Anguilla rostrata (American eel): 135250348
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Entry
135250348 CDS
T10705
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04510
Focal adhesion
arot04512
ECM-receptor interaction
arot04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135250348 (col4a2)
Glycosaminoglycan binding proteins [BR:
arot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135250348 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135250348
NCBI-ProteinID:
XP_064182620
LinkDB
All DBs
Position
3:17671749..17736835
Genome browser
AA seq
1684 aa
AA seq
DB search
MKSEVRMDGAMQVRRRIEFKSLRFSLNTLTTLCLIILVLLTTEVQAGGKKYNQPCGGRDC
SGGCKCFPEKGARGQPGPLGPQGGQGSPGRPGEPGVIGPKGEKGDRGRGGITGPKGSVGM
TGVPGFSGMDGIPGHPGQAGSRGKPGADGCNGTRGDDGTQGRTGLHGYAGHPGNPGRKGE
KGDSLEVSVFMERFRGERGDRGFPGYTGPAGLPGLTGRQGHVGPQGPPGFPGPPGPKGTM
TKTLKGQKGEPGDAGEPGPPGNSTHPHTKTPSGLPGLKGEKGFQGERGDLADNWVIGEVG
VMGYPGQRGSPGLDGQPGETGDAGEPGQGGRDGAKGERGEPGEFIPIGPIPPAPPGPNGQ
PGPQGEKGEPGEKGLPGTPGTPAYPTSETRFNKGSFGPKGFKGSKGPDGDPGIPATVPGP
PGYDGYPGDPGAPGERGSWGNEFRGPKGEIGQPGAGGQQGQKGDEGLCQCDNVNSPPGPP
GPPGSPGIQGMSGEWGQQGDPGSPGPRGAPGLPGLQGQEGLPGPKGSKGRPMKATQKGFP
GDPGDPGTTGNQGESGQPGPIGSPGAPGLRGRPGEGPVGPPGEKGGPGRPGAPGRAGLMG
EPGVVLGAKGLPGLPGDAGYDGFDGSPGPPGVQGGCVLEGNRRREDGTGECDPVPGPAGK
PGLPGPIGLDGSQGTPGPKGFQGLFGEEGLKGEQGDPGRGGPMGHPGFVGPRGDRGSPGS
KGRQGSPGDLGRRGLDGEPGQKGNHGEVVGASTGPSGEPGPPGLQGAKGNIGDPGQPGYP
GMEGMPGILGSKGELGPPGLQGEEGRPGPPGKYGFRGFPGQTGPPGSPGSIGEPGPAGDR
GDDGDPGPPGPFGRKGIPGEPGSVGPKGNEGQQGNPGLPGRPGHAGLPGVKGSRGSTGMT
GFEGMPGVKGKLGFAGQKGEQGFSGTPGYKGAMGKKGVKGDRGLQGPPGEKPYIPPYMMK
EMKGTKGDHGKLGDYGFVGPRGSKGYPGLPGGTGTDGMPGEPSDEKGAKGNFGAEGLPGH
KGMPGLPGQPGIQGFPGMTGHRGEKGTPGAYGRSGEDGVKGRKGEGGPIINLPGPTGERG
NPGFPGQLGVKGFNGLLGERGSSGFNGIDGLKGEKGQPGTEGPAGSDGKNGSPGHHGHKG
WPGTPGEPGFGGHPGLPGQRGFPGLKGIFGLDGLKGQKGIPGVPGSDNGGLAGDPGTKGE
KGEAGIPNTERGLPGLLGSKGSRGDSGDQGEPGPPGFQGPPGIHGISDIQGAQGDPGFPG
AKGHQGFPGFQGRPGVPSTSGSKGDRGQPGPFGERGSIGTQGDQGQQGFPGRNGLSGNKG
ATGEQGLMGTPGRPGFKGDKGPVGPKGNTGFPGFPGVPGDQGPVPTPPKQPGERGPPGAH
GIRGPEGHRGEFGPQGPPGDPGFMGPQGQKGMPGVSGTPGTPGYRGDVGQGGHQGLQGLQ
GSPGRPGAPGITGMPGRSVSVGYLLVKHSQSDQTPMCPVGMAKLWDGYSLLYFEGQEKAH
NQDLGLAGSCLPRFNTMPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEETEIRPYI
SRCSVCEAPSVAIAVHSQDTTIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCL
EDFRTTPFIECNGAKGACHYFANKQSFWLTSIEHSFQSRPAAETLKAGQQLSRISRCQVC
MKNL
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgaagtacggatggacggggccatgcaggttcgacgcaggatagaatttaaa
agtttaaggttttcgcttaacacgctgacaactttgtgcctaataatcctcgttcttctg
acgaccgaagttcaagccggtggaaagaagtacaaccagccatgcggagggagggactgc
agcggagggtgcaagtgcttccctgagaagggcgcccggggacagccaggccccctagga
ccacagggaggccagggatccccaggacgaccgggtgagcctggtgtgatcgggcccaag
ggagagaagggggaccgtggacgtggcggcatcaccgggccaaaaggatccgtgggaatg
accggagttcctgggttttctgggatggacgggattcccggtcaccctggacaggcagga
tctcgtgggaaaccaggtgctgatggctgcaatggaacacgaggagacgacggaacgcag
ggcagaacaggcctacatggctatgcaggtcatcctggtaaccctggcagaaagggtgag
aaaggtgactctttggaagtcagcgtgttcatggaaagatttcggggagaaaggggtgat
cgtggctttccaggatatacaggccctgctggtttacctggtttgacaggacgtcagggc
catgttgggccacaggggccccctggatttcctggccctccagggccaaagggcacaatg
actaaaacgttgaaggggcagaaaggtgaaccgggcgatgccggagagccaggccccccc
gggaactctactcacccccacaccaagaccccctcagggctaccggggctgaaaggggaa
aagggtttccaaggtgaaaggggagatttggctgacaactgggtgatcggagaagtgggt
gtgatgggatatccagggcaaagggggagccctggtttagatgggcagccaggagagacg
ggagatgctggggaaccagggcaaggtggaagagatggagccaagggtgaaagaggagag
ccaggagaattcattccgatcggtccaattccaccggcgccccctggtcctaatggacag
cccgggccccagggggagaagggggaacctggggagaagggactccctggaaccccagga
acgcctgcctatcctacttccgaaactaggttcaataagggctcatttggcccaaagggg
ttcaaagggagcaagggtcctgacggtgacccagggatacctgccacggtgcctggtccc
cctggttacgatggatatccaggagaccctggggccccaggagagaggggatcttgggga
aacgagttcagaggtccgaaaggtgaaatagggcagccaggtgctggtggacagcagggt
cagaaaggtgatgaaggcctgtgccagtgcgacaatgtgaactccccacctggccctcct
ggacctccaggtagcccgggaatccaaggcatgtcgggcgagtggggccagcaaggcgac
ccaggcagtcctggcccacgcggggctcctggactgcctggtctccaaggccaggagggt
ctaccaggtccaaaggggagtaaaggaagaccaatgaaagccactcagaaaggatttcct
ggagatccaggggacccaggtacaacaggaaaccagggtgaaagtggtcaacctgggcct
ataggatctcctggagcccctggactgcgtggtcgacctggtgaaggtccagtgggacct
cctggagaaaagggtggtcctggccgcccgggggcacctgggagagctggactgatgggc
gaaccaggtgtggtccttggagcaaaaggacttccaggtctcccgggagacgctggctac
gacggttttgatggaagccctggacccccaggtgttcaaggaggctgtgttctggaagga
aacaggaggcgggaggatggaacaggagagtgtgatccagtgccagggcctgctggtaaa
cctgggctacctggccctatcggtttggatggttcacaaggcacacctggacccaaaggt
tttcaaggactgtttggggaggaggggctcaaaggagaacagggtgatccaggcagaggt
ggaccaatggggcatccagggtttgtggggcctcgtggagataggggttcacccggcagc
aagggaaggcaggggtctcctggggacctgggaaggcggggcctggatggagaaccggga
cagaaaggcaaccacggggaggttgtgggggcttccacaggaccttccggagagccaggg
ccccctggcctacaaggggctaaaggcaacattggagaccctggccagcctggataccca
gggatggagggcatgccaggaatccttggctccaaaggagaactgggtcctccaggcctg
caaggggaagaagggaggccagggccgccaggaaagtatggcttccggggattcccagga
cagacaggccccccaggttctccagggtccattggagaaccaggccccgctggtgacaga
ggagatgacggtgatcctggcccaccaggcccttttggaaggaagggaatacctggtgag
ccaggtagcgttggtccaaagggaaacgaggggcagcagggtaacccagggttaccagga
cgacctggccacgctggtcttcctggagtcaaaggttccagaggctcaacagggatgaca
gggtttgaaggcatgccaggtgtcaagggaaaactaggatttgcaggacagaaaggagaa
caggggttttctggaaccccaggttacaaaggtgccatgggaaagaagggagtaaagggt
gacagagggctgcagggccctcctggtgaaaagccatacattcccccatacatgatgaaa
gagatgaaggggaccaagggcgaccatgggaaattaggagattatggcttcgtaggtccc
agggggtctaagggatacccaggcctgccaggagggactggtactgatggtatgccggga
gagcccagcgatgagaagggtgccaagggaaactttggggcagaagggcttccagggcac
aaaggaatgcccggcctccctggacaaccgggaatccagggctttccgggaatgactggc
cacaggggagagaaaggaacacctggagcttacggccgctcaggggaagacggtgtgaag
ggacgcaaaggtgaaggcggccccatcatcaacttacctggacccacaggtgaaaggggg
aaccctggctttcctggacagttgggggtcaagggcttcaatgggctgctgggagagagg
ggcagctcaggcttcaatggcattgatggtctgaaaggagagaagggtcagcctggtact
gaaggcccggcagggtctgatgggaaaaatggttccccaggacaccatggccacaagggg
tggcctgggaccccaggagagccagggtttgggggtcatcctggcctcccagggcagaga
ggttttcctggtctgaagggcatatttggtctggacggtctaaaggggcagaaaggcatc
ccaggagtcccaggttcggataacggaggactggcaggagaccctgggactaaaggggag
aaaggagaagcagggatccccaacacagagagaggattaccagggctgttgggttccaag
ggatctcgcggagactcaggtgatcaaggtgaacctggaccccctggatttcagggcccc
cctgggatacacgggatatctgacatacaaggcgcacagggtgaccccggtttcccaggg
gcaaaagggcatcaaggttttcctgggtttcaagggagaccaggtgtaccctcaaccagc
ggaagcaagggggatagaggacagccaggaccttttggggagaggggctcaataggtacc
caaggagatcagggacagcaaggattcccagggcggaacggactgtctgggaataaaggt
gcaacgggagagcaggggctgatgggaactcctggaaggcctggtttcaaaggagacaaa
ggacctgtcggtccaaaaggcaacactggatttccaggattccccggggtgcctggtgat
cagggcccagtacccaccccacctaaacagcctggggagaggggcccgcctggtgctcat
ggaatccgtggacccgaaggacatcgtggggagtttggcccccaagggccgcctggagac
ccaggcttcatgggtccccagggacagaagggcatgccaggagtcagtggcacacctgga
acaccaggttaccgtggagatgtcgggcagggtgggcaccaaggtctccagggccttcaa
gggagtccgggccgccccggtgcccctgggatcactggaatgccggggcgcagtgtgagc
gtggggtacctgctggtgaagcacagccagtcggaccaaacgcccatgtgtcccgtgggc
atggccaagctgtgggatgggtacagtctgctgtactttgagggtcaggagaaggctcac
aatcaggacctgggcctggctgggtcttgtcttcctcgtttcaataccatgcccttcctc
tactgcaaccccggggacatttgctactatgccagtcgcaatgacaaatcctattggctg
tccaccactgcccccattcccatgatgccagtggaggagacggagatcagaccctacatc
agccgctgctccgtatgcgaggcgccatccgtggctattgcagtgcacagtcaggacact
acaatcccacaatgccctgcgggctggcgcagcttgtggattggctactctttcctcatg
cacacggctgccggagacgagggcggcgggcagtccctggtgtcacccggctcctgcttg
gaggacttccgcaccacgcccttcatcgagtgcaacggggccaaaggggcctgccactac
tttgccaataagcagagcttctggctcacttccatcgagcactccttccagagccggcca
gccgcagagacgctcaaggctggccagcagctgtcccgaatcagccgctgccaagtgtgc
atgaagaacctgtga
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