Anguilla rostrata (American eel): 135242105
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Entry
135242105 CDS
T10705
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135242105 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arot04515
]
135242105 (lrrc4ca)
Cell adhesion molecules [BR:
arot04515
]
Immunoglobulin superfamily
NGL family
135242105 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF6821
Sp38
DUF7617
Ig_6
TMEM154
Syndecan
Motif
Other DBs
NCBI-GeneID:
135242105
NCBI-ProteinID:
XP_064169092
LinkDB
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Position
16:complement(36364495..36466502)
Genome browser
AA seq
639 aa
AA seq
DB search
MLNKMTSSPLQRMRGPKWNRAPSDPFFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAF
NGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSVIRPGSFK
GLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHH
NPWNCNCDILWLSWWLKEMVPANTSCCARCSSPPSHKGRYIGELDQNYFHCYAPVIVEPP
ADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQDT
GTYTCMVSNSAGNTTASATLNVSSTENSFSYFTTVTVETIEPGHDDGRTTVQQSVGPTPS
SGWDSPSSATSTTARTSHSTKTTEKTYTIPVTEIDGALNGLDEVMKTTKIIIGCFVAITL
MAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEELTGGPAMDSHLTLPPLEHEHLNHY
NSYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacatcgtccccactgcagaggatgagagggcctaagtggaacagg
gccccctccgaccctttctttgtgctgctgttggccctccagctgctggtggtggccggc
ctggtgcgtgcccagacctgcccctccgtctgctcctgcagcaaccagttcagcaaggtg
atctgcacccgccggggtctgcgggaggtgcccgacggcatctccaccaacacccgctac
ctgaacctgcaggagaacctgatccaggtcatcaaggtggacagcttcaagcacctgcgg
cacctggagatcctgcagctcagcaagaaccacatccgcaacatcgagatcggcgccttc
aatgggctggccagcctcaacaccctggagctcttcgacaaccggctcaccaccatcccc
aacggggccttcgagtacctgtccaagctgaaggagctgtggctgcggaacaaccccatc
gagagcatcccctcctacgccttcaaccgcgtgccgtcgctgcggaggctggacctgggc
gagctcaagcgactctcctacatttccgagggggccttcgagggcctgagcaacctgcgc
tacctgaacctgggcatgtgcaacctgaaggagatccccaacctcatccccctggtccgg
ctcgacgagctggagatgtcgggcaaccagctgtccgtcatccgcccgggctccttcaaa
gggctcatccacctgcagaagctgtggatgatgcacgcccagatccagaccatcgagagg
aactccttcgatgacctgcagtcgctggtggagctcaacctggcccacaacaacctcacc
ctgctgccccacgacctcttcacccccctgcaccacctggagcgggtgcacctgcaccac
aacccctggaactgcaactgcgacatcctctggctcagctggtggctgaaggagatggtg
ccggccaacaccagctgctgcgcccgctgcagttccccaccgagccacaaggggcgctac
atcggggagctggaccagaactatttccactgctacgcgccagtgatcgtggagccgccc
gcggacctgaacgtgacagagggcatggcggcggagctgaagtgccgggccagctcgctg
acctccgtcagctggatcacgcccaacggctccatcatgacgcacggcgcctacaaggtg
cgcatctcggtgctcaacgacgggacgctgaacttcaccaacgtcaccatgcaggacacg
ggcacctacacctgcatggtgagcaactcggcgggcaacaccacggcctccgccacactc
aacgtgtcctccaccgagaacagcttcagctacttcaccaccgtcaccgtggagaccatc
gagcccggccacgacgacgggcggacgacggtgcagcagagcgtgggccccaccccgtcc
tctggctgggactcgccctcctcggccaccagcaccaccgcccggacctcgcactccacc
aagaccacggagaagacctacaccatccccgtgacggagatcgacggcgccctcaacggg
ctggacgaggtgatgaagaccaccaagatcatcatcggctgcttcgtggccatcaccctg
atggccgccgtcatgctcatcatcttctacaagatgcgcaagcagcaccaccagcagaac
caccacgccccgacccggaccatcgagatcatcaacgtggacgaggagctgaccgggggg
cccgccatggatagtcacctgaccctgcctcccctggagcatgagcacctcaaccactac
aactcctacaagactgcgtacaaccacgcctccaccatcaactccatacacagctccgcg
catgaacctttgctaatccgggccagctccaaggacaatgtacaagagacccaaatataa
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