Anguilla rostrata (American eel): 135250802
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Entry
135250802 CDS
T10705
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135250802 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arot04131
]
135250802 (vps8)
Membrane trafficking [BR:
arot04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135250802 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Clathrin
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_11
Beta-prop_WDR5
zf-RING_2
Beta-prop_EML_2
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR3_1st
WDR55
zf-C3HC4
EIF3I
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
135250802
NCBI-ProteinID:
XP_064183602
LinkDB
All DBs
Position
3:complement(39436636..39537792)
Genome browser
AA seq
1405 aa
AA seq
DB search
MSESPDTRSLVSASSQLNLMDIDAIDDKEFDIPQVDTPPTLESILNEPEDEEEPFVLEDT
YLLNTENMDAHSCETSSLASSDSGDRTHLKRRRRPVESTATVHGSVLRHSTLKGISAQIV
SAADKVDAGLPTAITVSSVIAVGTSHGLALVFDPSQALRLCLGSTAVGAQYGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITEAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELSFRRVMGVRSCDTRCLFSGSKGEVCCVEPLHSSPELKDHPITQYSLLAMASLTKILV
IGLKPSLKVWMTFPYGKTDPASVPQLAWQFVAVHKAVNPMLAFCRGDAVHFLLVKKEESG
AIHVIKQRQLHLNCDIISLTWINSRTLVLMDSGEKLHVVDRASQEELESLDMAEVQLVYN
SSHFKSLATGGNVSQALALVGEKACYQSVCSYGGQIVYLGTKSVHIMTLRNWRERVDCLL
KQERFVEALSLAWSFHEGTAKAVVGLFGDPAKRKGVVADKMVEILFQYADRSLKKCPEQG
KIQVMEQHFQDMVPVMVDYCLLLQRTDLLFNQIYGRLVENSVARGVFLESLEPYILSERL
GCLTAPVMRDLLGHFQDNGMMDSVENCLVHMDITSLDIQQVLQMCWENQLYDAMIYVFNS
GMNDYISPMERLFQVIGPPLQEGKSLTDEQVVMGNKLLVYISCSLAGRAYPLGDIPEDLV
PQVKNQVFEFLIRLHSVETSQEEEVYPYVRTLLHFDTREFLNVLALTFEDFQNDKQALEY
QQRIVDILLTVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDD
DSRHTERQQVLLELLQVGGIVQFDESRLLHLAEKAEFYQICEFMYEKKHLYDKIIPCYLK
DPLRKEEIFNYVHNILSIPGYGPEEKRSVWEEALEHMQELVAIDPAKAADLVSVHFSEEV
RPIVDKLEDDSLVFQFIKCLLDPREGPNPQAVLRLSPDLHELHVGLLCRFSPRQVVDFLK
VSQDYRLEETIQITEQYSLHEATAYLLEKKGDVHGAFQVLLQTLKDKLVILTQESQTNTE
EEEEEEEQVPLQRVEAALGDIISLCHRSSHSLNQQQREALWFPLLEAMMSPQKLLKGPTW
RHTSEALKELTMQVLNSMTSFIALPAIIQRILQDPVYGKGKLAEIQGLILGMLDTFNYEQ
TLLETTTNLLNHDLHWSLSHLRAVVSRGLHPRQDHCSICLQQYKRRQEAQDEIIIFSCGH
LYHCQCLQSKECGVAGERLHGWSCYKCMSGQGGRGGERNAASGGRSRSTSLAQTKVTSAH
RGSWGDATGRKMFKDATLDAQQSQSWEQLRCMYRGPSRLAIFSELSHSRGNEKSSLLNPS
QPSSGSIFHSENFQLKLSPPPLIEE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcgccagatacgcgcagtttggtttctgcgtcttcccagctgaatttaatg
gacatagacgcgattgatgacaaagagtttgatatccctcaagtggacactcctcccacg
ttggaaagcattctgaatgagccggaggatgaggaggagccttttgtcctggaagacacg
tacctgctcaacacggagaacatggacgcccactcctgcgagacgtcctccttggccagc
tccgacagtggcgaccgcacgcacctgaagaggaggaggaggccggtggagagcactgcc
accgtacacggctcggtactccggcacagcaccctgaaaggcatctctgcccaaatcgtc
tctgctgctgacaaagttgatgccgggttgcccacagcaataacagtgtccagtgtgatt
gcggttgggacgtcacatgggctggccctggtgtttgaccccagccaggcgctgcggctg
tgtctgggcagcacggcggtgggggcgcaatacggcgcggtgtcagctctcagcatcaat
cacgactgctctcgcctgctctgcggcttcgctaaaggacagatcaccatgtgggatctg
gccaatgggaagcttttaaggaccatcacggaggcccacccccccggtactgccatcctg
cacgtcaagttcacagatgacccaacgcttgctgtctgtaatgacagcggcgggtcggtg
ttcgagctgtccttcaggagggttatgggtgtgcggtcgtgcgatacccgctgtctcttt
agcggctcgaagggggaggtgtgctgcgtggagcccctgcactccagcccagagctgaag
gaccaccccatcactcagtactccctgctggccatggcttccctcaccaagattttagtg
atcgggttgaaaccgtctctcaaagtgtggatgacgtttccttatggcaagactgatcca
gccagcgttccacagcttgcttggcagtttgtggcggtgcataaagctgtgaatcccatg
ctggccttctgcagaggggacgctgttcacttcctgttggtaaagaaggaggagtcgggt
gctatccatgtcatcaaacagagacagctgcacctcaactgtgacatcatcagcctgacc
tggataaactcgcggaccctggttctgatggacagtggggagaagctccatgtcgtggac
cgggccagtcaggaggagctggagagcctggacatggcggaggtgcagctggtctacaac
agcagccacttcaagtctttggccaccgggggcaatgtcagccaggccctggcattagtt
ggggagaaggcgtgctaccagtctgtctgcagctatggaggtcagattgtctatttggga
actaagtctgtccacataatgacactaagaaactggcgagagagggtggattgcctgttg
aagcaggagagatttgtggaggcgctgtctctagcctggtcttttcatgagggcactgca
aaggctgtggttgggctgtttggagaccctgctaagaggaaaggagtggtggctgacaag
atggtggagattctgtttcagtatgccgaccgttctctgaagaagtgccctgagcagggg
aagatccaagtgatggagcagcacttccaggacatggttcctgtcatggtggattactgt
ttgctgctgcagaggacggacctgctcttcaatcagatttatgggcgtctggtggagaac
tcggtcgcccggggggtgttcctggagagcctggagccctacatcctgagcgagcgtctc
ggctgcttgaccgcgcccgtcatgcgggacctgctcggtcacttccaggacaacggcatg
atggacagcgtggagaactgcctggtccacatggacatcaccagcctggacatacagcag
gtgctgcagatgtgttgggagaaccagctctatgatgccatgatctacgtcttcaacagc
gggatgaacgattacatcagccctatggagagattgttccaggtgattgggccaccgttg
caagagggaaagtctctgacagatgaacaggtggttatgggtaataagctgcttgtgtat
atcagctgttctttggctggacgagcctaccctctgggggatattccagaagaccttgtt
cctcaggtgaagaaccaggtgtttgagttcctgatccgtctgcactctgtggagacttcc
caggaagaggaagtgtacccctatgtccgcacattgctgcactttgacacccgggagttc
ctcaacgtcctggccctgacctttgaggacttccagaatgacaagcaggccttggagtac
cagcagcggattgtggatattttattaacggtgatggtggagaactcagacttcaccccc
tcccaggtgggctgtctcttcacatttctggcccggcagctggccaagcctgacaacacc
ctctttgtcaacaggaagctcttcgaccaggtcctggagttcctctgtagcccagatgat
gactccagacacacagagaggcaacaggtgttgctggaacttcttcaggtggggggcatt
gtccaatttgatgagagccgactcctccacctggctgagaaggccgagttctaccagatc
tgtgagttcatgtatgagaagaaacacctgtatgacaaaatcatcccctgctacctgaag
gatccactcagaaaggaggagatattcaactacgtccacaacatcctgtccatcccgggc
tacgggccagaggagaagcggtccgtctgggaggaagctctggagcacatgcaggagctg
gtggccattgaccctgccaaagcagcagacctggtctctgtgcacttctctgaggaggtg
cgccctatcgttgacaagctggaggatgattccttggtgttccagtttataaagtgtcta
ctagacccaagggaaggccctaatccccaggccgtcctgagactcagccccgacctccat
gagctccacgtgggactgctgtgccgcttcagcccccgccaggtcgtcgacttcctgaag
gtctctcaggactacagacttgaagagaccatccagatcacagagcagtacagcctccat
gaggccacggcctacctgctggagaagaagggagacgtccatggagctttccaagttctg
ctgcagacgctgaaggacaaactcgtcatcctcacccaagagagtcaaactaacacagag
gaggaggaggaggaggaggagcaggttccactgcagagggtggaggcggcgctgggtgac
atcatctctctgtgtcacaggagctctcatagcctcaaccagcagcagagagaggccctc
tggtttcctcttcttgaggcgatgatgtcaccacagaagctcctgaaggggccaacctgg
cgccacacgtcagaagccctgaaggagctgaccatgcaggtcctcaacagcatgacgagc
ttcatcgccctgcccgccatcatccagcgcattctgcaggacccagtatatgggaaaggc
aagctggctgaaatccagggactgattctgggcatgctggacacctttaattatgaacag
acgctgctggagaccaccaccaacctgctcaaccacgacctgcactggtccctgtcgcac
ctgcgggcggtggtgagtcgcggtctgcacccccggcaggaccactgcagcatctgtctg
cagcagtacaagcgtcggcaggaggcccaggacgagatcatcatcttcagctgcgggcac
ctctaccactgccagtgcctgcagagtaaggagtgcggggtagcgggggagaggctgcac
ggctggagctgctacaagtgcatgtccggccagggcgggcgtggcggagagaggaacgcc
gcgagcggcgggcggagccgcagcacgtccctcgcgcagaccaaagtcacttctgctcat
cgaggttcctggggtgacgctactgggagaaagatgtttaaggatgccacattggacgcc
cagcagagccagtcctgggagcagctgagatgtatgtacagaggtccctccaggttggcg
atcttcagcgaattgtcccattctcgtggcaacgagaagtccagcctcctgaacccctca
cagcccagctccgggagcattttccacagcgaaaacttccagctcaaactctcccctcct
ccgctgattgaggagtag
DBGET
integrated database retrieval system
