Anguilla rostrata (American eel): 135251331
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Entry
135251331 CDS
T10705
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03018
RNA degradation
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135251331
09123 Folding, sorting and degradation
03018 RNA degradation
135251331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135251331
03041 Spliceosome [BR:
arot03041
]
135251331
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135251331
mRNA degradation factors
5'-3' decay
Lsm complex
135251331
Spliceosome [BR:
arot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135251331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
135251331
NCBI-ProteinID:
XP_064184745
LinkDB
All DBs
Position
3:58176387..58177796
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLISPHDGMEAIPNPFVQQQEG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagagaagaaaaagaaggaaagtatattcgacctgtcgaagtacatcgat
aagacgattcgagtcaagtttcaagggggtcgagaagcaagtggggttctgaaaggcttt
gatccacttctgaatctggtacttgacggcactattgagtacatgcgagacccagatgac
cagtacaagttaaccgaggacacgaggcagttgggcctggtcgtgtgtcgcgggacgtcc
gtggtgctcatctctccgcacgacggcatggaagccattccgaatccgttcgttcagcag
caagaagggtag
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integrated database retrieval system
