Anguilla rostrata (American eel): 135253239
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Entry
135253239 CDS
T10705
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arot04040
]
135253239 (trpc1)
Ion channels [BR:
arot04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135253239 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
PKD_channel
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
135253239
NCBI-ProteinID:
XP_064188359
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Position
4:complement(32216304..32231103)
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AA seq
796 aa
AA seq
DB search
MHINVLPYSLSVVMAALYQSTDTSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKKHGELNVNCVDVLGRDAVTIAIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRASKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSS
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNDEHMDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKILTVLTVAMLWP
LLSVCYLLVPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPPLEM
IDYLLVLWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFKN
VEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLISFTIGLTQLYGKDQRDPAKSVGKDCEGIFCQQQSNDAFQTFMGTCYALFWY
IFSLAHVTLFVTRISYNEEVRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVTSLSKWICSHTSTGKVKRQNSL
REWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaatgtgttgccgtactcgctgtctgtcgtaatggccgctctttatcagagc
acggacacctcctctccagacaaatatctggcgctcaaagacgttagagaggtgaaagaa
gagacgacactggacgaaaagctgtttttgctggcatgcgagaaaggtgactactatatg
gtgaaaaagctgctggaagagaagaaacatggtgagctgaacgttaactgtgtagatgtg
ctgggacgtgatgctgtcaccattgccatagagaatgagaacctggacatcctgcagctt
ctgctggaacatggctgccaggcaacagatgccctgttagtggccatagactccgaggtg
gtgggagctgttgacatcctgctaaaccatcgcccacggagggcctccaagccctctatt
gcgaaactgatgcagcgcatccagaacccggagtactccaccaccatggatgtggccccg
gtcatcctggcagcccaccggaacaactatgagatcctgaccatgctcctgaagcaggac
atctctctgccccggccacacgccgtggggtgcgaatgcaccctctgcaatgccaagaac
aagaaggacagcctgcgccactccagatttcgcctggatatctaccgctgcctggccagc
ccgtccctgatcatgctgactgaggaagaccccattttgcgggcatttgagctgagttct
gacctgaaggagctcagcctagtggaagtggaattcaggaatgactacgaggagttggcc
aagcagtgtaaaatgtttgccaaagacctcctggctcaggcgcgcaactcacgggaattg
gaggtcatcctcaaccacacttccaatgatgaacacatggacaagaggggcctgctggag
gagcgtatgaacctcagccgtctcaaactggccatcaagtacaaccagaaagagtttgta
gcccagtccaactgccagcagttcctcaacaccgtgtggttcggcgagacggcgagctac
aggcgaaagcacacatgcctgaagatcctgacggtgctgaccgtggcaatgctatggccg
ctcctgtccgtttgctacctgctggtgccccgctcccgtgtgggacaggtcatccacaca
cccttcgtcaagttcatcatccacagcgcctcctacttcaccttccttctgctgctcaac
ctctactcgctggtgtacaacgagggcaagaagaacaccatgggcccgcccctggagatg
atcgactacctgctcgtcctctggattatcggaatggtgtggtcggacgtgaagcggctc
tggtacgaggggctggaggacttcctggaggagtcacgcaaccagctgagcttcgtcatg
aactccctctacctggccacgtttgcactcaaagtggtggcgcatagcaagttcaaaaac
gtggaggacacagagaggaagaactgggacgcgttccaccccatcctggtggcagagggg
ctgtttgcctttgccaacgttctgagttacctgcgtctcttcttcatgtacaccaccagc
tcaatcctggggcccttacagatatcaatgggtcaaatgctacaggagtttggaaagttc
cttggtctctttctgctggttctcatctcttttaccatcgggctgactcagctctacgga
aaagaccagagggaccctgccaagagtgtgggcaaagactgcgagggcattttctgccag
caacagagcaatgacgccttccaaacgttcatgggcacctgctatgccctgttctggtac
atcttctcgctggcccacgtgaccctgttcgtcaccagaatctcctacaatgaggaggtg
cgctcttttgtgggtgccctcatcgtgggaacctacaacattgtagtagtcatcgtcctc
accaagcttctagtggcgatgctacacaagagcttccgacagattgctaaccatgaggac
aaggagtggaagtttgccagggctaagctttggcttagctattttgatgacaagtgcacc
ctgccgcctcccttcaacattctcccttcccccaagaccgtctgctacctggtgaccagc
ctgagcaagtggatctgctcacacacctccactggcaaggtcaagagacagaacagtctg
agggaatggaggaacctgaaacagaagcgtgatgagaactatcagaaaatcatgtgttgc
ctggtccatcggtacctaacctccacccgccagaagatgcagagcacagaccaggccact
gtggagaacctcaacgatctccgtcaggacctctccaaattccgcaatgagatgagggac
ttgctgggtttccgtacttccaagtacgccatgttttatcccaggagttag
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