Anguilla rostrata (American eel): 135250072
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Entry
135250072 CDS
T10705
Name
(RefSeq) protocadherin alpha-C2-like isoform X1
KO
K16493
protocadherin alpha
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arot03036
]
135250072
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arot04515
]
135250072
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
135250072
Cell adhesion molecules [BR:
arot04515
]
Cadherins
Protocadherins
135250072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
SRTM1
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
135250072
NCBI-ProteinID:
XP_064182033
LinkDB
All DBs
Position
3:complement(10110877..10232266)
Genome browser
AA seq
985 aa
AA seq
DB search
MARIGCCNSIKKNVPIYFYLVFLLFGGLASAQIRYSIPEEREDGTVVGDIVQDLGLDLRT
LSSRRIKITSDSAKRYFGINHKTGKLVVNDRIDRETLCEFSSTCLLNLEVVAENPFEVHN
VEVEILDANDNAPQFPRDEYQLDVSESTLPRARFHVESAQDPDDGSNSIRQYQLSPNELF
ALESKKPSPNSKLVELVLKKALDREQIPFHQLILTAIDGGSPQRTGTAKINVRVLDSNDN
VPVFDSSVYKVKLLENSPKDTLVIKLNATDADEGTNGEVIYSFSSYTPERVRQVFNMDPN
TGEIRVRSQVDYEETSSYEMYVQAMDKGAGAEAVHCKVVVEVVDVNDNVPEIVLSSLSSP
VREDARADTVVALISVTDRDSGPNKQVSLDIPPGLPFKVKSFRNYYTLVTSAFLDREDTA
AYNVTLSATDSGTPPLSSKKTIQIDVADVNDNPPRFEQTSYTVYVVENNTPGASLCTVKA
QDADINENARITYTVLNDNNHGIPVTSYVSVRADTGEAYALRSFDYESLREFHFQVKAQD
GGIPPLSRVATVYIYVLDQNDHVPEIVYPPANGTRTTETVLKNVEAGHLVMKVAAYDADA
GRNAWLLYSLEQATDPDLFKMHEHTGEIRTTRKIVEDNSTFFSLMVVVRDNGAPSLSSTA
TVNVAVMEVPPKMTPDPKKIIKPHRTLIFSNVTLYLIVALSATTFVFLLTVVVLAIVRCH
AYCTQSGSCCPCCTSQKTPPQTGAAGGGAGGASGQQPNNNVVLRRDLKVEPHYIEVRGNG
SLTKTYCYKTCLTATSGSDTFMFYNTGCPPGGTMGSERFFTGQSGQMFVRRLSMPDAALQ
PKPPNADWRYSASLRAGMQSSVHMEESSVMQGAQGVLVQNWPTVSSAADAEGGEVSPPVG
AGINSNSWQFRYGPGPGPPQHLKPGEVPEAFIIPGSPAIISIRQGAGDGDDKGDFISFGK
KEEKKKKKKKKGKEKKEKGKDDGEE
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtatagggtgctgtaacagcataaagaagaatgtgcctatttatttctatttg
gtgtttttattattcggtggccttgcatctgcacaaatacggtactctattcccgaggaa
cgagaagacggaacggtcgttggagatattgtgcaggatttgggtctcgatctccgaact
ctctcctcgcgacggattaaaatcacctcggacagcgcaaagaggtatttcggtattaat
cacaaaactggaaaactggttgtgaatgacagaatagacagagagacgctttgcgagttt
agtagcacatgccttttaaatctggaggtggtggctgaaaatccgtttgaagtacataat
gtggaagtagaaatactggatgcgaatgacaatgcgccgcagttcccaagagacgaatac
cagctggacgtttcagaatcgactttacccagggctcgttttcatgtcgagagcgcgcaa
gatccggatgatggctccaattctattcggcagtaccaactcagtccaaacgaattattt
gcgctggaatccaagaaaccctcgccaaacagcaagctggttgagctcgtgcttaaaaag
gctctggatcgcgagcagatacctttccatcagctcattctgaccgccatagacggaggc
tctcctcaacgaactggcacagctaaaataaacgtgcgtgttttggattccaatgacaac
gtcccagtgtttgacagttcagtatacaaagtgaaattgttagaaaactcgccaaaggac
actcttgtgataaagctaaatgcaacagatgcagatgagggcaccaacggagaggttatc
tactccttcagcagctacaccccagagagggtcaggcaagtgttcaacatggacccaaat
acaggggagatcagggtcaggagtcaggtggactatgaggagaccagctcctatgagatg
tacgtccaggccatggacaagggtgccggggcggaggccgtgcactgcaaagtggtggtg
gaagtcgtggacgtgaacgacaacgtcccggagatcgtgctgtcctccctgtccagcccg
gtgcgggaggacgcccgggccgacacggtggtggccctgatcagcgtgacggaccgcgac
tccggccccaacaagcaggtgagcctggacattcccccgggcctgcccttcaaggtgaag
tccttccggaactactacaccttggtgacgtccgctttcctggaccgggaggacaccgcc
gcctacaatgtcacactgagcgccaccgactcggggacgccgcccctctcctccaagaag
accatccagatcgacgtggccgacgtcaacgacaacccgccgcgcttcgagcagacgtcc
tacaccgtgtacgtggtggagaacaacacccccggggcgtccctgtgcaccgtcaaggcc
caggacgccgacatcaacgagaacgcccgcatcacgtacaccgttctcaacgacaacaac
cacggcatcccggtcacctcctacgtgtccgtgcgggcggacacgggcgaggcctacgcc
ctgcgctccttcgactacgagagcctgcgggagttccacttccaggtcaaagcgcaggac
ggcgggatcccgcccctcagccgcgtggccaccgtctacatctacgtgctggaccagaac
gaccacgtccccgagatcgtgtacccgcccgccaacggcacccgcaccaccgagacggtc
ctgaagaacgtggaggccgggcacctggtgatgaaggtggcggcgtacgacgccgacgcg
ggacggaacgcctggctgctctacagcctggagcaggccaccgacccggacctgttcaag
atgcacgagcacactggcgagatccgcaccacccgcaagatcgtggaggacaactccacc
ttcttcagcctgatggtggtggtgcgggacaacggcgcgccttcgctgtcctccactgcc
accgtcaacgtggcggtgatggaggtgccgcccaagatgacccctgaccccaagaagatc
atcaagcctcacaggacgctgatcttctccaacgtcacgctctacctgatcgtggcgctc
agcgccaccaccttcgtgttcctcctgaccgtggtggtgctggccatcgtccgttgccac
gcctactgcacccagtccggctcctgctgcccctgctgcacgtcccagaagaccccgcct
cagaccggcgccgctggcggcggggcaggcggggccagcgggcagcagcccaacaacaac
gtagtgctgcggcgcgacctgaaggtggagccgcactacatcgaggtgcggggcaacggc
tccctgaccaagacttactgctataagacctgcctgaccgccacgtcgggcagcgacacc
ttcatgttctacaacacgggctgcccgccggggggcaccatgggctcggagcgcttcttc
acgggccagagcggccagatgttcgtccggaggctcagcatgccggacgccgcgctccag
cccaagcccccgaatgcagactggcgctactcggcctcgctgcgagctggaatgcagagc
tcggtgcacatggaggagtcctcggtgatgcagggtgctcagggggtcctggtgcagaac
tggcccaccgtctccagcgctgccgatgctgagggtggcgaagtgtcgcctcccgtaggt
gcgggcattaacagcaacagctggcagttccgctacggcccgggccccggccccccgcag
cacctgaagccgggcgaggtgcccgaggccttcatcatcccggggtcgcccgccatcatc
tccatccgccagggcgccggcgacggagacgacaagggcgacttcatctccttcggcaag
aaggaggagaaaaagaagaagaagaagaagaagggcaaggagaagaaggagaaaggaaag
gacgacggagaggagtag
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