Anguilla rostrata (American eel): 135243440
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Entry
135243440 CDS
T10705
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135243440 (smarce1)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135243440 (smarce1)
PBAF complex
135243440 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pcf11_helical
Sarcoglycan_2
CENPH
Motif
Other DBs
NCBI-GeneID:
135243440
NCBI-ProteinID:
XP_064171348
LinkDB
All DBs
Position
17:complement(30197740..30206280)
Genome browser
AA seq
427 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQMPNTPGFVGYNPYSHLAYNNYRLGGNPGSNSRVTNSSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNEYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGFSLKHTAAARFQRNHRLISDILSENVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFLEATECFNNELKRLCALKVEVDMEKIAAEIAAAEEAARRRA
EEREREVAEQAERAAAAPEEEQPPAASEKPAEEPADGRPKKKKRKDGEEEEEPAAMEMDE
PRPESQRASEEAAGGGEDKESVPEGGDSVMEEGTSDSNTSSESTGTPPDDTLPPEPAPEE
GPSTKPE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcttatgcccctccccccaccccagcccccactacacaaatgccc
aacaccccagggtttgtgggatacaacccttacagccatctggcctacaacaactacagg
ctcggaggaaacccaggcagcaacagcagggtaacgaattcatcagggatcacaattcca
aaaccaccgaagcccccagacaagcctttgatgccgtacatgcgctacagcaggaaggtt
tgggaccaagtaaaggcctccaatccagatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagagacctcactgatgaggagaaacaggactacttgaatgaatacgaa
gcagagaagatcgagtataatgagtccatgaaggcctaccacaactcgccggcctacctg
gcctacgtcaacgccaagagccgcgcggaggccgcgctggaggaggagagccggcagcgc
cagtctcgcctcgacaagggcgagccgtacatgagcatccagcccgccgaggaccccgac
gattacgacgatggcttctccctgaagcacacggccgccgcccgtttccagcgcaaccac
cggctgatcagcgacatcctgagcgagaacgtggtgccggacgtgcgctccgtggtcacc
accgcccgcatgcaggtgctcaagcgccaggtgcagtccctcatggtccaccagaggaag
ctggaggcggagctcctgcagattgaggatcgccaccaggacaagaagaggaagttcctg
gaggccacggaatgcttcaacaacgagctgaaacggctctgcgcgctgaaggtggaggtg
gacatggagaagatcgcggcggagatcgcggcggcggaggaggcggcccggcggcgggcc
gaggagcgggagagggaggtggcggagcaggcggagagggccgccgccgcccccgaggag
gagcagccgcccgccgccagcgagaagccggccgaggagcccgccgacggccggcccaag
aagaagaagaggaaggacggggaggaagaggaggagcccgctgccatggagatggatgag
ccgcggccggagagccagcgggcgagcgaggaggcggcgggcggcggcgaggacaaggag
agcgtgccggagggcggcgacagcgtgatggaggaggggaccagcgacagcaacaccagc
tccgagagcacgggaacaccccccgatgacaccctcccgcccgagcccgcccccgaggag
gggcccagcaccaagcccgaatga
DBGET
integrated database retrieval system
