Anguilla rostrata (American eel): 135247967
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Entry
135247967 CDS
T10705
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135247967 (ddx42)
Spliceosome [BR:
arot03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135247967 (ddx42)
Complex B
135247967 (ddx42)
Complex C
U2 SnRNP specific factors
135247967 (ddx42)
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NCBI-GeneID:
135247967
NCBI-ProteinID:
XP_064178067
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Position
2:38437256..38450062
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AA seq
918 aa
AA seq
DB search
MNWNKGGPGAKRGFGFGGFSLATGKKEEPRLPQPAHSSFGATASGYGKNQQLPSFYKIGT
KRANFDEENAYFEDDEEESSNVDLPYIPAENSPTRQQFQSHGSDSEEDPLDAFMAEVEDQ
ATKDLRKLEDKEKEKKPEKGIRDDIEEEDDQEAYFRYMAENPTAGLTQDEEEENVDYDSD
GNPIAPLAKKIILPLPPIDHSEIDYPPFEKNFYNEHEELNILTPIQVVELRQKLNLRVSG
AAPPKPSTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSGKTA
AFIWPMLVHIMDQKELQTGEGPIAIIVCPTRELCQQIHAECKRFGKAYALRSVAVYGGGS
MWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVRSVA
SHVRPDRQTLLFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQMVEILPSALEKW
GWLTRRVVEFTSAGSVLIFVTKKANSEELATNLTQEGYSLGLLHGDMDQSERNKVIADFK
KKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTNK
DTTFAGDLVRNLEGANQSVSKELMDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYRERPG
LGADTSDRGGSGSGSGILSNYESYKPSSGAMGDRMSAMKQAFQAQYKNHFVAASGLPPKV
TSTNSSSSAGWTSAGSLSSVPSGDPDEAERPRAAPPTGAAPQLSAGTRMAGFTSAGTLSS
LPEGYGNPPQGFPAPSAPREAPRDRHGDGRDRHGEGHYRHGDRHGGERERYGDRERHGGD
RERFADRERHGSGRYGDGRNGEGSRRDREGRGEREEWRGDRETGDRSGGEGRGDRSERAE
DSFAVPDPPKRKKTRWDS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaagggcggccctggggctaagaggggatttggtttcggcggtttcagc
ctggcaacaggcaaaaaagaggagccccgcttgccacagccagcacactcttcatttgga
gcaactgcatcaggatatggcaaaaaccagcaacttccctctttctacaagattggcaca
aaaagggctaatttcgatgaagagaatgcgtattttgaagatgatgaagaagagtccagc
aacgtggacctgccttacatccctgcagagaactctccaacacgacagcagttccagtcc
catggctcagacagtgaggaagacccattagatgccttcatggctgaggtggaggaccaa
gctacaaaagacttaaggaaactagaagacaaggagaaagagaagaaaccagaaaagggt
attcgtgatgacattgaagaggaagatgaccaagaggcctacttccggtacatggcggag
aaccccacggccggcctgacccaggacgaggaggaggagaacgtggactacgacagcgac
gggaaccccatcgcccctctcgccaaaaagatcatcctgcccctcccccccatcgaccac
tccgagatcgattaccccccttttgagaagaacttctacaacgagcacgaagagctgaat
atccttactcccatacaggtggttgagctcagacagaaactcaacctacgggtgtcaggc
gctgcccctcccaaacccagcacaagcttcgcccattttggctttgacgagcagctgatg
caccagatccgcaagtcggagtacacgcagcccacgcccattcagtgccagggggtcccc
atcgccctgagcggccgcgacatgatcggcatcgccaagacgggcagcggcaagacggcg
gccttcatctggccgatgctggtgcacatcatggaccagaaggagctgcagaccggggag
gggcccatcgccatcatcgtctgccccaccagagagctgtgccagcagatccacgcggag
tgcaagcgcttcgggaaggcctacgccctgcgctcggtggccgtgtacggagggggcagc
atgtgggagcaggccaaggccctgcaggagggcgccgaaattgtggtgtgcaccccgggc
cgcctgatcgaccacgtgaagaagaaggccacgtccctgcagagggtcacctacctggtg
ttcgacgaggcggaccgcatgttcgacatggggtttgagtatcaggtgaggtccgttgcc
agtcatgtgcgccccgacagacagactcttctcttcagcgctactttccgtaagaagatt
gagaggctggcccgggacatcctggtggaccccatccgcgtggttcagggagacatcggg
gaggccaacgaggacgtgacgcagatggtggagatcctgcccagcgcgctggagaagtgg
ggctggctgacgcggcgcgtggtggagttcacctctgccggctccgtgctcatcttcgtc
accaagaaggccaacagcgaggagctggccaccaacctgacgcaggagggctacagcctg
ggcctgctgcatggggacatggaccagagcgagaggaacaaggtcatcgccgacttcaag
aagaagaacctgcccgtgctggtggccaccgacgtagccgcccgtggtctggacatcccg
tcgatccgcactgtggtgaactacgacgtggcccgagacatcgacacacacacccatcgc
atcgggcgtacgggccgcgccggggagaaaggcgtggcctacaccctcctgaccaacaag
gacaccacattcgctggggacctggtgcgcaaccttgaaggagccaatcagagtgtctct
aaggagcttatggacctggcaatgcagaatccctggttcaggaagtcccgcttcaaggga
ggcaaagggaagaagctgaacattgggggtggtggcctgggctacagagaaaggcccggg
ctgggagcagacacctcggaccgtggtggcagtggcagcggcagcggcattctctccaac
tacgaatcctacaagccttcctccggggccatgggggaccgcatgtcggccatgaagcag
gccttccaggctcagtacaagaaccactttgtggcggcgtcggggctccccccaaaggtc
accagcaccaactccagcagctcggcgggctggaccagtgccggcagcctcagctccgtg
ccctcgggcgaccccgacgaggcagagcgtcccagggcggctccgcccacgggcgccgcc
cctcagttgagcgcagggacccggatggcggggttcaccagcgccgggaccctcagctcc
ctgcctgagggctacggcaacccgccccagggtttcccggctccctccgcgccccgggag
gccccgcgcgatcgccacggcgacgggcgcgaccgtcacggagagggccactaccgccac
ggcgacaggcacggcggagagcgcgagcgatacggcgaccgggagcggcacggcggagac
cgcgagcgcttcgccgaccgggagcgccacggcagcgggcgctacggagacggcaggaac
ggagaggggagccgccgggacagagaggggcggggcgagcgggaggagtggaggggtgac
agggagaccggggacaggtcagggggcgaaggcaggggggacaggagcgagagggccgaa
gacagctttgcagtcccagatcctcccaaacgcaaaaagacccggtgggacagctaa
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