENGVLLCDLINRLKPGIVKRV
NRLSTPIAGLDNVNVFLRACGKLGLKEAQLFHPGDLQDLSSRVTVRPEETNRRLKNVLIT
IYWLGRKAQADPIYNGPYLKLKAFEGLLGLALSKALEDPANPRVNVRDSGFSDSWYTEKE
EPFPPQPSHRREDSLDSLDSVESRTLSISSDTTLKGSSEGCGSDAEADLGYRMTESKDGL
QYRRSLVVEPKAAAQFNQFLPTKDKPSGYVPAPLRKRRVERQEDNRRSWASPLFTEEDGT
FASGGEAGTGPSPQNGVCLGDAPPAPPPRSPLGYGSESDSDADRPDPDLVLDDLASRRFR
SPSPLAPPNFAVPLSPLGAGRFLAAPHPLATVPNAPHSAEPPLSGASPCPPTPPGEGRGV
RRTDPFPDSDEDSDEPGYADPVQDDLYLRKVGLNLQPSACELYDRFLPKFWTPEEDLHVH
SIRVGSRRRPWYRKIQGFSRTASDSSSEDSECDIHPWLVPCSRPPGLSDTPPSHPHAPDG
SAHPHAPDGSAHPQPPVAQRKYSAFFKPFSFCPSVLCVSEPLLWAPLGVKALSCSLSLSL
SLFLSFLSSPCSSLTQSLTASPPFTVLPYSKRPPKFDPSAAPRLVRCQGRPRRGDPLARD
TLPDLENDDMFARRTGASGCADLRAASPQSEGGPPPPSYGASGGFTIVTQPRRGAPVLPD
VLRDDLLFRKVSAPGADRPLSGGPDTYTALPLPAPDALPDRLRARLLCQPCPPAPEEGEE
AAGDPEGEGRPRTDDMSLRRLGAGLPKGAGPPPGPAVPASCSEEDLQKWRSIREASRVKH
KKRLMVERRFQKRSGCDGSKSMNDITVDPEVLRQVRYEELAKIRAQVKENEDQWQDDLSK
WKNRRKSVNSSIVKKKEEREQIEQITGGGDGGGGSTRRPKTFKEMQEERESRGPASPSPS
RRLQSASEDVPSGPAPQPHARKLSGRSYTVDSLYSSQNRAASPLSPPVEEDREHAQDPEL
DPTPVLKPTSLYPAKTAALRASPTSAAGAEQPDGVLKTQAAAPKTWSAPAPISWSAPPSI
LVRPLPCPCSSPTLTTTSAKLSSSTAVSRSGASSPAAAAAKPGEPRFPFSRPAAEEQGSG
ALYRRSGVGAALAPAVSASLPRSYQRPDSSRLTSVVTPRPFGTQATRIASLPRTFAQTDG
PQKRVNGGTAGSSRYRAFMTEEEVRAQASSAHSSEEEEEEEEEEEEGEEEEEEEEQQQEG
VTPAPLSSTDGPKPKPESALRSVPKSEDTQEVYCDMRINLNQKPNSGRDFGFQTNWDSTG
AFIKSIQEGSPAELCQLRAGDEVLAVSGLQVSELSYDQWKASLEAALQKGCLVMDIRRHG
RNTWERDPPSLPYKSHKTINLTTMDPTLVGSPDKFINTCGERAPQPAAEIATRAQESSRP
PVTDVASKGMNGGFRDDSVTMRKKDSEPISLKNFKRRSEFFEQQGGAESAISDLQVPPVS
SSSNRWSWDLDEERRRQEKWQKEQERLLQEKYQRDQEKLEEEWRRAQQEAVQSAAGKLEV
DRGATEAETRSLSPYSPLSPLSQATPPPADEEEEERERQEVEQQLQREEEERLRRKEELR
LQRKREEEEAAKRREAELKERKRREDEERLRRAEELRLQRKREEEEEERRRKLEEEERRR
RRQKAEEEQRREQEALQEQWAGVESYGFAKILPEMSRSDRAKSKSTPDLDEVQKEDARGA
SSRQGGMAQWLLEEELQRKRSSRAQKLQAASELEAERRNILNAMKYRNPERVVNSGAGEA
SWSRDSVRRAGQPLKPAENDRQLILEEMKKKTLLLTDSSWIRQRSASMNKEPASPASPIR
RGESLDYLDTDNSWRPPSWSAAPTAYSRPQSAVPVSAPSRGYTRPASSTLPASPTPAAAP
RPSSWALNPPVAPYQDRPPTDPDPSSLQRSRSVSGKKICTFCDTPLGKGAAMIIESLGLC
YHLSCFKCSDCKAGLGGSETGAEVRIRNQQLYCNSCYIRFKTGKPTM
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgaacagtccacggtcagctgcgaggacgccttcttggaagcccagaga
tgggttgaggaggtgaccaagaagcgcttcggcagcagcagcttccgatcggcgctggag
aacggagtcctgctgtgcgatctgatcaacaggctgaagcccgggattgtgaagagggtg
aacaggttgtccactcctattgccggcttggacaacgtgaacgtcttcctccgggcctgc
gggaagctcggactgaaggaggcgcagctcttccaccccggggacctgcaagacctgtcc
tcccgcgtcaccgtcagaccagaagaaactaacaggaggctgaagaatgttttaataacc
atctactggctcggcagaaaggcacaggctgaccccatctataatggaccttacctaaag
ctgaaagcattcgaagggttacttggtctagcgctctctaaggctctcgaggatccggcc
aaccccagggtgaacgtgagggacagcgggttcagtgacagctggtacacagagaaagag
gagccatttcccccgcagcccagccacaggagagaggactctctggacagcttggactcc
gtggagtcaaggacactgagcatctcttcagacacaactctaaaaggcagcagtgaaggc
tgtggcagcgacgctgaggcagacctgggctacaggatgacggagagcaaggacgggttg
cagtaccggcgctcgctggtcgtcgagcccaaagccgccgcgcagtttaaccagttcctg
cccaccaaggacaagccgtccggctacgtgcccgcccccctgcgcaagcggcgcgtcgag
cgccaggaggacaaccgccgcagctgggccagcccgctgttcaccgaggaggacggcacc
ttcgccagcgggggcgaggcgggcactggcccctcccctcagaacggggtgtgcctcggc
gacgccccccccgcgccccccccgcgctcccccctcgggtacgggagcgagagcgactcg
gacgccgaccggcccgacccggacctggtcctggacgacctggccagccggaggttccgg
agcccctcccccctcgccccgcccaacttcgccgtgccgctgagcccgctgggggcgggg
cggttcctggcggccccccacccgctggcgaccgtcccaaacgctccacactccgccgag
ccccccctcagcggtgcgtctccgtgcccccccactccgccgggggaggggcgcggtgtg
cggaggacagacccgttcccggactcggacgaggactctgacgagccggggtacgccgac
ccggtgcaggacgacctgtacctgcgcaaggtgggcttgaacctgcagccctccgcctgc
gagctgtacgacaggttcctgcccaagttctggacccccgaggaggacctgcacgtgcac
agcattcgggtggggtcccgacgcagaccctggtacaggaagatccagggcttcagccga
acggcgtctgactcctcctctgaggactctgagtgcgacatccacccctggctcgtgcct
tgctcacgccccccgggcctgtccgacacgccccctagtcaccctcacgcccccgatggc
tccgcccaccctcacgcccccgatggctccgcccacccgcagccccccgtggctcaaagg
aagtattcggcttttttcaagcctttttccttctgtccttctgtcctctgtgtttctgag
cctctgctctgggctcctctgggggttaaagctctttcctgctctctctctctctctctt
tctctctttctctctttcctgtcgtctccctgcagctctctcacgcagtcactcacagcc
tcgccacctttcacagtcctcccgtactccaaacgccccccaaagttcgacccctccgcc
gccccgcggctggttaggtgccagggacgcccccgccggggggacccgctggcccgggac
acgctccccgacctggagaacgacgacatgttcgcccggcgcacgggcgcctccggctgc
gcagacctgcgcgcggcgagcccgcagagcgagggggggccgccccccccgtcctacggc
gcctcgggggggttcaccatcgtcacccagccccgccgcggcgcgcccgtcctcccggac
gtcctgagagacgacctgctcttccgcaaggtcagcgcccccggagcggaccggcccctg
tccgggggtcccgacacctacaccgccctgcccctccccgcgccggacgccctgcccgac
aggctccgggcccggctgctgtgccagccctgcccccccgcgcccgaggagggggaggag
gcggccggcgacccagaaggggaggggcgtccgcgaacggacgacatgtcgctgaggaga
ctgggggcggggcttcctaaaggggcggggccaccccccggcccggccgtgcccgcctcc
tgcagcgaggaggacctgcagaaatggcggtcgatccgcgaagccagccgcgtgaagcac
aagaagaggctgatggtggagagacggttccagaagcgttctggttgtgacgggagcaag
tccatgaatgacatcaccgtggatccagaggtgctccggcaggtgcgctacgaggagctg
gccaagattcgcgctcaggtcaaagagaacgaggaccagtggcaggatgacctgagcaag
tggaagaaccggaggaagagtgtgaactcgagcatcgtgaagaagaaggaggagcgggag
cagatcgagcagatcaccggcgggggggatgggggcggggggagcacccgccgccccaaa
accttcaaggagatgcaggaggagagagagagccgaggaccggcctctcccagccccagc
cgcagactgcagtccgccagcgaggacgtcccgtccgggcccgccccccagccgcatgcc
cgaaagctctcggggcgcagctacaccgtggacagcctgtactcgtcccagaacagggcc
gcctctcctctatcgccccctgtggaggaggacagggagcacgcccaggacccggagctg
gaccccaccccggtcctgaagcccacgtctctgtaccccgccaaaaccgccgctctccgg
gccagcccgaccagcgccgcgggggcagaacagcccgacggcgttctcaagacccaggcc
gccgcccccaaaacctggtccgcccccgcccccatatcctggtccgcccctcccagtatc
ctggtccgccccctcccctgcccctgctcctcccctaccctcaccaccacctccgccaag
ctctccagctccaccgccgtgagcaggtctggggcgagctcacccgccgccgccgccgcc
aagcccggcgagcccaggttccccttcagccgaccggcggcggaggagcagggctctggc
gccctctacaggcgcagcggcgtgggcgcggctctggctccggcggtctccgcctccctc
ccccggagctaccagaggcccgacagctcgcgcctcacctccgtggtcacgccccgcccc
ttcggcacccaggccacgcgcatcgcctccctgccccggacgttcgcgcagacggacggc
ccgcagaaacgcgtcaacggagggacggcagggtcgagccgctaccgcgcgttcatgacc
gaggaagaggtgcgcgcccaggccagctccgcccacagcagcgaggaagaggaagaggag
gaggaggaggaggaggagggggaagaggaagaggaagaggaagagcagcagcaggaaggc
gtgacaccagcaccactgtccagcactgacggcccaaagcccaaacctgagtctgccctc
agaagtgtccctaagagcgaggacacccaggaagtctactgcgacatgaggatcaacctg
aaccagaagcccaacagcggccgcgacttcggcttccagaccaactgggactccactggg
gccttcatcaagtccatccaggaaggtagccccgcggagctgtgccagcttcgggcgggg
gacgaggtgctggcggtgagcgggctccaggtgtcggagctgagctacgatcagtggaag
gccagcctggaggccgctctgcagaagggctgcctggtgatggacatccgccgacacggc
aggaacacgtgggagagagacccgccttccctaccctataagagccataagaccatcaat
ctgaccactatggatccgacgcttgtaggttcccccgacaagttcatcaacacctgcgga
gagcgcgctccccagcccgccgcggaaatcgccacgagagcgcaggagtccagccgcccg
cccgtcaccgacgtggcctctaaaggtatgaatggcggtttccgtgacgactccgtaacc
atgaggaaaaaagactctgagcccatttctttgaaaaactttaaaaggagatcagagttt
tttgagcagcaaggcggcgctgaatctgccatatcagatttacaggtgccccctgtcagc
tcctcctcaaaccgctggtcctgggacctggacgaggagcggaggcgacaggagaagtgg
cagaaggagcaggagcgcctcctacaggagaagtaccagcgtgaccaggagaagctggag
gaggagtggcgccgggcacagcaggaggccgttcagtctgccgctgggaagctggaggtg
gaccggggcgccacagaggcagaaaccaggagcctcagtccttactcacccctgtcccct
ctgagccaggccacgccccctcccgctgacgaagaggaggaggagagggaaaggcaggag
gtggagcaacagctccagcgtgaggaggaagaacgcttgaggaggaaggaggagctgagg
ctgcagaggaagagggaggaagaggaggcagcaaaacgaagggaggcagaattgaaggag
aggaagaggcgggaggacgaagagcgactgaggagggcggaggagctgaggctgcagagg
aagagggaggaagaggaggaggagagacgccgcaaacttgaggaagaggagaggaggagg
aggcgccagaaggccgaggaggagcagcgcagggagcaggaggcgcttcaagagcagtgg
gcgggggtagagtcttatgggtttgccaaaattctccccgagatgtcccgctcagacagg
gctaaatctaaatctactccagatctggatgaagttcagaaagaagacgccagaggtgcg
agcagcaggcaggggggtatggcccagtggctgctggaggaggagctgcagaggaagagg
agcagcagggcacagaagctgcaggccgcgtccgagctggaggccgagaggagaaacatc
ctcaatgccatgaaatacagaaaccccgagagagtggtgaacagcggtgccggcgaggcg
tcctggagccgggactccgtgaggagggcggggcagccgctcaagcccgcggagaacgac
cggcagctgatcctggaggagatgaagaagaagaccctgctcctgacagacagcagctgg
atccgccagcgcagcgccagcatgaacaaggagcccgccagccccgcctcgcccatcagg
agaggggagtctctggattatctggacaccgataactcctggagaccgccctcctggtcg
gcggcccccactgcctacagccgcccgcagtccgctgtgccagtctccgccccctcccgc
gggtacacgcgccccgcctcctccaccctccccgcctcccccacccccgcggccgcccca
cggcccagctcctgggccctgaacccccccgtcgccccataccaggaccgcccccccacc
gaccccgacccctcgtccctgcagcgcagcaggtcggtcagcgggaagaagatctgcacc
ttctgcgacacccccctggggaaaggggcggccatgatcatcgagtccctggggctctgt
taccacctgagctgttttaagtgcagcgactgtaaggctggcctgggtgggtcagagacg
ggcgccgaggtccgaatacggaaccagcagctctactgcaactcctgctacatccgattc
aaaactggaaagcccaccatgtga
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