Anguilla rostrata (American eel): 135248090
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Entry
135248090 CDS
T10705
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arot04121
]
135248090
Enzymes [BR:
arot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135248090
Ubiquitin system [BR:
arot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135248090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
NHL
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
ZNF512_C2HC
YscO
Motif
Other DBs
NCBI-GeneID:
135248090
NCBI-ProteinID:
XP_064178376
LinkDB
All DBs
Position
2:complement(42283415..42287521)
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AA seq
716 aa
AA seq
DB search
MKNKLNQEETFETVRSTPKGASLSFIKTGTNTMAEGKGNISEKIEEEFLQCKICFEVYRT
PRTLSCLHSFCEPCLELLLDKQKGTVTCPECRAVSDLQGCVRNAKASFFINSLLDLFRSK
TTEQTACSLCPALGKSAVPASSRCLDCADFLCTSCAQGHCLSKLTLEHRVVSLEDYVAGR
YDEEARRKQERHCQNHQEPLRFYCNTCSSTICRDCRMLEHFSHEVLSLAQATTARRPQLE
KLIGSLDGNIRSLSQQEQEVGSAIQQLKEAESVIIDQLAGHISLIMEQLFTQRDAVSKEL
SDFIQQQEQKYLSIKSDLCDHVNSAQNTKDFSSQVMQKGKDYEILDLEQTIQGQIERLKK
VSIPVVETKTPLLMIKEDIDLSSGMFQLMFDVHADSQKSPNVSDTGLKQEPQTSAPKTAE
TCAQTSTPPQAQPAQAMQQIPPPSPCGNQHSDIPSSFSLIRFFDTDDDESRNHENITGIS
LFPSRDIVIADTSNFKIKRVIRNGQIRETITTEDRGWNDINPFSVAVCDDTIFFTSGSRL
FKVPEDQCDDIVQVCNLRGSHNEYCIAAYQNEYIAVSEGTSCSLSLYEPNGVLVDRVNPD
YEGKFVFLAVNSMEEFIICDTMKKCIIVLNRAEQILNICSSADSYSFNPRSVCVDKWSNI
YVVEGKRIVLLSPSGDFVRQLFSFSGYTPKLIAADDHGHLIMVNKKGNVRIYKAQL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagctaaaccaggaagaaacttttgaaacagtccgatcgacgccaaagggc
gcttctctttcgtttattaaaacggggaccaacaccatggctgaaggtaaaggcaacatc
tcagagaaaatagaagaggagttcctgcaatgtaagatctgttttgaggtgtacaggaca
cctcgcaccctgtcctgccttcattctttctgtgagccatgtttggagctgctgctggac
aaacagaaaggcacagtgacctgtccagagtgccgcgcagtcagtgacctgcagggctgc
gtccgcaatgccaaagccagctttttcatcaacagcctcctggaccttttccgatccaag
accaccgaacaaacagcctgttcgctgtgtccggccttgggtaagtctgctgtgcccgcc
tcctcgcgttgtttggactgcgccgacttcctgtgcacgtcctgcgcccagggccactgc
ctctccaagctgacgctggagcaccgagtggtgagtctggaggactacgttgctgggcgc
tacgatgaggaggccaggagaaagcaggagcgccactgccagaaccaccaggagcctctg
cggttctactgtaacacctgctccagcaccatctgcagggactgtcgcatgctggagcac
ttctcccacgaggtgctgtccctggcccaggccaccacagccaggaggccccagctagaa
aagctcatcggcagcctggacggcaacataaggagcctgtctcagcaggagcaggaggtg
ggctccgccatacagcagcttaaggaggcagagagcgtcattatagaccaactcgccgga
cacatatcacttataatggaacagcttttcactcaaagggatgccgtttctaaggaactg
tccgacttcatccaacagcaggagcagaagtacctgtcgattaaaagtgatctctgtgat
catgtcaactcagcacaaaataccaaagacttctcctcacaagtcatgcagaagggaaag
gactatgaaatcctggatctggagcagaccattcagggccaaattgagagacttaagaaa
gtcagcatcccagtcgttgagacgaaaacccctttgctgatgataaaggaagatatagac
ttgtccagtggaatgttccaattaatgtttgacgtacacgcagattcacagaagagtcca
aatgtgtctgacaccggcctcaaacaagagccacagacatcggctccgaaaactgctgag
acatgcgctcaaacatccacccctcctcaagctcagccagctcaggccatgcagcagatc
ccgcctccaagtccatgcgggaaccaacacagcgacattccaagttcattctctttaatc
cgtttttttgacacagatgatgacgagagcagaaatcacgagaacataaccggcattagt
ctgttcccaagccgggacatagtgattgcagataccagcaacttcaagatcaagagagta
atccgaaatggacaaattagggaaaccatcaccactgaagacaggggctggaatgacatc
aaccctttcagtgttgcggtgtgtgacgacaccattttttttacatcaggatctaggctg
ttcaaggtcccagaggaccaatgtgatgacatagttcaggtctgcaacctgcgagggtcc
cacaacgagtactgcattgcagcttatcagaacgaatacattgcggtgagcgaaggcact
tcctgctctctgtctctgtacgaacccaatggcgtattagtggacagagttaatcccgac
tatgaaggaaaatttgtttttttggcggtgaacagcatggaagagttcatcatctgtgac
acaatgaagaagtgcattatcgtcctgaaccgtgcagagcagattctaaacatatgcagt
tctgctgattcttattcttttaatcccaggagtgtctgcgtggacaagtggagcaatatc
tatgtcgtagagggtaagaggatcgtgctgctctcgcccagtggtgattttgtgcgccag
ctgttcagcttctctgggtacacaccgaagcttatagctgcagatgatcatggacacctc
ataatggtcaataaaaaaggaaatgtcaggatctacaaagcccaactgtag
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