Anguilla rostrata (American eel): 135242506
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Entry
135242506 CDS
T10705
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135242506 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arot03009
]
135242506 (utp4)
Ribosome biogenesis [BR:
arot03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135242506 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR5
WD40
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_VPS8
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
PROPPIN
RMC1_N
WD40_Gbeta
Beta-prop_ACSF4
Ge1_WD40
Lactonase
Motif
Other DBs
NCBI-GeneID:
135242506
NCBI-ProteinID:
XP_064169648
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Position
16:complement(9691646..9699497)
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AA seq
687 aa
AA seq
DB search
MGEFKVHRVRFFDYMPAGIRCMSFNYKTQRLALARQDGTVEILNFSDNYFQEKVIPGNDS
RSIEAVCWVGERLFTAGLNGEITEYDLFNLRSKYSLDAFGGPIWTLACNAQGTHLAVGCE
DGSVKVFEVFEEKIRFEKNLDRQKGRIVSLSWHSSGTQIAAGMLDMIRIFDVQSGRAVQR
MLVDRGATGRRGQECVVWSVAFLSDRTVVSGDSAGKVQVWDGGMGTLVRTHLVSKWDVLC
LSVSQDETSLVAGTSEGTVVQFQFLSATLGEGEGEQEWVRTRTFKHHTHDVRTVLELERA
IVSGGLDTQLVVRPLLDKVEVKSYDTGLRKIHFPHRSLVSCAKQAGLLLFQFPAHLELWR
LGESDAHGCPGDSLPVRRKPEKLLELKRKGEEHISCSALSRCGGWLAYSSVSSVRLFRLN
CKGNQLSIVKISKLPKVLSSAHQLCFSADSSKLFAASSLSSVHVISLSQSECKYVHTFKP
ASGCTEPVHLLAASADGAWLATANRACEVHVYSLRKLKSHCTVPVYGSCPSAMAIHPTTN
NLLVVHADHQIFEYSIAEKRYTDWSRKLQREGLHPLWFERDTPITHVNFNPQKPAQFLLH
DMYMFCVVDQSQPLPDRTTQFYNQLTLRSLSEEERPSRSHAFKVCKRFQPLLSMHTLEDG
ALVVVERPLLDITTQLPAPVRQKKFAT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtttaaggttcaccgcgttcggttcttcgactacatgcctgctgggatcaga
tgcatgtcattcaactacaaaacacagaggctggcattggcgagacaggacggaaccgtt
gagattttaaacttctctgacaactacttccaggaaaaggtgattccaggaaatgactcc
cggtccatcgaagctgtgtgttgggtcggggagcggctgttcaccgcaggcttgaacggg
gaaataacggagtatgatttgttcaatctccgctccaaatactcattggacgcttttgga
ggtcccatctggactttggcgtgcaatgcccagggcactcacttagcggtcgggtgtgaa
gacgggtcggtgaaagtgttcgaagttttcgaggagaagatccgtttcgaaaagaatctg
gacagacagaaaggccgcattgtctctctgtcctggcactcgtccggaacccagattgcc
gctggaatgctggacatgatccgcatctttgacgtccaatcagggcgcgcggtgcagagg
atgctggtggaccgcggggccacggggaggcggggccaggagtgcgtggtctggagcgtg
gccttcctgtcggaccgcacggtcgtcagcggcgactcggccgggaaggtccaggtctgg
gatgggggcatgggcacgctcgtcaggacgcacctggtgtccaagtgggacgtcctctgc
ctgtccgtctcgcaggacgagaccagcctggtggccggtacgtccgaaggcaccgtggtc
cagttccagtttctctcggccactctgggggaaggggagggggagcaggagtgggtgagg
accaggaccttcaagcaccacacccacgacgtgcgcaccgtcctggagctggaacgcgcc
atcgtgtccggaggtttggacacacagctagtggtcaggcccctcctggataaggtggaa
gtcaagtcctacgacacgggattgcgcaagatccactttccccatcgcagcctggtgtcg
tgtgcgaagcaggcggggctgctgctcttccagttccccgcccacctggagctgtggagg
ctgggagagagcgacgcccacggttgccctggagacagcctgcctgtgaggaggaaacct
gagaaactgctggagctgaagagaaagggcgaggagcacatcagctgcagcgccctgtcc
cgctgcggggggtggctggcgtactccagcgtgtccagcgtgcggctcttccgtctgaac
tgcaagggcaaccagctcagcatcgtcaagatctccaagctaccgaaggtcctgagctcc
gcccaccagctgtgtttctcagcagattcttccaaactgtttgccgcctcctccctatcc
tcagtccacgtgatttccctcagccaatcggagtgcaagtacgtgcacaccttcaagcca
gcgtcaggttgcacggagcccgttcacctgctggctgccagtgcggacggcgcctggctg
gctacggctaacagggcgtgcgaggtccatgtctacagcctgcgcaaactcaagtcccac
tgcacagtgcccgtgtacggctcctgccccagcgccatggccatccaccccaccaccaac
aacctgctcgtggtgcatgccgaccatcagatattcgagtacagcatagcagagaagcgg
tacacggactggagccggaagttgcagagggaggggcttcaccctctgtggttcgagagg
gacacgcccatcacgcacgtgaactttaacccccagaagcccgcccagttcctcttgcac
gacatgtacatgttctgcgtcgtcgaccaaagccagcctctccctgacaggaccacccag
ttttacaatcagctgaccctgaggagcctatcagaggaggagagaccgagccgcagccat
gcgttcaaggtctgcaagaggttccagcctctcctgagcatgcacacgctggaggacggc
gcgctggttgtggtagagcgccctctgctggacatcaccacccagctccctgcgcccgtc
agacagaagaagtttgccacataa
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