Anguilla rostrata (American eel): 135248856
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Entry
135248856 CDS
T10705
Symbol
tnrc6ba
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
arot Anguilla rostrata (American eel)
Brite
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135248856 (tnrc6ba)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135248856 (tnrc6ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
135248856
NCBI-ProteinID:
XP_064179925
LinkDB
All DBs
Position
2:64180080..64200701
Genome browser
AA seq
2079 aa
AA seq
DB search
MEDKKRKKEEKRKRENSQKVAEQKNKVPELTKPTSSQSPATPSSASPNPGPAPSPSPATA
AAGAPPQGGNNAKRPAVANGQPPSGAPVPQRYMPREVPPRFRCQQDHKVLLKRGQPPLSC
MLLGGGGGGTPLPQGDAPGATAAAASDSSPGALGSAVPSLPHSSSSSVAASSTTTSSNYA
NSTWGASSGSQPPSQGWEKVIVDGSDLEEWPSIAAGAGAGAGAGDAAGGTLSSSASWSDR
QLQQQQKVVGAGAGAGKGGGSGSPSPPSSSCSPNECTQPGSGVWGSSSQASGGGGAAVAP
APSKSKAGPLPGTPDGSVAGSGGIPGANFNPSANPSAWPALVQDGTAGTGAARADSATPP
PMPNPLLLSANPSLNHPSPSANPAGHQHLHQMQARERESLCGEWPGAGPEPGTGPKKAGA
VAEEEPECGTSGGGDGPTSSSSSTASSSSWRAQPFSSEPKAVSPRTDPWEGTAGAGVASG
EGGGSWAYGGQEGKGAGGKAWGAGNGGGSKAPGVSQGAWGGAGGAELSVGEWGKSAGGGA
GPNNPVGGGGCSSTSSSSEGSVGNPPTSSSPNSASMTRAWDNQKGAGDGGAGETGEWGAQ
GKGGTSSSSGGGHSRAGSGAHNQHHGHGHHRVHIPPNPEAALQNLLSRTDLDPRVLSNTG
WGQTQIRQNVAWDLEVGGSGGGGGPSAAPNTAGLAPPYSAAAASPTTSDASAPSPLPGGG
PKAGLSSSAAVGEGWDSGSGSSSNNSTASLSTRGPAPSGPTARAPGAPQPGGNPAGPQGK
SAGGWGRSSPPESQGKGWGSEGQDWRENRGGGGGGGGGGGGGGGGGWGDFGQQGTPAGGG
SSGWGGQEEKGMGGWKEVGRDGGGWGQRGGEEEEEEEGGGDWGXRESKSGSGGWGXRKGG
GGGGGGGRGAGGDAEVGTWGSWDEATPRRGWGGGGAGGDAGGKSHQGWGGKGHQSQIPNS
QSAMMKTPGQQPPQPQPVEPAPLQGGWGKPAGLVSHNQNQSSGWAPGPAPRLPSGPTEGP
EPSGWEEPSPQSISRKMEIDDGTSAWGDPNHYNYKSVNLWDKNGAPAGQPPPLHAQPQPP
AQPPQQKQQQGPGPGPAQQQQQQPPGRPAHQHVPPGNRDMNPGHMPAKASGMVWGGGGPP
SSPSVDNGTAAWGKPTEAHSSWGDPEDSGKASGWGNLSPNPIKSGSKSMQEGWGEGEGSV
SASRHSSWEEEEEGTGVWSSAGSQGSSSSYNSGGWGQGHGAKKGSSKGALKGGGGDSWMN
PMTRQFSNMGLLGEDPSGRPLDLAPGPPQDKKLEGEKRGMSLSDYNGEIRKGGRGGAGGG
GTVFRSPSSKEVGPGEPGPYYDKTGGHSVFGGSGGMAQSRGVHQPGVPPINPSPGIRAQV
PHQFLSPQLPSSMLKQMPPPSSSVGGVGGVAGGVFPPQLSPQHIAMLSSIYPPHIQFQLA
CQLLLQQQQQQPQQQQQQQQQQILQNQRKFPQNIRQQPDPQQLARIMAVLQQQRQQQQGG
GGGGGGGSKLSPSHLGGVAPPKPTMADPLSHPGLGGTLADLHSKTQGGYSGFGSGVNLSG
LEMGSMVGGPGAMKDSGGQQSRFKWIMEGHSPAPSPPDSVLHKNGPISAPVKLRGGSPYS
QYELLGGEGLGVPPQGPSDNWHRTPGNKMGTKTGSSSWPPEFQPGVPWKGIQSADPESDP
YMTPGSVLGSSGTSGLNDTEHQLLRDTESNPSLNTLLPSPGAWPYSASDSPLSNAHTSAK
YTEYKPSWPPDPIGHNKPWKANRNSSQMPRPPPGLTHQKQPPLSSWAGGGPRLARGWGGS
GGSQESRYGPGSAWSDAGARGSCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGS
ALICYSSRQEAAKAQSALHMCVLGNTTILAEFVSEEEVARYFAHSQAGGSGSGGGGGAVP
GSGGGQGPSGTGAVGASGGGSTPGSERERAPGAAGAAGGGGTAGGGNGGGAGASIGSVGP
SASGWQSLDSSGSSPDPSSAQGPGLSIFAQWSSNGAGGGGVSGGTGGVEPGRQGLWGAMT
PGYPSSSLWGAPTMEDRHQMGSPAALLPGDLLGGGTDSI
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaagaaagaagaaaaaaggaaaagggagaattcccagaaggtc
gcagaacaaaaaaacaaagtgccagaattgaccaagcctacgtcctcccagtctccggcc
acccccagctctgcgtcccccaaccctggccctgccccctccccctcccctgccaccgcg
gctgctggggccccccctcagggcgggaacaatgctaagcggccggcggtggccaacgga
cagcccccctccggcgccccggtcccccagcgctacatgccccgcgaagtgcccccgcga
ttccgctgccagcaggaccacaaagtgctactgaagaggggccagccgccgctgtcctgc
atgctgctgggcgggggcgggggaggcacccctctcccgcagggggacgcccccggcgcc
acagcagctgctgcctcagattccagtcctggggccctgggttcggccgtcccctcactg
ccccactcctcctcctcatcagtcgctgcttcttctactactacttcttcaaattatgca
aattccacgtggggggcgagctctggcagccagcccccctctcagggctgggagaaggtg
atagtggacgggtctgacctggaggagtggcccagcatcgcggcgggggcgggggctggg
gccggggcgggggacgcggcgggtgggaccctgagcagcagtgcctcatggagcgacagg
cagctccagcagcagcagaaggtggtgggggcgggagcgggggcggggaaagggggcggt
tccggcagcccctccccgccctcttcctcctgctcgcccaacgaatgtacgcagcccggc
agcggcgtgtggggctcctcctcccaggccagtggcggggggggcgcggccgtggccccc
gccccttccaaatccaaagccggccccctccccggcactccggacggttccgtcgctggc
agcggagggatccctggtgccaacttcaaccccagcgccaacccttctgcctggcccgcc
ctggtgcaggatgggacagccgggacgggcgcggccagggccgacagcgccaccccccct
cccatgcccaacccgttgcttctgtccgccaacccctccctcaatcatccctccccatct
gccaatcccgccggtcatcagcaccttcaccaaatgcaagccagggagagggagagcctc
tgcggggagtggcccggggcggggcctgagccaggaacaggaccaaaaaaagcgggggcg
gtggccgaggaggagccagagtgcgggacgagcggaggaggcgacggcccaacctcctct
tcctcctctacagcttcctcctcctcgtggagagcccagcccttctcctccgagcccaaa
gcggtctccccgaggactgacccgtgggagggcacagcgggagcgggcgtggcctctggg
gagggagggggttcgtgggcgtacggaggtcaggaggggaagggggcgggggggaaagcc
tggggcgcaggaaatgggggcggcagtaaggcccccggggtatctcagggagcgtggggc
ggggccggcggggcggagctttcagtcggcgagtggggtaagagcgcgggcgggggggcg
gggccgaacaatccggtagggggaggcggctgcagcagcaccagcagcagcagcgagggc
agcgtagggaaccctcccacctcctcctccccaaattcagcttctatgacaagagcttgg
gacaatcagaagggtgcgggagacgggggtgcgggggagacgggcgagtggggggcccag
gggaagggcgggacctcgtcgtccagcggcggcggacactcccgggccgggagcggcgcc
cacaatcagcaccacggccacggccaccaccgcgtccacatcccccccaaccccgaagcg
gccttacagaacctgctcagccggaccgacctggacccccgcgtgctgtccaacaccggc
tggggccagacccaaatccggcagaacgtggcctgggacctggaggttggcgggagcggc
gggggcggcggcccctccgcggcgcccaacaccgcgggcctcgctcctccatactctgcc
gccgccgccagcccgacaactagcgatgcgtcggcgccttcccccctccccggcggcggc
ccgaaggcgggcctgagctcgagcgcagcggtgggcgaaggctgggacagcggcagcggc
agcagcagcaacaacagcaccgcctctctgtccacccgaggccccgccccctccggcccc
accgcacgcgccccaggggccccgcagcccggaggaaaccccgccggcccccaggggaag
agcgccggggggtggggccggagcagtccgcccgaaagccaagggaaaggctggggcagc
gagggccaggactggagggagaacagaggaggaggcggaggagggggaggagggggagga
ggaggaggaggaggagggtggggagatttcggtcaacagggtaccccggctggaggcggc
agcagtggctggggaggtcaggaggagaaagggatgggaggctggaaggaggtggggagg
gatggaggaggctggggtcagagaggaggggaggaggaggaggaggaggaggggggcggg
gactggggangacgggaatcaaagtcaggaagcgggggctgggggngaaggaaagggggg
gggggtgggggtgggggagggaggggtgctggcggggatgccgaggtgggaacgtggggc
agctgggacgaggccacgccccggagaggctggggagggggcggggcagggggggacgcg
gggggcaaatctcaccagggttgggggggtaaagggcaccagtcacagataccaaacagc
cagtcggccatgatgaagacgcccgggcagcagccgccgcagccccagccagtggagccg
gcgcccctgcagggcggctggggtaaacccgcgggtctcgtctcccacaatcagaaccaa
agctcaggctgggccccggggcccgcacctcgcctgcccagcggccccaccgaaggcccg
gagcccagcggctgggaggagccgtcgccgcagtccatcagccgaaagatggagatcgac
gacgggacctccgcctggggcgaccccaaccactacaactacaagagtgtcaacctgtgg
gacaagaacggcgcccccgctgggcagccgccgccactgcacgcccagccccagcctccg
gctcagccgccgcagcagaagcagcagcagggccctggccctggccccgcccagcagcag
caacagcagccgccgggaaggcctgcccatcagcacgttccccccggcaacagggacatg
aaccctggacatatgcctgccaaggcctctggaatggtttggggaggcggcggtcccccc
tccagcccctccgtggacaacggcacggccgcctgggggaagcccaccgaagcacacagc
agctggggtgacccggaggattctgggaaggcctcaggctgggggaacctctcccccaac
ccaatcaaatctggctcaaagtctatgcaagagggctggggcgagggcgagggctctgtc
agtgcgtcccgccactccagctgggaggaggaagaggaggggaccggcgtgtggagcagt
gcggggtcccagggtagcagctcctcctacaactccgggggctgggggcagggccacggg
gccaagaagggcagcagcaagggtgccctgaagggcggcggcggggactcctggatgaac
cccatgaccagacagttctcaaacatggggctcctgggcgaggaccccagcgggcggccc
ttggacctggccccgggccccccccaggacaagaagctggagggagagaagcgagggatg
agcttgagcgactacaacggagagatacgcaagggcgggagaggcggagcaggaggaggg
ggaacagtcttccgttcgcccagttccaaagaagtggggccaggcgagcctggtccttac
tatgacaagacgggtggtcacagtgtgtttggtggaagtggtgggatggcccagtctcga
ggggtgcaccagcctggtgtgccgcccattaacccatccccagggatacgagcgcaagtg
cctcatcagttcctgtcacctcagctgccgagctccatgctgaagcagatgccccctccc
agcagcagtgtggggggagtgggaggggtggcagggggggtgttcccacctcagctctct
ccccagcacatcgccatgctcagcagcatttatcctcctcacatccaattccagctggcc
tgccagcttctcctgcagcagcagcagcagcagccccagcagcagcagcagcagcagcag
cagcagatcctgcagaaccagaggaagttcccccagaacatacgacagcagccagacccc
cagcagctggcaagaatcatggccgtccttcagcagcagagacagcagcagcagggcggg
ggcgggggcggcggcgggggctccaaactgtccccctctcacttgggaggggtcgccccc
ccaaaaccgaccatggccgatcccctgtctcaccccggcctggggggcaccctggccgac
ctgcattcgaaaacgcaggggggctactctgggttcggctcgggggtgaacctgtcgggg
ttggagatgggctccatggtgggcggtcccggcgcgatgaaggacagcgggggccagcag
tcccgcttcaagtggattatggaggggcactcccccgccccctcgcctcccgacagcgtg
cttcacaagaacggccccatctcggctccggtgaagctgaggggaggttccccctattcc
cagtacgagctgctggggggtgagggtttgggggtcccccctcagggtccgtctgataac
tggcatcgaacccctggaaacaaaatgggaaccaaaactggctcctccagctggccgcca
gagttccagcccggagtgccctggaagggaattcaaagtgctgatccggaatctgacccc
tacatgaccccaggcagtgtgttgggctcctctgggacgtccggcctgaatgacaccgag
caccagttactgagagacacagagtctaacccctccctcaacaccttgctgccttcacca
ggtgcctggccctacagtgcctcagacagccccctcagcaatgcacacacctcggcaaag
tacactgagtacaaacccagctggcctcccgatcccattggacacaacaagccctggaag
gccaatcggaacagctcgcagatgccacgcccacctcctggacttacacatcagaagcag
ccccccctctcctcttgggcggggggaggcccgcgattggccaggggttggggagggtct
ggcggcagccaagaatcaagatacgggccagggtctgcatggagcgatgcaggagcccgg
ggcagctgctggctggtactgagcaacctcactccacagattgacggctccacgctgcgc
acgatctgcatgcagcacggccccctgctgacctttcacctcggcctgacccagggcagc
gccctcatctgctacagctcccgacaggaagcggccaaggcacagagcgctctgcacatg
tgcgtactgggcaacaccacgatcctggcagagtttgtgagcgaggaggaagtcgctcgc
tattttgcacattcccaggcgggagggagcggcagcggaggcggcggcggagcggtcccc
gggtccggaggaggccaggggccctcggggacgggcgcggtgggggccagcggcggaggg
agcaccccggggagcgagagggagagggcgcccggggcggcgggagcggcgggcggagga
ggaacggcgggcggaggaaacggcggcggggcgggggctagcataggaagcgtggggcct
tccgcctccggctggcagagcttggacagttcgggcagctctccggacccctcctcggcc
caaggaccagggctgagtatttttgcccagtggagcagcaacggagctgggggaggagga
gtgagtggaggtacagggggtgtggagcctggccggcaggggctgtggggtgcaatgacc
ccggggtaccccagcagcagcctgtggggagcccccaccatggaggacaggcaccagatg
ggcagccctgcagcactgctacctggggacctgctaggtgggggaaccgactcaatctga
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integrated database retrieval system
