Anguilla rostrata (American eel): 135241601
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Entry
135241601 CDS
T10705
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03420
Nucleotide excision repair
arot04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
arot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
135241601 (ddb1)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
135241601 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
135241601 (ddb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135241601
NCBI-ProteinID:
XP_064168190
LinkDB
All DBs
Position
16:5714942..5748057
Genome browser
AA seq
1139 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQVPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVTHQQLIQITSGSVRLVM
QETKALVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLEIHRGELKQISFTEMEHEVAC
LDITPLGEGGESPLCAVGLWTDISARILKLPSFSALHKEMLGGEIIPRSILMTTFEGSHY
LLCALGDGALFYFGLDLQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESP
RRICYQEMSQCFGVLSSRVEMQDASGATAAVRPSASTQALSSSVSSSKLFPSSTSPHETS
FGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDPSVYFVVGTAMVYPEEA
EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT
ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD
DDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESS
TPTQGSVLFGTVNGMIGLVTSLSEGWYSLLMDLQNRLNKVIKSVGKIEHSFWRSFHTERK
TEQATGFIDGDLIESFLDLGRAKMQEVVSSLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataattacgtggtcaccgcacagaagccgacggccgtcaatgcctgcattact
gggcacttcacctccgcggaggacctcaacctcctcatcgccaagaacacccggctggag
atctacgtggtgacggccgaggggcttcggccggtcaaggaggtggggatgtacggcaag
atcgccgtcatggaactcttccggccgaagggcgagagcaaagacctgctgttcatcctg
acggccaagtacaacgcctgcatcctggagtacaagcagagcggggagagcatcgacatc
atcacccgcgcccacggcaacgtgcaggatcggattggccggccctcagagacggggatc
attggcatcgtggacccggagtgccgcatgattggcctacggctgtacgacggtcttttt
aaggtcatccccctggaccgagagaaccgcgagctcaaggccttcaatatccggctagag
gagcttcaggtcatcgacgtccacttcctctatggctgccaggtccccacagtgtgcttc
atttaccaggatccccagggcaggcacgtgaagacgtacgaagtgtcgctccgcgagaaa
gagttcaacaagggcccctggaagcaggagaacgtggaggccgaggcgtccatggtcatc
ccagtgccagagccatttgggggagccataatcatcgggcaagagtccatcacctaccac
aacggagacaaatatttggccatagcgccccccaccatcaagcaaagcactattgtgtgc
cataaccgcgtggaccctaacggctcccgctacctgctgggggacatggagggccggctc
ttcatgctgctcctggagaaggaggagctgatggacggagccgtggtgctcaaggacctg
agggtggagctactgggggagacctccattgctgagtgtctcacatacctggacaatggc
gtggttttcgtgggttcccgacttggagattcccagctggtcaagctgaatgtggacagc
aatgatcagggctcgtacgttgccgtgatggagaccttcaccaacctggggcccattgtg
gacatgtgtgtggtggacctggagagacagggccagggacagctggtcacctgctcgggc
gcttttaaggaggggtcgctgagaatcatccgcaacggcatcgggatccacgagcacgcc
agcatcgacctgccggggatcaaaggactgtggcccctgcgctcggaggccggacgggag
accgacgacatgctggtgctttccttcgttggccagacaagggtgctgatgctcagcggt
gaggaagtggaggagacggagctgcctgggtttgtggacaaccagcagaccttctactgc
ggcaacgtgactcaccagcagctcatccagatcacctccggctcggtgcggctggtgatg
caggagaccaaagcgctggtgagcgagtggaaggagccgcaggggaggaacatcagcgtc
gccgcctgcaactccacacaggtggtcctggctgtgggccgcgtgctgtactacctggag
atccaccgaggagagctcaaacagatcagcttcacggagatggagcacgaggtggcctgc
ctggacatcacgcccctcggggagggcggggagtcgcccctgtgcgccgtgggcctgtgg
acggacatctccgcccgcatcctcaaactgccctccttctccgccctgcacaaggagatg
ctgggaggagaaatcatcccccgctccatcctgatgaccacgttcgagggaagccactac
ctgctctgcgccctgggagatggagcgctcttctactttggcctagaccttcagacaggt
gtcctcagcgagcgcaagaaggtcaccctggggacgcagccgacggtcctgcgcacgttc
cgctccctgtccacctccaacgtcttcgcctgctccgaccggcccaccgtcatatactcc
agcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgcccc
ctcaactccgagggctaccccgacagtctggccctggccaataacagcacactgaccatt
ggaaccatcgatgagatccagaaattgcacattcgcactgtccctctgtacgaatctccc
aggagaatctgttatcaggagatgtctcagtgtttcggggtgctgtccagccgggtggag
atgcaggacgccagcggagccaccgctgccgtccgtcccagtgcgagcacgcaggctctc
tccagcagcgtcagctccagtaagctcttccccagcagcacctccccccacgagacctcc
tttggggaggaggtggaggtccacagcctgctcgtggtggaccagcacaccttcgaagtg
ctccacgctcaccagttcctgcagagcgagtacgctctcagcatggtgtcctgtcgtctg
ggccgggacccctctgtgtacttcgttgttggcacggcgatggtgtaccccgaggaggcg
gagccgaagcagggccgcatcatcgtcttccactacactgatgggaagctgcagacagtg
gctgagaaggaggttaagggagcggtgtactccatggtggagttcaatggcaagctgctg
gctagtatcaacagtactgtgcgcctgtatgagtggacagctgagaaggagctgaggacg
gagtgcaaccactacaacaacatcatggcgctctacctgaagacgaagggagacttcatc
ctggtgggggacctgatgaggtctgtgctgctgctggcctacaagcccatggagggaaac
ttcgaggagattgcgcgcgacttcaaccccaactggatgagcgccgtggagatactggac
gacgacaacttcctcggcgcggagaacgccttcaacctgttcgtgtgccagaaagacagc
gcggcgaccacggacgaggagcggcagcacctgcaggaggtgggcgtgttccacctgggg
gagttcgtcaacgtgttctcccacgggtccctcgtcctccagaacctgggggagagctcc
acccccacccagggctccgtgctgttcgggaccgtcaacggcatgatcggtctggtgact
tcgctgtcagagggctggtacagcctgctgatggacctgcagaacagactcaataaagtt
atcaagagcgtgggcaagatcgagcacagcttctggaggtccttccacacggagcggaag
accgagcaggcgacgggcttcatcgacggggacctgatcgagagcttcctggacctgggc
cgggccaagatgcaggaggtggtgagcagtctgcagatcgacgacggcagcgggatgaag
agggaggccaccgtggacgaggtgatcaagatcgtggaggagctgacccggatccactag
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integrated database retrieval system
