Anguilla rostrata (American eel): 135252388
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Entry
135252388 CDS
T10705
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arot03000
]
135252388 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
arot03310
]
135252388 (rorca)
Transcription factors [BR:
arot03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135252388 (rorca)
Nuclear receptors [BR:
arot03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135252388 (rorca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135252388
NCBI-ProteinID:
XP_064186453
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Position
4:complement(8097109..8115782)
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AA seq
494 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQELPGALGAVGGVGLSR
DEGCDAGSHGRAYSRGSSAALSDLDDIVALPDGLLFDLPLTPEGAGGDYYCGLELLGGGC
GGGGGGGGDSAGSGSSSSRSSPEQSGLDFGDAAHIKHEYQLLHAPALYVHPLLSAVPDGC
SLLEIERVTQSVVKSHLETSQHGTEDLKRLMWTMYSPEETRSFQSKSAECMWQQCAHHIT
NAIQYVVEYAKRIAGFMDLCQNDQIILLKAGCLDVLLIRMSCAYNPVNDTLLFDGKFAGP
QLFKSLGCDDLVSAVYDLAKSLSRLQLSEEEMALFSAAVLLSPDRPWLTDTQQVQKLQER
VYVALQHCLHRSGAPEEKLAKMVSKLPMMKSICKLHIDKLEFFRLLHPETAYSFPPLYRE
VFGSEIAFPDSTEA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaattgaggtgatcccgtgtaagatctgcggggacaagtcttcaggaatc
cactatggcgtcatcacctgtgaagggtgcaagggcttcttcaggcgcagccagcagaac
aacgccatgtactcctgctcgcgtcagaggaactgcctcatcgaccgcaccaaccgcaac
cggtgccagcactgccggctgcagaagtgcctggcgctgggcatgagccgcgacgcggtg
aaatttggccgcatgtccaaaaagcagcgggacagcctgtacgccgaggtccagaagcac
cagcagtcccaggagctgccgggggcgctgggcgcggtgggcggggtgggcctgtcccgg
gacgaggggtgcgacgcgggcagccacggccgggcctacagccggggctccagcgcggcg
ctgagcgacctggacgacatcgtggcgctgccggacgggctgctcttcgacctgccgctc
acgccggagggcgccggcggcgactactactgcggcctggagctgctgggggggggctgc
ggcggcggcggcggcggcgggggggacagcgcgggcagcgggtcgtcctcgtcccggagc
tcgccggagcagagcggcctggacttcggcgacgcggcgcacatcaagcacgagtaccag
ctgctgcacgcgcccgcgctctacgtccacccgctcctcagcgccgtgcccgacggctgc
tcgctgctggaaatagagcgcgtcacgcagagcgtggtgaagtcccacctggagacgagt
cagcacggcacggaggacctgaagaggctcatgtggaccatgtactcccccgaggagacc
cgctccttccagagcaagtctgcggagtgcatgtggcagcagtgcgcccatcacatcacc
aacgccatccagtacgtggtggagtacgccaagaggatcgccggcttcatggacctctgc
cagaacgaccagatcatcctcctgaaagcaggctgtctggacgtcctgctgattcgcatg
tcgtgcgcctacaaccccgtcaacgacacgctgctgttcgacggcaagttcgccgggccc
cagctcttcaaatctctcggttgtgatgacctcgtgagcgcggtgtacgacctggccaag
agcctgagccgcctgcagctgtctgaagaggagatggcgctgttcagcgcggccgtcctg
ctttccccagaccggccatggctgactgacactcagcaggtccagaagcttcaggagagg
gtctacgttgcattacagcactgtctccacaggagcggcgcccctgaggagaaactggcc
aagatggtgtccaagctgcccatgatgaagtccatctgcaagctgcacatcgacaagctg
gagtttttccgcctgctgcaccctgagacggcctacagcttcccccctctgtacagagag
gtgttcggcagcgaaatcgccttcccggactccaccgaggcctaa
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