Anguilla rostrata (American eel): 135243358
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Entry
135243358 CDS
T10705
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03440
Homologous recombination
arot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135243358 (top3a)
03460 Fanconi anemia pathway
135243358 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arot03032
]
135243358 (top3a)
03400 DNA repair and recombination proteins [BR:
arot03400
]
135243358 (top3a)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
135243358 (top3a)
DNA replication proteins [BR:
arot03032
]
Eukaryotic type
DNA Topoisomerases
135243358 (top3a)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
135243358 (top3a)
FA (Fanconi anemia) pathway
135243358 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
135243358
NCBI-ProteinID:
XP_064171185
LinkDB
All DBs
Position
17:26550096..26562234
Genome browser
AA seq
1170 aa
AA seq
DB search
MIYVIERSLILRGLRLTVQNRLCRHNSADMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGR
ARRREGFSVYNKIYEYEYHLFGQDLTVSMTSVSGHLLGLEFTSAFQKWHSCNPVLLFDAE
VEKHCPENFVQIKRTLEREIRQCQALVIWTDCDREGENIGFEVIDVCKAVKPNIQVFRAR
FSEITPNSIRRACESLTEPDVNVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPASLSNQ
LISYGSCQFPTLGFVVERFKAIQAFIPETFFKIKVTHEMGEEEVEFGWKRHRLFSHTACL
VLYQICMEAPIATVDAVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKIAEKLYTQ
GFISYPRTETNMFPNTLNLTPLVEQQTQDANWGPFARGILERGGPTPRNGNKSDQAHPPI
HPTKYTSNLQGNEQRLYEFIVRHFLACCSQDAVGQETTVDISIAQEKFAAHGLMIIARNY
LDVYPYDRWSTKVIPTYEQGTQFQPTAIEMVDGQTSPPQLLSEADLIALMEKHGIGTDAT
HAEHIETIKSRTYVGLTPDQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLICE
GRKNKDEVLRHYVQKYKAIFIESVRKAKKLDEALSTYLGAAQEISAQEEEQMEMPMPVRK
CPQCNRDMVLKTKKDGVGKFLTCMGYPGCKTAVWFPDSVQEVSRDEAVCPTCQPNPVHML
KFKFKRGSLPPTMPLEFVGCIGGCDDTLREVLNLRYLRGGSDTASQAANGTSGAHSRQPR
PRPQPRAEGGGRPPAPAPPPPVWASPPPAWASPPAAAAGGGNSATVCNCGQDAVLLTVRK
EGPNQGRQFYKCNAGSCNFFLWADEPGGGGGGGGGLPGQTPRLPRPPAVFGGQTQQNGGG
GGGGGFGRPLAGGGGGGGGGGGGGPPCATATSRPSPGPWGRTGPTRAGSSTPAAGRRSSA
AASSSGRTSPAGRPRGRGAGAGAGACPVRPLGSPGRPRSLAGKRSRTVAAVASADPWPAA
GAGAGAGAEGGSPCATATSRPSPGPWGRTGPTRAGSSTPAAGRRSSAATSSSGRMRTTLQ
EEEEVLEEEEVVLEEEEEEVLEEEEVLEEEEEVLEEELGVSLRRRRPGPSRTRRPHPREP
EPVGCVTNRDTHGPHAPWANEAPPVGWPDL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatctatgtaattgaaagatcgcttattttgcgtggattaagattgaccgttcagaat
aggctttgcagacataattccgctgatatgatccggagaactcagattaagaaagtcctc
tgcgtggctgagaaaaacgacgctgccaaagggatagcagagatcatgtcaaacgggaga
gcacggaggagagaaggcttttcagtgtacaataaaatctatgaatatgaatatcacctc
tttggacaggatctgactgtttccatgacatccgtctctggtcatctgctaggactagaa
ttcacttctgcttttcagaaatggcacagttgcaatccagttctgttgttcgatgcagaa
gtggaaaagcattgccctgaaaactttgtccagattaagaggacccttgagagagagatt
cgtcagtgtcaggctcttgttatatggactgactgtgaccgagaaggagaaaacattggc
tttgaagtcattgatgtctgtaaagcagtgaaaccgaacattcaggtgttcagggcgcgt
ttctccgaaatcaccccaaactccattcgtagggcctgcgagtccctgaccgagccggac
gtcaacgtcagcgacgccgtcgacgtcaggcaggagctcgaccttcgcatcggagcatcg
tttaccaggttccagacgctgcgtctgcagaagatcttccccgcctcgctgtccaatcag
ctcatcagctatggcagctgtcagtttcccacattgggatttgtggtggagagatttaag
gccatccaggcctttattcccgagacgtttttcaaaatcaaagtcacccacgagatgggg
gaagaagaggtggaattcggctggaagagacaccgcctcttcagtcacacggcctgtctc
gtcctctaccagatttgtatggaggctcccatcgcaacggttgatgctgtgacgagtaaa
cccaaaagcaagtggcggcctttacctcttgacactgtagaacttgagaaattggcctcc
cgcaaactgagaataagtgctaaagagacgatgaagatcgctgaaaagctgtacactcag
gggttcatcagctatccccgtacggagaccaatatgtttccaaataccttgaacctgacc
cctctggtggagcagcagacgcaggacgccaactgggggccgttcgccaggggcattctg
gagcggggcggccccaccccccgaaatgggaacaagtctgaccaggcccatcctcctatt
caccccaccaaatacacaagcaacctgcagggaaacgagcagcggctgtacgagttcatc
gtacgtcacttcctggcctgctgctcccaggatgcagtggggcaagagaccacggtcgac
atcagcattgctcaggagaagtttgccgcccatgggctgatgatcatagccaggaactac
ctggacgtgtacccctatgatagatggtcgaccaaggtcattcccacgtacgaacaaggc
acccagttccagcccaccgccatcgagatggtggacgggcagaccagtcctccgcagctg
ctgagcgaggctgacctcatcgccctgatggagaaacacggcatcggcactgatgccacc
cacgcagagcacatcgagaccatcaagagccgcacgtacgtggggctgacgcccgaccag
aggttcctccctggagagctgggcatgggcctggttgaaggctacaactcgatgggctac
gagatgtccaagccagatctgagggcagagctggaggccgatctcaagctcatctgcgag
ggcaggaagaacaaggacgaggtgctccggcattacgtgcagaagtacaaggccatcttc
atagagtctgtcaggaaggccaagaagctggacgaggcgctctccacttacctgggcgcg
gcgcaggagatctcggctcaggaagaggagcagatggagatgcccatgcccgtgcggaag
tgcccgcagtgcaacagggacatggtgctgaagacgaagaaggacggcgtagggaagttc
ctgacgtgtatgggttacccaggatgcaagactgcggtgtggttccccgactcagtccag
gaggtcagcagagacgaagccgtctgccccacctgccaaccgaatcctgtgcacatgctg
aaattcaagttcaagaggggcagcctgcctcccacaatgccactggagtttgtgggctgc
atcggcggatgcgacgacacgctcagagaggtcctgaacttgaggtacctgagaggagga
agtgacacggccagccaggcggccaatggcacgtcgggggctcactcgaggcagccacgg
ccccgcccacagcccagagcggagggtggtggcaggcctccggcccctgcgccccccccg
cccgtgtgggcgtcgccccctcccgcgtgggcgtcgcccccggcggccgctgctggtggt
ggcaacagcgccaccgtgtgtaactgcgggcaggacgccgtccttctgaccgtgcgcaag
gaggggcccaaccagggccggcagttctacaagtgcaacgcggggagctgcaacttcttc
ctgtgggcggacgagcccggcgggggcgggggcgggggcgggggcttgcccggtcagacc
cctcggctccccaggccgcccgcggtctttggcgggcaaacgcagcagaacggcggcggc
ggcggcggcggcggcttcggcagacccctggccggcggcgggggcgggggcgggggcggg
ggcggaggggggccaccatgtgcaactgcaacgagccggccgtcacccggaccgtgggga
aggacgggcccaacaagggccggcagttccacacctgctgcaggccgcaggagcagtgct
gcggcttcttccagtgggcggacgagcccggcgggacgtccgcgcgggcggggggcgggg
gcgggggcgggggcttgcccggtcagacccctcggctccccaggccgcccgcggtctttg
gcgggcaaacgcagcagaacggtggcggcggtggcttcggcagacccctggccggcggca
ggggcgggggcgggggcgggggcggagggggggtcaccatgtgcaactgcaacgagccgg
ccgtcacccggaccgtggggaaggacgggcccaacaagggccggcagttccacacctgct
gcaggccgcaggagcagcgctgcgacttcttccagtgggcggatgagaaccaccctccag
gaggaggaggaggttttggaggaggaggaggtggttttggaggaagaggaggaggaggtt
ttggaggaagaggaggttttggaggaggaggaggaggttttggaggaggagctgggggtg
tccctgcgaagaagaaggccagggccgtcccgaacaaggcgtccgcacccaagagagcca
gaacctgtgggctgtgtcacgaaccgggacacacacggaccacatgccccctgggccaat
gaggcgccccccgtgggatggccggatctctag
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