KEGG   Anguilla rostrata (American eel): 135251641
Entry
135251641         CDS       T10705                                 
Symbol
vimr2
Name
(RefSeq) type III intermediate filament
  KO
K05640  glial fibrillary acidic protein
Organism
arot  Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:arot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arot04131]
    135251641 (vimr2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:arot04812]
    135251641 (vimr2)
Membrane trafficking [BR:arot04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    135251641 (vimr2)
Cytoskeleton proteins [BR:arot04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     135251641 (vimr2)
SSDB
Motif
Pfam: Filament DivIC HALZ TPR_MLP1_2 KASH_CCD BLOC1_2 DUF1664
Other DBs
NCBI-GeneID: 135251641
NCBI-ProteinID: XP_064185346
LinkDB
Position
3:63230075..63241422
AA seq 383 aa
MAMLRVSSYRRLFEEGRWGRESGAALMCGGQYRASARGRAAGTQWVEPDFEAAQVVNRDA
VSRFGKERALIAALNDRLACLIETARCLEEENQSLEAQILELEERRGGLDASATPAPMPD
CGLQAVVESLQREKEQILCDTEKLQKELEMLQLRHEQAAEQTTLVQLEKEEVAVDVDTLC
NECLALRDQVAIYESELDRLQEEHQTTIESLVEPADGVATVTVEFPTPDVTPAILGIKEY
YCQLEESLQFEFKATSLIPLGDQKDAAMGKVEKGRVADASKVRDVGELKNMIAELQRELA
DLEQRGEDLEVEIEERREVYLEEIADLECCVEEIENAQAELDAQMREQCADYDELLSEKM
ALDIEIAAYRGLVEQEEDRLCFL
NT seq 1152 nt   +upstreamnt  +downstreamnt
atggccatgctgagagtgtcgtcctaccgccggctgttcgaggagggacggtggggccgg
gagagtggcgccgccctaatgtgcggaggacagtaccgcgcctcggccagaggcagagct
gcaggcactcagtgggtggagcctgactttgaggcggctcaggttgtgaacagggacgcc
gtgtctcggtttgggaaggagagggccctgatcgctgccttgaatgatcgactggcttgt
ctcattgagacggctcgatgcctggaggaggagaaccagtccctggaggcccagatcctc
gagctggaggagaggcggggaggcctggacgcctccgccacccctgccccaatgcccgac
tgcggcctgcaggcggtggtggagagcctgcagagggagaaggagcagatcctgtgtgac
acagagaagctgcagaaggagctggagatgctgcagttgcgacacgagcaggccgctgag
cagacaaccctcgtccagctggagaaagaggaggttgccgtggatgtggacacgttgtgc
aacgagtgcctggctctgagggaccaagtggccatctacgagagtgagctggacaggctg
caggaggaacaccagacgaccattgagtcccttgtcgaacccgctgatggtgttgccacg
gtaaccgtggagttcccaacccctgacgttacccccgccatcttgggcatcaaggaatac
tactgccagttggaagaaagtctgcagtttgagtttaaagcaacatctctcatcccactg
ggagaccagaaggatgctgccatgggcaaagtggagaaggggagggtagccgacgcctcc
aaagtgagggatgttggtgagctgaagaacatgattgctgagctgcagagagagctggca
gacctggagcagcgtggggaggacctggaggtggagattgaggagcggagggaggtctac
ctggaggagatcgcagatctggagtgctgtgtggaagagattgagaacgcccaggccgag
ctggatgcccagatgagggagcagtgcgcggactacgacgagctgctcagtgagaagatg
gcgctggacatcgagatcgcggcttacaggggcttggtggaacaggaagaagacaggttg
tgtttcctgtga

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