Anguilla rostrata (American eel): 135253592
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Entry
135253592 CDS
T10705
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arot04040
]
135253592 (trpa1b)
Ion channels [BR:
arot04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135253592 (trpa1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
135253592
NCBI-ProteinID:
XP_064189153
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Position
4:complement(51083777..51103341)
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AA seq
1102 aa
AA seq
DB search
MITQNSCYECVIEDDDTTQASQNVLDWARQDNVDLLENLLYKHPEYLRIRDRSNAGALHH
AASGGGLRVMRMVVIMAGAEELSAADDEGNTPLHWAVQRNNRESCVALLELGADPNVLNR
AVLSPLHLAVCLGHNGLVTLLLSHSTTNANLEGDLGNTPVMMACSSDNCEALCTLLDHGA
KMCHQNKLGHFPIHAAAFAGAKKAMECILSKGEEYGHSVEVHINYLDKSKSSPLHLAVRG
GNIETIKFCISKGARIEQKQCDKSTPLHFACTQGAIEVVKLMISAYNRVEDIINITDGAN
QTPLHKATIFDHVELVEYLISQGADINHIDCKGHTPLLLATSCGAWRSVEALLSRGANIQ
IKDKAGRNFLHLAVLQPKGLKNLPENVLELDSVRELLSDEDWDGCTPLHYACRMGIAASV
QNMLGLKVSPGRKSKDKKSALHFAAQFGRINTCERLLESMSVSKLLNEGDENGMTPLHLA
SQGGHTKVVDLLLRKGALYSSDYKGWTSLHHAAAEGYTQTMKILLNANIKLLDKTDEEGN
TALHVAAKEGHTTAVRLLLSRGAEFTLNNNDSSFLHEAVHHGRKGVANAAIESERCNEAV
SAFKPGSTKRCVVMDMIEFLPESFKYLLDLCVKESDQDPNSHEYWIEYDFRYLQAPIIVM
KYAKTNSAVSIQPLAALNAMAQYNRVELLTHPVCKKYLEMKWHAYGSKAHILNLAVYSLG
LLPLSFLIVNMRPSWPTNSTSVYTVDANSDKRGYFNTICMFLVLAMNVYAVGKEILQIVQ
QRSNYFRDISNCLDWLSATFSILFVIPLLLNVDGTLHWQAGAYAVTVSWINFLLYLQRFE
HFGIYVVMFGEIMRTLVSIITIFFFLMLAFALGFHALMIEQEKFGRLDISLMQTFVMMVG
ELNYQENFLNPYLNHSLPFPYLTYFMLVWFILLMPILLMNLLIGLAVGDIAEVQKNATLK
RIAMQIDLHTSLEEKLPYWFIKRVDQSKITEYPNRKCKSKAYFLCFFLGWEEKRTVRTHL
KSDSGLLTPVEYELKNQKCRLKEMASVLEKQYNLLKLIIQKMEIVTEADDQDGPELAQSH
FEGRLAKRSKWIPLVKAVVKKE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgataactcaaaacagctgctatgagtgcgtaatagaggacgatgacacaacccaggcg
tcccaaaacgtgcttgactgggctcgccaggacaatgtggacctgctggagaacctcctg
tacaagcacccggaatacctgcgcatccgggaccgctccaatgcgggcgctctgcaccac
gccgcctcgggcgggggcctccgcgtcatgaggatggtcgtaatcatggccggcgccgag
gagctaagtgccgctgacgacgagggtaacaccccgctccactgggcggtgcagaggaac
aacagagagagctgcgtggccctcttggaactgggagcggaccccaacgtcctgaacaga
gccgtcctctcccctctgcacctggccgtctgtctgggccacaacggcctcgtcactctg
ttattgtcccacagcactacaaacgcaaacctggaaggtgacctggggaatactcctgtg
atgatggcttgctcctctgataactgtgaggcactttgcacactgctagatcatggggca
aagatgtgtcatcagaacaagctggggcattttcccatccatgcagctgcatttgcaggt
gcaaagaaagccatggagtgcatactgagcaagggggaggagtacggtcattcagttgaa
gtgcacattaattacctggacaagtccaaaagcagtcctcttcatctggctgttcgagga
gggaatatagaaacgatcaaattctgcatttcaaaaggggcaagaattgagcaaaaacag
tgcgacaaatccacgcccctccacttcgcttgtactcaaggggccatagaggtcgtcaag
ctgatgatttcagcttacaacagagtggaggacatcatcaatatcactgacggcgctaac
cagaccccacttcacaaggcaacaatatttgatcatgttgaattggttgaatacctcata
tcacagggtgcagacatcaaccacattgactgcaaaggtcacaccccgctgcttcttgct
acaagctgtggagcatggagatccgtggaagctttgttgtcaagaggagcaaatatccag
ataaaggacaaagcaggtcgcaacttcctccacctcgctgttttgcagccaaaaggtctg
aaaaatcttccagagaatgttctagagctcgacagcgtccgggagctcctgagcgacgag
gactgggacggctgcaccccgctccactacgcctgcagaatggggatcgccgcttcggtc
caaaacatgctaggcctcaaagtgtcgccgggccgaaaatccaaggataagaaatctgcc
ctccattttgcagctcaattcggacgcataaacacatgcgaaagactgctggagtcgatg
agtgtctccaagctgctgaatgaaggggatgagaacggcatgaccccgctgcacctagcg
tcccagggcgggcacacaaaagttgtggatctgctgctcaggaaaggagctctatacagc
agtgattataaagggtggacgagtttacaccatgctgcggctgaaggatatactcagacc
atgaaaatcctcttgaatgcgaacataaaattacttgacaaaactgacgaggaagggaac
acagctctgcatgtggctgcaaaagaaggacacacaaccgctgtgagactgctactgagc
agaggagctgaatttacactcaacaacaatgactcatccttcctacacgaagcagtgcat
catgggaggaagggtgtagctaacgctgccattgaaagcgaaagatgtaacgaagccgta
tcggcatttaaacctggctccacaaagcgttgtgttgttatggacatgattgagtttctc
ccagaatcatttaagtatcttttggacctatgcgtgaaagaatcagaccaagatcctaac
agtcatgaatactggattgaatatgatttccggtatcttcaggctccaataatagttatg
aaatatgcaaaaacaaacagtgctgtcagtattcaacctcttgcagcactgaatgcaatg
gcccagtataaccgtgttgagcttttgactcacccagtctgcaaaaaatatttagaaatg
aaatggcatgcttatgggagcaaagctcacatcctgaacctggctgtctactctctgggt
ctgctgcctctgtccttcctcatcgtcaatatgagaccctcctggcccaccaacagcaca
tctgtctacacagtggatgcaaactcagataagcgtgggtattttaacacaatctgcatg
ttcctggtcttggccatgaatgtgtatgcagttggaaaggagattttgcagatagtgcag
cagcgctcaaattacttcagagacatctcgaattgtttggactggctgtctgcgacattt
tccattctcttcgtgatccctctgttgctgaatgtagacggaaccctgcactggcaagcg
ggtgcttacgcagttacagtttcttggattaactttctactctatctgcaaaggtttgag
cactttggaatttacgtggtgatgttcggagagatcatgcggacccttgtcagcatcatt
acgattttcttcttcctgatgctggcatttgcgttgggctttcatgctctcatgattgaa
caggaaaagtttggccgactggacatctcattgatgcagacttttgtcatgatggtcggg
gagttaaattatcaagagaatttccttaatccctacctaaatcattcacttcctttccct
tatttaacatacttcatgttagtttggttcatccttctcatgccaattcttctcatgaac
ttgctgattggtttagccgtcggcgacattgctgaggtgcagaagaatgctactctaaag
aggattgcaatgcagattgaccttcatactagtctggaagagaagctgccgtactggttc
ataaagagggtggaccagtccaagataacagaatacccgaacagaaagtgcaaatcaaag
gcctacttcctctgtttctttctcggctgggaggaaaagagaacggtccgtacccatctg
aagtctgacagtggtctgctgactccagtggaatatgagctgaaaaatcagaagtgcaga
ttaaaggaaatggccagtgtcctggagaagcagtacaatcttttgaagctgatcattcag
aaaatggagatcgttaccgaggcagatgaccaagatggcccggagctggcgcagagccac
tttgaggggagactggccaagaggagcaagtggattccactggtgaaggcggtggtgaaa
aaggaataa
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