Anguilla rostrata (American eel): 135251641
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Entry
135251641 CDS
T10705
Symbol
vimr2
Name
(RefSeq) type III intermediate filament
KO
K05640
glial fibrillary acidic protein
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arot04131
]
135251641 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arot04812
]
135251641 (vimr2)
Membrane trafficking [BR:
arot04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
135251641 (vimr2)
Cytoskeleton proteins [BR:
arot04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
135251641 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DivIC
HALZ
TPR_MLP1_2
KASH_CCD
BLOC1_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
135251641
NCBI-ProteinID:
XP_064185346
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All DBs
Position
3:63230075..63241422
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AA seq
383 aa
AA seq
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MAMLRVSSYRRLFEEGRWGRESGAALMCGGQYRASARGRAAGTQWVEPDFEAAQVVNRDA
VSRFGKERALIAALNDRLACLIETARCLEEENQSLEAQILELEERRGGLDASATPAPMPD
CGLQAVVESLQREKEQILCDTEKLQKELEMLQLRHEQAAEQTTLVQLEKEEVAVDVDTLC
NECLALRDQVAIYESELDRLQEEHQTTIESLVEPADGVATVTVEFPTPDVTPAILGIKEY
YCQLEESLQFEFKATSLIPLGDQKDAAMGKVEKGRVADASKVRDVGELKNMIAELQRELA
DLEQRGEDLEVEIEERREVYLEEIADLECCVEEIENAQAELDAQMREQCADYDELLSEKM
ALDIEIAAYRGLVEQEEDRLCFL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgagagtgtcgtcctaccgccggctgttcgaggagggacggtggggccgg
gagagtggcgccgccctaatgtgcggaggacagtaccgcgcctcggccagaggcagagct
gcaggcactcagtgggtggagcctgactttgaggcggctcaggttgtgaacagggacgcc
gtgtctcggtttgggaaggagagggccctgatcgctgccttgaatgatcgactggcttgt
ctcattgagacggctcgatgcctggaggaggagaaccagtccctggaggcccagatcctc
gagctggaggagaggcggggaggcctggacgcctccgccacccctgccccaatgcccgac
tgcggcctgcaggcggtggtggagagcctgcagagggagaaggagcagatcctgtgtgac
acagagaagctgcagaaggagctggagatgctgcagttgcgacacgagcaggccgctgag
cagacaaccctcgtccagctggagaaagaggaggttgccgtggatgtggacacgttgtgc
aacgagtgcctggctctgagggaccaagtggccatctacgagagtgagctggacaggctg
caggaggaacaccagacgaccattgagtcccttgtcgaacccgctgatggtgttgccacg
gtaaccgtggagttcccaacccctgacgttacccccgccatcttgggcatcaaggaatac
tactgccagttggaagaaagtctgcagtttgagtttaaagcaacatctctcatcccactg
ggagaccagaaggatgctgccatgggcaaagtggagaaggggagggtagccgacgcctcc
aaagtgagggatgttggtgagctgaagaacatgattgctgagctgcagagagagctggca
gacctggagcagcgtggggaggacctggaggtggagattgaggagcggagggaggtctac
ctggaggagatcgcagatctggagtgctgtgtggaagagattgagaacgcccaggccgag
ctggatgcccagatgagggagcagtgcgcggactacgacgagctgctcagtgagaagatg
gcgctggacatcgagatcgcggcttacaggggcttggtggaacaggaagaagacaggttg
tgtttcctgtga
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