KEGG   Anguilla rostrata (American eel): 135247737
Entry
135247737         CDS       T10705                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:arot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    135247737 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arot03021]
    135247737 (taf5l)
   03036 Chromosome and associated proteins [BR:arot03036]
    135247737 (taf5l)
Transcription machinery [BR:arot03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     135247737 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     135247737 (taf5l)
Chromosome and associated proteins [BR:arot03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     135247737 (taf5l)
    STAGA complex
     135247737 (taf5l)
    TFTC complex
     135247737 (taf5l)
    SAGA complex
     135247737 (taf5l)
    SLIK complex
     135247737 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_SCAP NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_EIPR1 PROPPIN PEP5_VPS11_N WD_LRWD1 Nbas_N Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 135247737
NCBI-ProteinID: XP_064177594
LinkDB
Position
2:complement(30422550..30434604)
AA seq 629 aa
MKTSIHRGPPGPSLRTTDLGYSSKLAMKRVRTEQIQYTVAQYLKRRQYVDTESSLKGAKL
SQSAEEMAANLTVQTESGCANVVSAAPCQADPQQYEMQFARLRNFLSEAEVPWSREVSGV
LYPLFVYLHLDMARCGLKSAVDSFYGRFHGLFLQDAEQRDTVEQLRHVLSSPDVSSNAKL
CAFLDHKYVVRLSDPAYSYLLRYLQSADNAALCRVLSAHVQVEVTAVRRTDYQLYGPGAW
GSSSSCGPASSQRGADPGEGLLDPGGAAPGLPPNEAAAEALQDCIKRVKDGPPSLTTVCF
YAFHHTDQLLNAAEISADSKLLAAGFDNSAVKLWSLRARKLKAEPHRVDVSRIRLACDVL
DEEADDEDSAGSEMKILRGHCGPVYRTTFLTDCSGLLSCSEDTTIRYWNLGSFTNTVLYQ
GHAYPVWDVDISPCSLYFASGSHDRTARLWTFARTYPLRLYAGHLADVDCVKFHPNSNYL
ATGSADKTVRLWSTQQGSSVRLFTGHRGPVLALAFSPNGKYLASASEDQRLKLWDLASGS
LFKDLRGHTDTVTGLSFSPDSSLVASSSMDNSVRVWDIRNSHGGSAPTDGSSSELVGLYT
GSTSNILSVQFMACNLLLVTGTAQEKQEH
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgaaaaccagcatacacaggggtcccccaggaccgagtttgagaaccactgacctaggc
tacagctctaaattagcaatgaagagggtgcggactgagcagatccagtatacagtggct
cagtacctgaaaaggcggcagtatgtggacactgaaagttccctgaagggggccaagctt
tcccagtctgccgaggagatggcagctaacctcacagttcagacggagtctggctgtgcc
aacgtggtctctgcagctccgtgtcaggcagacccgcagcagtacgaaatgcagtttgcc
agactgcgcaacttcctgtccgaagcggaggtgccgtggagccgggaggtgagcggcgtg
ctgtacccgctgttcgtctacctgcacctggacatggcgcgctgcggactgaagagcgcg
gtggacagcttctacggccgcttccacgggctcttcctgcaggacgccgagcagcgggac
acggtggagcagctgcgccacgtcctgtcctcgccggacgtctcgtccaacgccaagctc
tgcgccttcctggaccacaagtacgtggtgcgcctgagcgacccggcctacagctacctc
ctgcgctacctccagagcgccgacaacgccgccctctgccgggtgctcagcgcccacgtg
caggtggaagtgacggccgtccggcggactgactaccagctgtacgggccgggcgcctgg
ggctcctcgtcgtcctgcggccccgcgtcctcccagaggggggcggaccccggagagggc
ctcctggacccgggcggcgcggcgccgggcctcccgccgaacgaggcggcggccgaggcg
ctgcaagactgcatcaagcgggtgaaggacggcccgccctcgctcactaccgtctgcttc
tacgccttccatcacaccgaccagctgctgaatgcggccgagatctcggctgacagcaag
ctcctggccgccggcttcgacaactcggcggtgaagctgtggagcctgcgggcgcgcaag
ctcaaggcggagccgcaccgcgtggacgtgtcgcgcatccgcctggcctgtgacgttttg
gacgaggaggctgacgacgaggacagcgccggcagcgagatgaagatcctgcggggccac
tgcggaccggtctaccgcaccaccttcctgacggactgctcgggtctcctctcctgctcg
gaggacaccaccatccgctactggaacctgggcagcttcaccaacactgtgctctaccag
ggccacgcctacccggtgtgggacgtagacatcagcccctgcagcctgtactttgcgagc
gggtcccacgaccggacggcgcgcctctggaccttcgcccggacgtacccgctgcgcctg
tatgccggccacctggccgacgtggactgcgtcaagttccaccccaactcgaactacctg
gcgaccggctcggccgacaagaccgtgcgactgtggagcacccagcaggggagctcggtg
cgcctcttcacgggccaccggggccccgtcctggccttggccttctcccccaacggcaag
tacctggcgtcggccagcgaggaccagcgactgaaactctgggacctggcctcggggtcc
ctgttcaaggacctgcgaggccacacggacaccgtcactggcctgtccttcagccccgac
agcagcctggtggcctcctcctccatggacaactccgtacgggtgtgggacatccgcaac
tcccacggggggagcgcccccacggatggctcctccagcgagctggtgggcctgtacacc
ggcagcaccagcaacatcctgagcgttcagttcatggcgtgcaacctgctcctggtgaca
ggcaccgcccaggagaaacaggagcattag

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