KEGG   Anguilla rostrata (American eel): 135248416
Entry
135248416         CDS       T10705                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:arot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    135248416 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arot03400]
    135248416 (tdp1)
DNA repair and recombination proteins [BR:arot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     135248416 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 135248416
NCBI-ProteinID: XP_064179115
LinkDB
Position
1:13254154..13283635
AA seq 624 aa
MSQESQHGKWTMSSSDDEEDAPPVVSKPTEQLSAREPADTEGGSKNTHAFFRTSQKSDPI
PNTNIKVESRSSSISSKAIGSEARQAAHSNQQNPVKFETKVPSPAVKRKKETEESGWALS
SSDDESPDSVSGSQMKRRSPSPKRKKVEDKQPPSPHGTSYYKEEAEEFFETSLPPSESTF
RFYLTKVTGIEKKYNTGALHIKEILSPLFGTLKESVQFNYCFDIPWMVQQYPPEFRDKPV
MIVHGEKRESKARLIQQAQPYGHIRFCQAKLDIAFGTHHTKMMLLWYEEGFRVVILTSNL
IRADWYQKTQGLWLSPLYPRLPEGSPGSAGESPTNFKRDLIEYLEAYRAPELAEWIERIK
EHDLSETRVYLIGSAPGRYQGTDMERWGHLRLRKLLRENTRPILGEESWPIIGQFSSIGS
MGIDKTKWLAMEFQQTLATLGSAKKSSAGSETTMHLVYPTVDNVRTSLEGYPAGGSLPYS
IQTAQRQLWLHSYFHRWSSESSGRSHAMPHIKTYMRTSPDFTELAWFLVTSANLSKAAWG
ALEKNNTQIMVRSYELGVLYLPSAFNMTKFTIQKNPFPVTGSSSSFPVPLDLPPQRYSSK
DQPWIWNIPYTQAPDTHGNVWVPS
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgtcacaggaaagccagcatggcaagtggacaatgtccagcagcgatgacgaggaagac
gcacctcctgtcgtgtcaaagcccacagagcagttgagtgcacgtgagcctgctgataca
gaagggggctcaaaaaatacacacgctttttttcgcacgagccagaaatcggacccgata
cccaacacaaacattaaagttgaatcgcgctcttcgtcgatatcttccaaagccattggt
tctgaggccaggcaagcggcccatagcaatcagcagaatcctgtgaagttcgaaaccaaa
gttccatctcctgctgtcaaaaggaagaaggaaacggaggagtctggttgggctctttcc
agcagtgatgacgaaagtcccgactctgtttctggaagccagatgaaaaggcgaagccca
agtcccaagaggaagaaggtggaagacaagcaaccaccgagtccacatggtacctcttac
tacaaggaagaggctgaagaattctttgaaaccagcctgcctccgtcggaaagcacgttt
agattttatctcacgaaagtgaccggtatagaaaagaagtacaacactggggctttgcac
attaaagaaattctctctcccctctttggaactctgaaagaatctgtgcagtttaactac
tgctttgatatcccctggatggtacagcaatacccaccagagttcagggacaagccggtg
atgattgttcacggggaaaaacgtgaatccaaggccaggttaatccagcaagctcagcct
tatggacacatccgtttttgccaggccaaattggatatagcttttgggactcatcacacg
aaaatgatgctgctttggtatgaggagggattccgcgttgtgattctcacatctaacctc
atccgtgcagactggtatcagaagacacaggggctgtggctgagcccactgtatcccagg
ctaccagagggcagccctggctcagccggggagtctcccaccaacttcaaacgcgacctc
atcgaatacctcgaggcctaccgcgcccccgagctcgccgagtggatcgagcgcatcaaa
gagcacgacctgtctgaaaccagagtgtatctgattggttctgcccctgggcgataccaa
ggcactgacatggaaagatggggacacctgagactgaggaagcttttgcgtgagaacacg
aggcctatccttggagaggaatcctggcctatcataggccagttctccagcattggctcc
atgggcatcgataagacaaaatggctggccatggagttccagcagaccttggcgactctt
gggtcagccaagaaatcttccgccggctcagagaccacaatgcacctggtctatcccaca
gtggacaatgtgaggaccagtctggaaggatacccagctgggggatctctcccctacagc
atacagacagcccagaggcagttgtggctccactcctacttccaccgctggtcatcggag
agttcaggcaggagccacgccatgccccacatcaaaacctacatgaggacatcgcccgac
ttcacagagctggcctggttcctcgtcacgagtgccaatctgtcaaaagccgcttggggt
gccttggagaagaacaacactcagatcatggtgcgctcgtatgagctcggcgtgctctac
ctgccttcagcgtttaacatgaccaagttcaccattcagaagaacccatttcctgtcacc
ggctcttcttcctcctttcctgtgcccttggatctcccaccccagcgctacagcagcaaa
gatcaaccttggatctggaatattccatacactcaagctccagacactcatgggaatgtg
tgggtgccttcatga

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