Anguilla rostrata (American eel): 135247714
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Entry
135247714 CDS
T10705
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arot03009
]
135247714 (ddx21)
03036 Chromosome and associated proteins [BR:
arot03036
]
135247714 (ddx21)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135247714 (ddx21)
Ribosome biogenesis [BR:
arot03009
]
Eukaryotic type
Pre-60S particles
Helicases
135247714 (ddx21)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135247714 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
DUF3246
ERCC3_RAD25_C
Cas3-like_C_2
AAA_30
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
135247714
NCBI-ProteinID:
XP_064177559
LinkDB
All DBs
Position
2:29721567..29750525
Genome browser
AA seq
760 aa
AA seq
DB search
MKMPVKITMASEDIEIENNMDTSLAEKKSLKKRKKEKTKEVKKINKKKEVKEELDECEPP
IPKKKKKNDTTKSTSKNKSKDVNSNLVNGTPIMKTPSHSSDESSHDSDHDNATKKESVQE
AFNGVLTIPNKQEAETNGHSAGATPVPSSDEATSDSEKEAEETLEQKEGAFSNFRISKET
IKNLEGRGVTYLFDIQVKTFNSVYDGKDVVAQARTGTGKTFSFAIPLVEKLLSETDERRR
GRAPKVLVLAPTRELAIQVSRDFKDVTKKLSVCCFYGGSSYVPQLDSIRNGIDILVGTPG
RVKDHLQNNKLNLSLVKHVVLDEVDQMLDMGFAEQVEEILASSYKKDSDSNPQTLLFSAT
CPSWVYDVAKKYMRPQFEHVDLIGKKTKKTATTVEHLAIACHWSQRAAVIGDVIQVYSGT
HGRTIVFCETKKEATELSMNASIKQDAQSLHGDIPQKQREMTLKGFRNGSFEVLVATNVA
ARGLDIPEVDLVIQCSPPKDVESYIHRSGRTGRAGRTGLCICFYQRKEEEQLRYVENKAG
ITFKRVGVPSANEIIKSSSKDAVKCLDSVPTTAIDYFRDAAEKLIEQRGAVEALAAALAH
ISGATAIEQRSLLNSDAGYTTMLMKCSQEMHSISYAWKSLKEQLGEDIDNKIQRMTFLKG
KTGVCFDVPAAKVKEIQEVWQDGRRWQLSVATELPELEESKRTGGDRGSGGFGGRRGGGR
GGGRGGGGRSSWNHSNNRRGGGRGGAGRGQKRSFSQAFDY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgccagtaaagatcacaatggcaagtgaagatatcgaaattgaaaacaacatg
gacaccagtttggcagagaaaaaatcacttaaaaaacgtaaaaaagaaaagaccaaggaa
gtaaagaagatcaataaaaagaaagaagtgaaagaggagcttgatgagtgtgaaccacct
attccgaagaagaaaaagaaaaatgacaccactaaaagtacctcaaaaaataagtccaag
gacgtcaacagcaacttggttaatggaacaccaataatgaaaactccgtctcattccagt
gacgagtcctcccatgactctgatcatgataatgcaactaagaaggagagcgttcaagaa
gccttcaatggagtattgactatacctaacaagcaggaagctgagaccaatggacactct
gctggggccaccccagttccttccagtgacgaggccacctccgatagtgaaaaagaagct
gaagagactttggaacagaaagaaggggcattctccaactttagaatctcaaaagaaact
atcaaaaaccttgaaggacgtggagtgacatacctgttcgatatccaagtcaaaaccttc
aactctgtttacgatggaaaagacgtggtggctcaggcccgaacgggcacagggaagacc
ttctcatttgccattccccttgttgagaagctgctgtcagaaactgatgagaggaggaga
ggcagagctccaaaagtcctggtccttgcaccaaccagagaactggctattcaagtgtcc
agggattttaaagatgtcacaaagaagctatccgtgtgctgtttctatggtggcagctcc
tacgtcccccagctggatagcattcgcaatggcatcgatatccttgtgggcactccaggg
cgtgtgaaagaccaccttcagaacaacaaactgaacctgtccctggtgaagcatgtggtc
cttgatgaagtggaccagatgctggacatgggatttgctgaacaagttgaggagattcta
gcatcttcatacaaaaaagattcagacagcaatcctcagaccctgctcttttccgccacc
tgtccctcctgggtgtatgatgtggccaagaagtacatgcggccacagtttgagcacgtc
gacctcattggcaaaaagacaaaaaagactgccaccactgtggagcacctggctatcgcc
tgtcactggtcccagagggcggcggtcatcggggatgtgatccaggtgtacagtggcacc
catggccgcacaatagtgttctgtgagaccaagaaggaggccaccgagctgtcgatgaac
gcctcaattaaacaggatgcccagtcattgcacggagacattcctcagaaacagagggag
atgacactgaaaggattcaggaacgggtcctttgaagtccttgttgccactaacgttgct
gctcgagggctagacattccagaagttgacttggtcatacagtgttctccaccaaaggat
gtagagtcatatatccacaggtcagggcgaacaggcagggcaggcaggacgggtctctgc
atttgcttctaccagcgcaaggaagaggaacagcttcgatacgtggagaacaaagccggc
ataacatttaagcgggttggtgtcccatctgccaatgagatcatcaaatcctccagcaaa
gatgcagtgaagtgtttggattctgtacccacaactgccattgattacttccgtgacgct
gcagagaagctgatcgagcagcggggggcagtggaggccttggcagctgccttggcccac
atatctggtgctactgccattgaacagcgctctcttctcaactcagatgcaggctacaca
accatgctgatgaagtgctctcaagagatgcacagcatcagttatgcctggaagagccta
aaggagcagcttggagaggacatagacaataagatccagaggatgaccttcctcaagggc
aagaccggagtttgttttgatgtcccagcagctaaggtgaaagagatccaggaagtgtgg
caggacggtcgacgttggcagctgtctgttgccacggagcttcctgagctggaggagagc
aaacgtactggtggtgaccgggggtctggtggattcggtggtcgccgtggaggaggacgt
ggaggaggacggggaggaggtggaagaagctcctggaaccacagcaacaacaggagaggg
ggaggcaggggaggggcaggaagaggtcagaaacgcagttttagccaggcctttgattat
taa
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