Anguilla rostrata (American eel): 135244671
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Entry
135244671 CDS
T10705
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1 isoform X1
KO
K09335
visual system homeobox protein 1
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arot03000
]
135244671 (vsx1)
Transcription factors [BR:
arot03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
135244671 (vsx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
135244671
NCBI-ProteinID:
XP_064173222
LinkDB
All DBs
Position
18:complement(5547568..5550487)
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AA seq
348 aa
AA seq
DB search
MSTMTGREDSTDEKPKVKILAPTFGIDKARLNGPGFRSKGFAITDLLGLETDLQPHPAGP
GVGANGDGQSAGIGGFSFAGGSLPLGLGFLCSLAAQQPPGTPCFLPSHIPLLQSRTENHF
MQNLEPQRENYSDDDCLSGDRNDAKNSGNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYP
DVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLP
ESIINSAKSGMMGSCAPWLLGEPAGMHKKSMEIVKKPPGTPESTHSDSYPEETKVKDSDI
AWANRANTTDDSEDMAIDLSSTSKQDSKSTLKPAPPPKDTRSDSENES
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccatgacaggaagagaggattccacggacgagaagcccaaagtcaagattttg
gcgccgacttttggaatcgacaaagcgcggctcaatggacctgggtttagatctaaaggt
tttgcaatcaccgacctcctgggtctcgagactgatttgcaaccccatccagcaggaccc
ggagttggtgccaacggcgacggccagagtgcagggattgggggcttctctttcgccggg
ggctccttgccccttggtttggggttcctctgcagtctagcggcacagcaacctcccggg
actccctgttttctcccgagccacatacctcttcttcagtccaggacggagaatcatttt
atgcagaatttggagccgcaaagggagaactattccgatgacgactgtctttctggagat
cgaaatgatgcaaagaattcaggaaattctcaaaagagaaaaaagaggaggcacagaact
gtattcacgtcacatcagctcgaagaactcgaaaaggctttccacgaggcacattatcca
gatgtttacgcaagagaaatgctcgcgatgaagacggaattgcccgaggacaggatacag
gtgtggttccagaaccgtcgggccaagtggcggaagcgcgagaagtgttggggtcgcagc
agcgtgatggctgaatacgggctttacggcgccatggttcgccactccatcccgctcccc
gagtcgatcatcaactccgccaagagcgggatgatggggtcctgcgctccctggcttcta
ggtgagccagcaggcatgcacaaaaagtcgatggaaatagtgaagaagccgccaggcaca
ccggagtccactcactcggactcgtacccggaggaaacaaaggtgaaagacagcgacatc
gcgtgggcgaacagagccaacacaacggacgactccgaggacatggcaatagacctatcc
agcacttccaagcaggacagcaaaagcactttgaaacccgcgccgccccccaaggatacc
aggagtgattctgaaaatgaaagctaa
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integrated database retrieval system
