Anguilla rostrata (American eel): 135251411
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Entry
135251411 CDS
T10705
Symbol
polr2a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03020
RNA polymerase
arot03420
Nucleotide excision repair
Brite
Enzymes [BR:
arot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135251411 (polr2a)
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135251411 (polr2a)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135251411 (polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135251411
NCBI-ProteinID:
XP_064184900
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Position
3:complement(59483153..59498595)
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AA seq
1969 aa
AA seq
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MHGPPSGDSACPLRLIKRVQFGIISPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFITKIMKVLRCVCFFCSKLLVDSN
NPKIKDILSKSKGQPRKRLTHVYDLCKGKNICEGGEEMDNKFGVEQAEAEEDITKEKGHG
GCGRYQPCIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDIILGMDPKF
ARPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSIKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIIIFNRQPTLHKMSMMGHKVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDEEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DVTRLFYSNIQTVVNNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGEAVE
FQNMATLKPSNKAFEKKFKFDCTNERALRRTLQEDVVKDVMTNAHVQSALEREFEKMRED
REILRAIFPTGDSKVVLPCNLARMIWNAQKIFRINPRTPTDLNPLRVVDGLQDLSKKLVI
VNGDDPLSRQAQQNATLLFNIHLRSTLCSRRMTEEFRLSTEAFDWLLGEIETKFNQSIVH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVTEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVGLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGSAPSPMSSMSPAMTPWNTGATPAYGAWSPSMGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTXPTYSPTSPTYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEENN
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccctccggcgacagcgcatgcccattgcgcctcatcaagagagtgcaa
ttcggcatcatcagcccagatgagcttaaacggatgtcagtcacagaaggaggtatcaaa
taccctgaaaccacagagggtggccgtcccaaattgggaggtttgatggatcctcgacaa
ggggtcatcgagaggtcaggcaggtgccagacttgtgcaggtaacatgacagaatgtccg
gggcactttggccacattgagctggccaagccggtttttcatgtaggcttcatcaccaaa
atcatgaaggttctgcggtgtgtctgcttcttctgctccaagctgctggttgattcgaat
aacccaaaaatcaaggacatcctgtccaagtcaaagggtcagccacggaagcgactgaca
cacgtgtatgacctatgcaaaggaaaaaacatctgtgaggggggtgaggagatggacaac
aaatttggcgtggagcaggctgaggctgaggaagacattacgaaggagaagggccatggc
ggttgtggacgctatcagccttgtatccgccgctcggggctggagctgtacgcggagtgg
aagcatgtcaacgaggactcccaggaaaagaagattctgctgagccctgagcgcgtgcac
gagatcttcaagcgcatctctgacgaggaggacatcatcctgggcatggaccccaaattt
gcccggcccgagtggatgatcgtcactgtgctgcctgtgcccccgctggctgtccgaccc
gccgtggtcatgcagggctccgcccgtaaccaggatgatttgacacacaagctggcggac
attgtgaagatcaataatcagctgcggcggaatgagcagagcggggcggcggcccacgtc
atcgccgaggacgtgaagctgctgcagttccacgtggccaccatggtggacaatgagctg
cctggcctgcctagggccatgcagaaatcgggccgcccccttaaatctataaaacagcgg
ctgaaggggaaggagggccgtgtcagaggaaacctgatggggaagcgtgtggacttctct
gcccgtaccgtcatcaccccagacccgaacttacagatcgaccaggtcggcgtcccgcgc
tccattgctgccaacatgaccttccctgagatcgtcacccccttcaacattgacagactc
caggagctggtgagaagggggaacagtcaatatccgggagccaaatacatcatccgtgac
aacggtgaccgtattgacctgcgtttccaccctaaacccagcgacctgcacctccagatt
ggctacaaggtggagcggcacatgtgcgatggtgacatcatcatcttcaacagacagccc
acgctgcacaaaatgtctatgatggggcacaaagttcgaatcctgccctggtccaccttc
cgactcaacctcagtgtgaccaccccttacaacgctgactttgacggggacgagatgaac
cttcacctgccgcagtccctggagacgcgagcggagatccaggagctcgccatggtgccc
cgcatgattgtcacgccccagtccaaccggcctgtcatgggtatcgtgcaggatactctc
acggctgtgcgcaagttcaccaagagggacgtctttctggagaggggagaggtgatgaac
ctgctcatgttcctgtccacctgggacgggaaggtcccccagccggccatcctgaagccc
cggccgctctggaccggcaagcagatcttcagcctcatcatccccggccacatcaacgtc
atccgcacgcacagcactcaccccgacgaggaggacagcggcccctacaagcacatttcc
cctggagacacgaaggtgatcgtggagaacggagagctgatcatgggcatcctttgtaag
aagtccttgggtacctccgctggttccctggtccacatatcctacctggagatgggccac
gatgttacccgcctcttttattccaacatccaaactgtcgtcaacaactggctgctcatc
gagggtcactctattggtattggtgactccatcgctgatgccaagacttacttggacatt
cagaacaccatcaagaaagccaaacaggatgtgatagaggtcattgagaaggcccacaat
aatgagctggagcccactcctggtaacaccctgaggcagaccttcgagaaccaggtgaac
cgcatcctgaacgacgcccgtgacaagactggctcctccgcccagaagtccctgtctgag
tacaacaacttcaagtccatggtggtggcggggtccaaaggatccaagatcaacatctcg
caggtcattgctgtggtggggcagcagaacgtggagggtaagcggatccccttcggcttc
aagcaccggacgctgccgcacttcatcaaggacgactacgggcctgagagcaggggcttt
gtggagaactcctacctggccggcctcacgccaaccgagtttttcttccacgccatgggc
gggagagaggggcttatcgacacagctgtgaaaacagctgagactggttacattcagcga
cgtctgatcaagtctatggagtctgtgatggtgaagtatgacgccacagtgcgtaactcc
attaaccaggtggtgcagctgcgctatggagaggacgggctggccggtgaggctgtggag
ttccagaacatggccacgctcaagccctccaacaaggccttcgagaaaaagttcaaattt
gactgcaccaacgagcgagccctgcggcgcaccctgcaggaggacgtggtgaaggacgtg
atgaccaacgcacatgtgcagagcgccctggagcgagagtttgagaagatgagggaggac
cgtgagatcctacgggccatcttccccactggagatagcaaggtggtgctgccttgtaat
cttgccaggatgatttggaacgcacagaagattttccgcatcaatcctcgcactcccaca
gatctgaaccccttgcgtgttgtcgatggcctgcaggacctgagtaagaagctggtgatc
gtgaacggggacgaccccctgagccgacaggcgcagcagaacgccaccctgctcttcaac
atccacctgcgctccaccctctgctcccggcgcatgaccgaggagttccgcctcagcacc
gaggccttcgactggctgctgggggagatcgagaccaagttcaaccagtccattgtacac
cccggggagatggtaggagccctcgccgcccagtccctgggagagccggccacacagatg
accctgaacaccttccactacgccggtgtgtcggccaagaacgtcaccctgggtgtgcct
cgactcaaggagctcatcaacatctccaaaaggcccaagaccccctcgctcactgtcttc
ctgctgggccaggcagcccgtgatgcagagagggccaaggacatcctgtgtcgtctggaa
cacaccactctgcgcaaggtgactgccaacacggccatctactacgaccccaacccccag
agcacggtggtgaccgaagaccaggagtgggtcaacgtgtactacgagatgcccgacttt
gacgtgacgcgcatatctccatggctgctccgcatcgagctggaccgcaaacacatgact
gaccgcaaactgaccatggaacagatcgccgagaagatcaatgcaggctttggagatgat
ctgaactgcatcttcaatgatgacaatgcagagaagctggtactgagaattcgcatcatg
aacagtgatgagaacaagttccaagaggatgaagaggtggtagacaagatggatgacgac
gtgttcctgcgctgcattgagtccaacatgctgactgatatgacgttacagggcattgag
cagatcagcaaggtgtacatgcacctccctcagacggacaacaagaagaagatcatcatc
acggaggacggagagttcaaggccctgcaggagtggatcctggagacggacggcgtgggg
ctcatgagggtcctgagtgagaaggacgtggacccggtcagaaccacctccaacgacatc
gtggagatcttcacggttttgggcattgaagctgtgcgcaaggccctggagagggagctg
taccacgtcatctccttcgacggctcctacgtcaactaccggcacttggccctgctgtgt
gacaccatgacctgccgcggccatctgatggccatcactcgacatggcatcaaccggcag
gacaccgggccacttatgaagtgctccttcgaggagacggtggatgtgctgatggaggct
tcctctcacggggagagcgaccccatgaagggcgtgtctgagaacatcatgctgggtcag
ctggccccggccggcaccggctgcttcgacctgctgctagacgcagaaaagtgcaaatac
ggcatggagatccccaccaacatccctgggatcagtgtggcaggaccaacgggcatgttt
ttcggctctgctcccagtcccatgagcagtatgtctccagccatgaccccctggaacaca
ggagccacgcccgcctacggggcctggtcgcccagcatgggcagcggaatgacccccgga
gcggcgggcttctcgcccagcgccgcgtccgacgccagcggcttctccccggggtactcc
ccagcctggtcgcccacgcccggctcgcctggatccccaggccccgccagcccgtacatc
ccctctccaggtggagcaatgtctcccaactactctccgacctcccctgcctacgagccg
cgttcaccgggaggctacacgccccagagcccgggctactcccccacgtcgccctcttac
tcgcccacgtcgccctcctattcccccaccagccccaactacagccccacctccccgtcc
tattcgcccacctcgcccagctattcgcccacttcgccctcctactcgcccacgtctccc
agctactcccccacctcgccctcctattctcccacgtcgccttcctactcgcccacctcc
ccctcttactctcccacctcccccagctacagccccacctcgcctagttacagccccact
tcacccagctacagccccacttcgccgtcatattctcccacttccccttcctactcgccc
acctcgccgtcctactcgcccacatcccccagttactccccgacctctccttcctactcc
cctacctctccgagctatagccccacctcccccaactacacgcccacctcaccctcttac
tcccccacgtcgccctcttactcccccacctcaccgtcatactctcccacctcgcccaac
tacacccccaccagccccaactactctcccacctctccctcttactctccaacttcgcca
tcctactccccgtccagcccgcggtacacccctcagtcccccacgtacacgcccagctcg
ccctcctacagccccagctcaccctcctactctcccacctcccccaaatacacccccacg
tctccctcttatagccccagctctccagaatacacccccacttccccaaaatactccccc
acttccccaaagtactctccgacgtcacccaagtacagccccacctcgcccacttactct
cccaccaccccgaaatacagccccaccntcccaacctactcccccacctcacccacctat
acaccaaccagccccaagtactccccgacctccccaacctattcacccacttctcccaaa
tactctcccacctctcccacctactcgcccactagccccaagggctccacctacagcccc
acctctccgggctacagccccacatcccccacttacagcctcaccagcccggccattagc
cccgacgacagcgatgaggagaacaactga
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integrated database retrieval system
