KEGG   Anguilla rostrata (American eel): 135242521
Entry
135242521         CDS       T10705                                 
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
arot  Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:arot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:arot03009]
    135242521 (ighmbp2)
   03012 Translation factors [BR:arot03012]
    135242521 (ighmbp2)
Enzymes [BR:arot01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     135242521 (ighmbp2)
    5.6.2.5  RNA 5'-3' helicase
     135242521 (ighmbp2)
Ribosome biogenesis [BR:arot03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   135242521 (ighmbp2)
Translation factors [BR:arot03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    135242521 (ighmbp2)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 Viral_helicase1 DEAD Helicase_RecD AAA_16 nSTAND3 SLFN-g3_helicase AAA_22 Flavi_DEAD ResIII AAA_25 IstB_IS21 UvrD-helicase AAA SRP54 PhoH T2SSE UvrD_C_2 AAA_18 Zot NPHP3_N Tudor_1_RapA DAP3 NTPase_1
Other DBs
NCBI-GeneID: 135242521
NCBI-ProteinID: XP_064169693
LinkDB
Position
16:complement(5662763..5677236)
AA seq 1013 aa
MEVESFVSRTLELLREEREAEIEETRSWQENVSLKDLQRKGVCLLKLQLESQRTSLYGRL
LGLFVPRKHLAIKILPSNSFGPGDIVGLYDVEGCASSSQLGSGVVTQVSQTAISVAFEAQ
DGFSLEGDVLYNLMKLANNVTYERQKCALNCLNGYSTGPASSLISVLFGYSEPGTLSQSN
PVDFFNTGLDEFQREAVTFALAQTELAIIHGPPGTGKTTTVVEVVLQAVKQGLKVLCCAP
SNVAVDNLVEALARNKARLLRLGHPARLQESIQKHSLDALLARSDSTDIIADIRRDIDRA
FEKMKKSRDKGGRSHLKAEVKELRKELRKREESAIAQILKGVDIVLATNTGAHGGGPLKF
LPKDHFDLVVIDECAQALESSCWIALLKARMCVLAGDHKQLPPTIKSHTAAAKGLALSLM
ERLIQKHGGSVVRMLTAQYRMNAAIMQWASQEMYGGKLIAHASVEKHLLRDLPGVGSTEE
TETPLLLIDTAGCGLSEMETSDEQSKGNQGEADIVALHIEALTEAGVKARDIAVIAPYNL
QVDLLRQLLSQKHPELEIRSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRLNVAVTR
ARRHLAVVCDTQTIRQHAFLKTLLDHMTERGEVRTAFQYLEDAVPMNYAHEPSQQHSQPG
PKPNAKPKPKEKERRETGPRKTPQGRPGPARSAVTEGGAPKTPADGAEGEGKGKEEELRE
ELVSFRKDPERAVLSFPSTLNSHARMLVHRISEELGLTHESVGEGKSRRITVSKPDGPDQ
SASPAGPTERPDQRASYTDSKEHPDQPVSSRASEENPDQSAPSTELPDQSASSTGPKVSE
SGASGLPQVDLKNLHLERMQREQAKRDLKFQCSPAPAQSSKNSKRSAKGKGHSKPSSIES
ALVDDDFDALIDSVVKADSVCASPKCKASVLTLGQLCPFCNRKYCLSHHIPEVHGCGDQA
KAHARIGRSRDAALHAGGGKKALDPNKKAHLQRRLDTKLKGLATQRKVKPKAE
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggaagtggagagctttgtttctcggacactcgagcttcttcgagaggagagagaagca
gagatagaagaaacaaggtcttggcaagagaatgtgtctctcaaagatcttcaacgcaaa
ggagtttgtctcctgaagcttcaattggagagtcagcggacaagtctctacggccgtttg
cttgggctatttgtgccaagaaaacacttggctattaaaattctgcctagcaacagcttt
ggaccaggagatattgtgggcttatacgatgtggagggatgtgcttcctcatcccagctt
ggctcaggtgtggtgacacaagtatcacaaacggccatttcagtggccttcgaggcccaa
gatggtttcagcctggagggggatgtgctctacaacctcatgaaactggcaaacaacgtc
acctatgagcgacagaaatgtgccttaaactgcctgaatggctacagcactggtccagcc
tccagtctgataagtgttctgtttggctactcagaaccagggactctgtcacaatcaaat
cctgtagattttttcaacactggtctggatgagttccagagagaggctgttaccttcgcc
ttggctcagacggaactggcaatcatacacggccctccagggacgggaaaaaccaccact
gtggtggaggtggttctgcaggcagtgaagcaagggttaaaggtgctctgctgtgcccct
tccaacgtggccgtggataacttggtggaggctctggcgcgaaacaaggccaggctgctg
cgcctgggacaccccgcccgcctgcaggagtccatacagaagcactcgctggacgccctc
ctggcccggagcgacagcaccgacatcatcgccgacatccgccgggacatcgaccgggcc
ttcgaaaagatgaaaaagtcgcgtgacaagggtgggcggagtcacctcaaggccgaggtg
aaggagctaaggaaggagctacggaagagggaggagagcgccatcgcccagattctcaaa
ggggtcgacattgtcctggcaaccaacaccggggctcacggtggcgggcccctcaagttc
ctgcccaaagatcactttgacctggtggtgatagacgagtgtgcccaggcactggagagc
agctgctggatcgctctgctcaaggcccgcatgtgtgtcctggccggagaccacaagcag
ctcccgccgaccataaagtctcacacagccgcggcgaaaggcctggccctgagcctgatg
gagcggctgatccagaagcacggcggctcggtggtcaggatgctaaccgcgcagtaccgc
atgaacgccgccatcatgcagtgggcctcccaggagatgtacggcgggaaactcatcgcc
cacgcctccgtggagaagcacctgctgagggacctgccaggagtgggcagcactgaggag
acggaaacgcctctactgctgattgacacggccggctgcgggctgtctgagatggagacc
agcgatgagcagtccaagggaaaccaaggtgaagcagacatagtggctctgcacatagaa
gctctgactgaggctggcgtcaaagccagagacattgccgttattgcaccttacaacctg
caggtggacctcctgaggcagctgctttcccaaaagcaccctgagctagagatcagatct
gtggacgggttccaagggagagagaaagaggcagtggtgctctcattggtcagatctaac
aggaagggggaggtggggttcctggcggaggaccggaggctgaacgtggcggtgacgcgt
gctcggcgccacctagctgtggtgtgcgacactcagaccatccggcagcacgcgttcctc
aagaccctgctggaccacatgacggagcggggcgaagtgcgcaccgccttccagtacctg
gaggacgccgttcccatgaactacgcccacgagccctcacagcaacacagccagcccggg
cccaagcccaatgccaaacccaaacccaaggagaaggaaaggcgggagacgggacccagg
aaaacccctcagggcagacccggtcctgcccggagcgccgttaccgaagggggtgccccc
aaaacccccgcagacggggcggagggagaggggaagggcaaggaggaggagctgagggaa
gagctggtcagcttccggaaggatccggaacgcgccgtgctgagcttcccgtccacgctg
aactcgcacgcccgcatgctcgtgcaccggatctccgaggagctggggctgacgcacgag
agcgtgggggaggggaagagcaggcgcatcaccgtctccaagccagatgggcccgaccaa
tcggcttcccccgcaggtcccacagagcgccctgaccaacgagcttcatacacagactcc
aaagagcaccctgaccaaccagtttcctccagagcatccgaagagaaccctgaccaatcg
gctccctccacggagctccctgaccaatcggcttcctccacagggcccaaagtgtctgag
agtggggcatctggcctgcctcaggtggatctgaagaatttgcacctggagcgcatgcag
agggagcaggccaaaagggacctgaagttccagtgcagcccagcaccggctcagtcctcc
aaaaactccaaacgttcagccaaaggaaagggccactccaagccaagctccatagagtca
gcactggtggatgatgactttgacgcgctcatcgactctgttgtgaaagcggacagcgtt
tgtgcttcgccgaagtgtaaagccagcgttctgaccctgggacagctctgccccttctgc
aataggaaatactgcctcagccaccatatccctgaggtgcacggctgtggggaccaggcc
aaagcccacgctcgcatcggacgaagccgggacgcagcacttcacgcaggcggtgggaag
aaggctctggacccaaacaagaaggcccatctgcagaggagactggacaccaaactcaaa
ggcctggcaacccagaggaaagttaaaccaaaggcggagtag

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