Anguilla rostrata (American eel): 135243295
Help
Entry
135243295 CDS
T10705
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arot01001
]
135243295 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
arot04054
]
135243295 (ciita)
Enzymes [BR:
arot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
135243295 (ciita)
Protein kinases [BR:
arot01001
]
Serine/threonine kinases: Other
TAF1 family
135243295 (ciita)
Pattern recognition receptors [BR:
arot04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135243295 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
AAA_22
AAA_25
LRR_8
ABC_tran
TsaE
LRR_14
DO-GTPase2
AAA_16
Pox_A32
AAA_24
Motif
Other DBs
NCBI-GeneID:
135243295
NCBI-ProteinID:
XP_064171094
LinkDB
All DBs
Position
17:10141746..10166172
Genome browser
AA seq
1212 aa
AA seq
DB search
MVPFQDILYQVRRCVEEASPEEVQNLLKELMEVQVLSRDYYLSLAQEGDSEDLARRISLP
IWQNWDMCHGPIQLLLHRLPPCSPCANGSEMQEMALDLQEHLGETLHDEDLIGYFPRDLL
DIPGGCFSPFPHDDSLDIDISNILQTLFEGQEGYSSDAATVPTSPAKSEPVQQETNNENS
SNGKRGLPAYLASGDPKKAKRRRRAENRSSKGRDKTRRPQKNGDCENNVSPEKGVVTAAP
PGIVRFGPCTVPQFLQVPVFVPAPGGPSFQVIQTFAPVPQQMVKIPVASTMGLGGPTYVL
VPSPTVTPSPQVMPQSPVAGAVVPPDLAVSTPLSSSSDRANKAWSVASVSSLSPATEEPS
CKGLKSPTTHVPPEPDTPKCVAEYMERAKSLMRDTCENATADPGVPFKSLYVDVGPVKRQ
VQANVGRNAKRCLEKELVVLGDGDRRRATLERGRVFEEEAGQRRTGASIALLGKSGAGKT
TFIRRLCLDWAEGDLPRFDFLFLLEGRALNVPQSGFSLRNLLFDISANSKLSRDSDTGVD
VDVVFRHVLARPQRVLIMFDGFDDFRDCDGLLQSPATSASRDDYSAKQLFSGLFQKKVLA
GCTLLVAARPKEVLNQCLGKVDRILELPGFSPTEVELYASRYLAGSPCRDQALKRLREGG
YALRLCANPLLCQSVCYLLDRQGGKKALPSTLTGLCEAVTHHQLFAIGREQEGVESRRAT
VLKLCHAAWEGMKSHSSQLPLDSELSPAEQCELEAAGGILTRYAQWHGKEEPAGHGYGFG
HMLTQSFLAALYLALSRDVSSRALVAQMGVQPRKRKLPADWLDITHRLAMALLFQKRALF
RDCFAEAKGGARGRDVAAKRAAVTAHLKRLSVCEPSPSRLLELCHCIFETGDVKLAKCLS
KSLPCQLSFSGAQLDPPDVFVLHQLLVLSANRSFSLNLEETGINVSGLRELLGLKCVSSF
RASIGDVISLWEDLQKTNAEGLLRNTISKFTINPFKATRLSHIDDLTLLIQIYREKKLPF
CDSNQSEPTLDNDSFSIPAVRNLRRLDFELGAQNGPAGFSKLVKILPDLQWLQHLDLEDN
KIGDAGAEMLAEVLPALLSLEMLNLSQNCIGDGGVAKLAQALSSLPALLCLSLYSNLIGD
GGAENLAAVLPQMKSLTDLDVKYNKFSDSGAMMLSESMRSCPWMKTIGMWNHFIPHGVLE
RLKQQDSRIRTL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggttcccttccaggacatcctataccaggtgaggaggtgcgtggaggaggcatcccca
gaagaggtgcagaacctcctgaaggagctgatggaagtgcaggtcctgtccagggattac
tacctgtcgctagcccaggagggtgattctgaggacctggcgcgtaggatatctctgccc
atttggcagaactgggacatgtgccatggtcccatccagctgctgctccacaggctgcca
ccatgcagtccatgtgccaacgggtcagaaatgcaagaaatggctttggaccttcaggaa
catctgggcgagactttacatgacgaggacctgattggttattttcctcgagatcttctg
gatatccctggtggatgcttctccccctttccccacgatgattctttggacatcgacata
tcaaacatattacagactctgtttgaaggtcaagaaggatattccagtgatgcggctact
gtaccaacttcaccagccaagtcggagccagttcaacaggaaacaaacaatgaaaattcc
agtaatggaaagagaggcctgcctgcctacttggcatctggagatccaaagaaagcaaag
cgcagaaggagagcagaaaataggtcatcaaagggcagagacaagacgcgcaggccccaa
aagaacggcgactgcgaaaataatgtttcaccagagaagggggttgtgaccgcagctccc
ccagggatagtccggttcgggccctgcactgtcccacaatttctgcaggtcccagtcttt
gtgccagctcctggtggtccatctttccaggtgattcagacctttgcacctgtccctcag
cagatggtcaagatccctgtggccagcaccatgggccttggaggtcccacctatgtgctg
gtgccatcgccgacagtcacacccagcccccaggtcatgccccaatctcccgtggccggg
gcggtggttcccccggatctcgctgtctccacgcctctgagttcctcttcagaccgtgca
aacaaagcctggtctgtggcctctgtctcctccctgtctcctgcgacagaggaaccatca
tgcaaaggcttaaagtccccaaccacccatgtgccaccagagcccgacacacccaaatgt
gttgcggaatacatggaaagggccaaatcgctcatgagggacacgtgcgaaaatgcgact
gctgaccccggtgtgcctttcaagtccctctacgtggatgtgggcccggtcaagcggcag
gtgcaggccaacgtggggcggaatgccaaaaggtgcctggagaaggagctggtcgtcctt
ggtgatggcgatcggagacgggccacgctggagagggggcgggtcttcgaggaggaagcg
gggcagaggcgcaccggggcctcgattgccctgctggggaagagcggggcggggaagacg
accttcatccgcaggctgtgcctggactgggccgagggtgacctcccgcggttcgacttc
ctgttcctactggagggacgggccctgaacgtcccgcagagtgggttcagcctgaggaac
ctcctttttgacatttcggcaaactccaagcttagccgagactctgacacgggcgtcgac
gtggacgttgtcttcaggcacgtcctggcccgcccccagagggtcctcatcatgttcgat
ggcttcgacgacttcagggactgtgatgggctcctgcaatccccagccacaagcgcctcc
agggacgactacagcgccaagcagctcttctccggactgttccagaagaaggtcctggcc
gggtgcacgctgctggtggcagcccggcccaaggaggtcctgaaccagtgcctggggaag
gtggaccggatcttggagcttccgggcttctcccccacagaggtggaactttatgcttcc
cgctacttggcggggtccccttgccgtgaccaggctctgaaaagactgcgggaaggtggc
tatgctctcaggctgtgtgcgaaccccttactctgccagtccgtctgctacctcctggac
aggcagggcggcaagaaagcgctgccgtccacgctcacggggctgtgcgaggcagtgact
caccaccagttgtttgcgattggccgagagcaagagggggtggagtcacggcgggcaaca
gttttgaagctctgccatgcggcttgggagggaatgaaatcccacagttcccagctgccg
ctggacagtgagctgagccccgcagagcagtgtgagctggaggcagccggcgggattctc
acccgctacgctcagtggcacggcaaggaggagcccgcagggcatggctacgggttcggc
cacatgctcacccagagctttttggccgccctgtacctagccctgtcccgggacgtgagc
agcagggccttggtggcgcagatgggggtccagccgcggaagaggaagcttccggctgac
tggctggacatcacgcataggctcgccatggccctgctcttccagaagagggcgctcttt
cgggattgcttcgcggaagccaagggcggggcccggggcagagacgtggcggctaagcgg
gccgcggtgacggctcacctgaagcggctgagcgtgtgcgagccaagcccctccaggctc
ctggaactgtgccactgcattttcgagacgggcgacgtcaaactcgccaagtgcctgagc
aagagcctgccctgccagctctccttcagcggcgcccagctggacccgcctgacgtcttc
gtcctgcaccagctcctcgtcctcagtgccaataggagcttctccctaaacctggaggag
accggcatcaacgtctccggccttagggagctcctggggctcaagtgcgtctcctccttc
agagcttccataggggatgtgattagcctttgggaagatctgcagaagacgaatgcagag
ggtcttctgagaaacacaatttcaaagttcactatcaaccccttcaaagctacacgcctg
tctcacattgatgacctcactctcctcatccagatctacagagagaaaaaacttcccttc
tgtgactccaaccaatcagagcccacgttggacaacgattccttcagcatcccagctgtg
aggaaccttcgaaggctggacttcgagctgggtgcacaaaatggtcccgcgggattctcg
aagctggttaagatccttccggacctgcagtggctgcagcaccttgacctggaggacaac
aagattggagacgccggggcggagatgttggctgaggtgctacctgcgctgctatctctg
gaaatgctgaacctatcacaaaactgcatcggagatgggggcgtggccaagctggctcag
gcactctcctccctccctgctctgctttgcctcagcttgtacagcaacctgattggcgat
ggtggagctgaaaacctggctgcggtcctgccccagatgaagtcactgacagatttagat
gtgaaatataacaagttcagcgactcgggagccatgatgctgagtgagagtatgaggagc
tgcccgtggatgaagaccataggaatgtggaaccatttcattccccacggtgttcttgag
cgtctgaaacaacaggactcaaggatacgaacactctag
DBGET
integrated database retrieval system
