Anguilla rostrata (American eel): 135253061
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Entry
135253061 CDS
T10705
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135253061 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135253061 (prpf38a)
Spliceosome [BR:
arot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135253061 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
135253061 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
135253061
NCBI-ProteinID:
XP_064187919
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All DBs
Position
4:complement(26590141..26594764)
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AA seq
308 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGATYMRLTGSSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERVCDVILPRLQKRQVLEEAELLDSR
ISALEEDLDEVETSEDEDEEEEKPERGPSPEPHRRGYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPERSKKSH
KKSRRGNE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgaactgtgaaggatgctaatagcatacacgggacaaacccacagtattta
gttgagaaaattatacgaacacgcatatacgagtcaaaatactggaaagaagagtgtttc
ggactgacggctgagctggttgtggacaaagcaatggaattgaagtatgttggtggagtt
tatggagggaatatcaaacccacgccgttcctttgcctgactctgaagatgctacagatc
cagcctgaaaaggatatcatcgtggagttcattaaaaacgaggatttcaagtatgtccgt
ctgcttggagccacgtacatgagactgactggctcttcagtggactgctacaaatacctt
gagccactttacaatgattacagaaaaatcaaaagccagaacagaaatggagaatttgaa
ctcatgcatgtggatgagttcatagatgagttgctacatgcagagagagtatgtgatgtt
atcctgcccaggttacagaaaaggcaggtcttagaagaggcagagcttctggactctcgt
ataagtgctctggaagaagacttggatgaggttgaaaccagtgaagacgaggatgaagaa
gaggagaagccagagagaggaccatctccagagccacaccgacggggttaccgtgacaat
gaccggccgcgccgctccccctcaccacgctacagacgcagtcgttcaccaaggaggagg
agcaggtcaccaaaaagacgcagtccctccccaagacgggaacgccaccgcagcaagagc
ccccgcaggcaccgcagcaggtccagagataggcgccaccgctccaagtccccaggtcac
cacagaagccaccggcatcgcagtcattccaagtccccagaaagatcaaagaagagtcac
aagaagagccgaagaggaaatgaataa
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