Anguilla rostrata (American eel): 135251118
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Entry
135251118 CDS
T10705
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135251118 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arot01009
]
135251118 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arot04515
]
135251118 (pcdh20)
Protein phosphatases and associated proteins [BR:
arot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135251118 (pcdh20)
Cell adhesion molecules [BR:
arot04515
]
Cadherins
Protocadherins
135251118 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
135251118
NCBI-ProteinID:
XP_064184261
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All DBs
Position
3:53500928..53507229
Genome browser
AA seq
866 aa
AA seq
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MGTCAVRKDTGICVNMSRSTSLQKVLGLVLLQQMLCSSVEIHLSVQEEQPEGIKIGRIAQ
DFPPPYNFLTSNKHMRLDTKTGDLYTTMHTIDREMCPQLPTTTGACLIQHLAVAGPDEEV
IKVTVEVEDINDNSPHFPVEEVRLSMPEDVAVGTSFLLDDQAQDDDAGSNGELWYRLDDP
DGFFSAKEAGPLLVVVVRRPLDREARDTHLLTVVATDRGVPSRSSTAILVVEVTDINDNC
PAFRPDSPKSAFVRMDAPRGTAVTRVRAVDPDLGPNSVIIYSFSPKTSDKSRELFSLDSH
SGQITLAGAIDSNGPAEYTLRILATGQSCPPVVTQVTVSILPAASQRPVMKIRYIAEHRE
GTILIEENQPPTVLALLELEDASPVKGAPSIAGEVPFFLRPQTGNYLLLTSKPLDFEQIC
KYHVSIRVEDSRLPGGREEMVITVIVLDVNDNAPQFQQPHYQVEVEENNAPGTTLVHIRA
TDLDSLLNGKVTYRLGPHTAAMFSIEPVTGRVSVAVTLDREHQEFHNFTVLARDNGSPAL
ESTTSVSVRVLDQNDNEPVFANTDFIFFIPENFPRLGQVGVVGVRDPDAGGNGKVEVQVL
NGSSPFMMDNARGTLRCVAEIDREMQDRYELWLLAHDGGDPSLSSTARVTIFVEDVNDNR
PQVILPSSNLSCLTVSPTTLTGATVTKIYAIDEDSGINADISYRMVASEPHRSSPFLIDA
RSGNVTLAQQLLLSDHGLHHLFIVVSDGGEPIPLLSSVWVNLLVNETQEPCTLSTVPMPV
PFHFTHLPSQKTICEGDPSDVKYAQNILLVGLGMLVCSAIMLLGTVILFIKQRTLRKSHQ
KHVSKGCEIPLKLKETYSTVDWTDVQ
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggaacatgtgctgtgagaaaggacacggggatatgtgttaatatgagcaggagcact
tcactgcagaaggttctgggcctggttctgcttcagcagatgctgtgcagcagtgtagag
atccacctatctgtccaggaggagcagccagagggcatcaaaattggaagaattgcccaa
gactttcctccaccatataatttcctgacttccaataagcacatgaggctggacacaaaa
acaggggacctgtacactactatgcacaccattgaccgggagatgtgcccacaactgcca
accacaacaggggcgtgtctgatccagcaccttgcagtggccggcccagatgaggaggtc
atcaaggtcaccgtggaggtagaggacatcaacgataactcgcctcactttccggtggaa
gaggttcgcctcagcatgccagaggatgttgctgtggggaccagtttccttctggatgac
caggctcaggatgatgacgcaggcagtaatggagagttgtggtaccgcttggacgaccct
gacgggttcttcagcgcaaaagaggcaggcccattgctggtggtggtggtaagacggcca
ttggaccgggaggcccgggacacccatctcctgaccgtggtcgcgactgatcgcggggtc
ccgtcgcggagcagcacggccattttggttgtggaagtgactgacatcaatgataactgt
ccagcattccgccctgacagccccaagtccgcctttgtccggatggatgcgcctaggggc
acggcagtaacccgtgtcagggccgtggaccccgacctcggccccaacagtgtgatcata
tactccttcagtcccaagacttctgacaagtccagagagctgttttccctggacagccac
agtgggcagattaccctggctggcgctattgatagcaatggccccgctgagtatacgctg
cgaatcctggccaccggccaatcctgcccccctgttgtgacacaggtaacagtatccata
ctcccggcagccagccagaggccggtgatgaagatcaggtacatagcagagcatcgagaa
gggactatactgatagaggagaaccagccccccacagtcctggccctcctggagctggaa
gacgcgtcccctgtgaaaggcgccccatccattgcgggggaggtgcctttttttctgaga
ccacaaactggcaactacctcctgctaacatcgaagcccctagactttgaacagatatgc
aaatatcatgtttccattcgagttgaagacagccggctccctggggggcgtgaggagatg
gtgatcacagtcatagtgttggacgtcaatgacaatgccccgcagttccagcagccccat
tatcaggtggaagtggaggagaacaatgcacctgggacgaccctagtgcacatcagagct
accgatctggacagcttgctgaatggcaaagtgacttacagactaggccctcatacagca
gccatgtttagcatcgagcctgttactggccgtgtgtcagtggcagtcactctggacaga
gagcatcaggagtttcacaatttcactgtgctggccagggacaatggctctcctgctctg
gaatctaccaccagtgtgtccgttcgcgtgctggaccagaatgacaacgagcctgtcttc
gccaacacagacttcatcttcttcatcccagagaacttccctcgccttggccaggttgga
gtggtgggtgtcagggacccagacgctgggggcaacgggaaagtggaggtccaggtgctg
aatggcagcagtcccttcatgatggacaatgcccgggggaccctgcgctgcgtggccgag
attgaccgtgagatgcaggaccgctatgagctgtggctcctggctcacgatggtggtgac
ccctcactctcctctaccgcccgggtcaccatctttgtggaggacgtcaatgacaaccgg
cctcaagtgatcctcccctccagcaacctgtcctgcctgactgtgtcccccaccaccctc
actggggccactgtcaccaagatctacgccatcgacgaagactctgggatcaacgctgac
atcagctaccgcatggtggcctcagagccacaccgcagcagcccgtttctgattgacgca
cgctcggggaacgtcacgcttgcccagcaactgctgctaagcgaccacgggctgcaccac
ctcttcatcgtggtgagtgatggcggagagcccatccccctgttgtcttctgtgtgggtc
aatctcctggtcaatgagacgcaggagccctgcactctgagcactgtgcctatgcctgtg
cccttccatttcacacacctaccctcccaaaagaccatctgtgagggggacccatcggac
gttaaatacgcccaaaacatcctgttagtgggccttggcatgttggtgtgttctgccatt
atgctcctgggaactgttatattgttcataaaacaaagaacactacggaaaagccaccag
aagcatgtttctaaaggttgtgaaatcccactgaaactgaaggagacctacagtactgtc
gattggacagatgtacagtga
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