Anguilla rostrata (American eel): 135253606
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Entry
135253606 CDS
T10705
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
arot Anguilla rostrata (American eel)
Brite
Cilium and associated proteins [BR:
arot03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135253606 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135253606
NCBI-ProteinID:
XP_064189189
LinkDB
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Position
4:complement(51616143..51655847)
Genome browser
AA seq
2227 aa
AA seq
DB search
MELSTLIKKTGHRLVEIRVRALQNIKCKLDHGLLSIPDLVQEKMLFVCLLEWFNFPEVPM
QREVLEILNALAEHPTAAQMLRDVGAVEFLTQLSPNVEPQLQAVIDGIFDQLFHLPELLS
NFPGGLSSGQQLTSSHNTGSVLAHFEEESPVMGYFQKSSKTRNFDIPPQRIAVRDSVRCL
KFSTFPWLTLTTTDRHILSSNESSLRSSNHNLVRTTCELLQDVIMQDFPAEIFLQRPSIV
NNLFSLLKLGMNDASYLTLHAVACLLQLCTNLRSRLRFHRDPSFYSAKQDAVSQNSSMSY
SQEIRGTRQSLVSSPEECSPRPSVVGRTGQRARGDGQDGDAASSSGSSSQAGPAPGPPPQ
SPLDAAHLELPETEGEDVLELRLRQLSLAQFSAAVFEHALPLLQTERMKAFLSVLELLSE
ALLLLGDSVSEQVWEDSSLIGQELKEKLQGSMECLGNILCHHHSGSSEQSEAALVHRRMT
YVGTAVFTVRLLQTLLPVEQAAENLPESAGTALFLLCVDAPFGEAFPGIHESAVAYLEQG
NPESHATYRRVAQAARAAESTCTFLKEVHAEGDKNWSELLELADQAIYGLPYHQHLPVVK
ECIQICSYVWKFAQASPLLQAESQKMFLRLLSHPLQAVKAETYTCTLNVVKDCLGVQNVT
KPVSSICSGVNFLLNAHVLYEISTFGLQDQAEKVKCAARDILLFLLQGQLMMTPPTWNKF
IEAACPVIPILQGYAGAEDALGNCILLISEASNERRDGAFSNATRLRAAIRLLFSKHPAV
RGTAAQHLLPHLTSADGLASRPPLERAALEALPSLYVVNKLVDIKLNDSDRSLLKVESVS
KLYSILASETVDLVLRRSAAEQLAVVLQDTAMHAVLKSLGLVEKVTSFIQDCVNSKIKNT
DCLLEPCFSMLRKLVTADPSLRHTLAQRPAFLVTLLRASLIVKEDAGDLSEAAALMCMLM
FDESARMDLWTDSSDARAVPSPFSVPVSVIRRYDLPLQASSHHAVSPYCVVLPPYADLKT
LKPAWEMLQFAWNRAWHSGIDNLLEQLKGYGGDLPEFHADLTMPAAQGALLKVTHVSSGL
RDCLESVRGADSHSAVGCALARLRFYLLTDRLALKLGSDSSKSVLKTLGWRPAIERFLQV
QPACTEDEKLLADIVAFLNAFFKQQKSEADEADVRWILELLLKQERKTLLGLLVRGEAPP
PGDAEEARDLVTQRLQKALSGFFNTLLHRLAHTSDRMSLALAGPFKTQLAAGLLQCLRVS
DAPHFYGLPSLERTLRGMAHVTALPGWSSGAAAPDSLELCVKYLSGLLEVISSFYVEWGG
NSMSFMGKGVTKNAVLCLLHLSYEMMSESKDKDWMSLWSLSHDQSSDEPAASHLGLAWLI
PLWVDRDPEVRFASLGVGSALTAVPSGCLALAASCQNISGGLWATLLSILLDQQECSMVR
REAAFILQNLLVMPMPASMEEAKDCAWQGPCVHDESSGLSLVGLPALQALLYHCQFFEHI
GQAVRSCYQGRYTFDLTFPRAPSLVGSVTEDFDDSLKHWRCPTGPLNQGPESDSQSTSST
LILPEEPGESCAPPLSSSRAPTQQIDSRLVAQGQSDTSDSGSSRDSRAGEGAPEPRAIVT
PHLASAVAGLLANLLAVLPEFTLSALEHGQTLAAFASLVDVGPIERCLGELKTPGLLPGN
EEDAKNQVLSLFQFLSSFSKLFQSCVIQKPELVSRMEFIKPLLASAFTLLTLNIEDIDAG
TRSSALHTWVDALALLAALLRADSAAVLPSVAGALGKHWQPFSGALSLCVRLSSERPALY
SAALRFLAAALSEEAKRRAQEVARFGKPGPATPLSRLLSVSPGAQLCEVLLESFEKQMFQ
DPLKKVSAWALMSLLASSPSAQTHALKAGLIDSSVEQMKHTYTQLHLESLKPGKASQRKK
EESCMRELKMILQILRNCLYNHDECKTAASDSRLAHAVHALWPWLLQDDRAMEAALELLC
VYTANCTAACSSLCWSNAGQGPFPRGPTNSSLMHSVMKLASHVAAENSPVQRLAFSLLSN
LAISRDCKGVLQKSNFLQYFLSIPLPKPGSKSPNPSVSLWLKLLLNMSFGEDGQQTILKI
NGSLELLTEMSQYKHNGNRPAALLILHNICFSSANKPKILASDKSVEVLVSCLESKLPDI
RAVGASALWALLHNNQKAKVTLKCPSVRAKVDEAYASAKKEAEENKDEALNSYLLKCLAK
LAHLLNN
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atggaattgtccactctgataaaaaagacaggccatcgcttggtggaaattagagtgcgg
gcactccagaacataaagtgcaagctggatcatggcttattgtctattcccgatcttgtc
caagagaaaatgttgttcgtttgcttgcttgagtggtttaatttccctgaagtgccaatg
caaagagaagtactggaaattctgaatgctttggccgaacatcccacagctgcacagatg
ctcagggatgtgggtgctgtggagttcttgacccagctttctccgaatgtggagccacag
ttgcaagctgttattgatggcatctttgatcaactgttccacctcccggaactactctca
aatttcccaggtggtttgtcatctggacagcagttgacatcctctcataatacaggttct
gttttagctcactttgaagaagagtcacctgtaatggggtactttcagaaaagctctaag
accaggaactttgacattcctccccaaagaatagcagtcagggattctgtgaggtgcttg
aagttttcaacttttccttggttgactttgaccacaacagatcgacacattttgtcatca
aatgaaagctctctcagaagtagcaaccacaatttagtacggaccacttgtgagctcctg
caagatgtcattatgcaggacttccctgccgaaatattccttcaaaggccaagtatagtt
aataatcttttttccctgctgaagctcgggatgaatgatgccagctacttgactctacac
gcagtcgcctgcctgctgcagctgtgtacaaatctgaggagccgacttcgctttcacaga
gaccccagcttctactcggccaaacaagatgcggtatcccagaattcctcgatgtcctac
tctcaggaaatccgcgggacccgccagtctctggtgtcctccccagaggagtgcagtccc
aggccctcggtggttggacggacggggcagagagccagaggggacggtcaggatggtgac
gccgcctcatccagcggcagcagctcccaggctggccccgcccccgggcctcccccgcag
tccccgctggacgcggcccatctggagctccccgagacggagggcgaggacgtgctggag
ctgcggctccggcagctgagcctggcccagttcagcgccgccgtcttcgagcacgccctg
cctctcctccagacagagagaatgaaggccttcctgagtgtcctggagcttctgtcagag
gctctgctgctcctgggagacagtgtgtcagagcaggtgtgggaggacagcagcctaatt
ggacaggagctgaaagaaaagctgcaggggtccatggaatgtttgggaaacattctgtgc
catcaccactccggctcttccgagcagtcggaggccgcgctggttcaccgcaggatgacg
tacgtgggcaccgccgtcttcaccgtccgcctcctccagaccctgctccccgtggaacag
gctgccgagaatctcccggagagcgcggggacagccctcttcctcctctgcgtggacgcg
cccttcggcgaagccttccccggcatccacgagtcggccgtggcctacctggagcagggc
aaccccgagagccacgccacctaccggcgcgtggcccaggccgcgcgggccgcggagtcc
acctgcaccttcctgaaggaagtgcacgctgagggggacaaaaactggtcagagcttttg
gagctggcagaccaggccatatatggacttccgtatcatcagcacctaccggttgtgaag
gagtgcattcagatctgctcctacgtgtggaagttcgcacaagcaagccctctacttcag
gcagaaagccagaagatgtttttgaggctcttgtcccatcctcttcaggcggtgaaggcc
gagacttacacttgcaccctgaatgttgtgaaggattgcctcggagttcagaatgtcaca
aagccggtttcatccatctgtagcggagtgaactttctcctgaacgcccatgtcctttat
gaaatttctacatttgggctccaggatcaagcagaaaaggtgaaatgtgctgccagggac
attcttctcttccttctgcaagggcaattgatgatgacacctccaacatggaacaaattc
attgaagcagcctgcccagtcatccctatattgcagggctacgcaggagctgaagacgcg
cttggaaactgtatcctgctgataagtgaagcgtcaaatgaaaggagagacggagcgttt
tcgaacgccaccagactgagagcagctatccgtctgctcttctctaagcacccagcggtt
cggggcactgcggcccagcatctcttgccccacctcaccagcgcagacggccttgcttca
cgaccgcctttggaacgtgccgctttggaagcgttgccgtccttatacgtcgtgaacaag
ctggtggacataaaactcaatgactcagacaggtctcttttgaaggtggagtccgtaagc
aagctctacagcatcctcgcctcagagacggttgaccttgttctcaggagatctgcagca
gagcagttggctgttgttttgcaggatacagcaatgcacgcggttttaaagagtttggga
ctggtggagaaggtgacatcttttattcaagattgcgtgaacagcaaaattaagaacaca
gactgcctgttggagccctgcttttcgatgctgaggaagttagtgaccgccgacccttcg
ctgcgccacaccctggctcagcggcccgccttcctggtcacgctgctcagagcctcattg
atagtgaaggaggatgcaggggacttgtcagaggcggccgcgctcatgtgcatgttgatg
ttcgatgaaagcgcaaggatggacttgtggaccgacagttctgatgcccgtgcagttccc
tccccgttctcagtcccggtgtctgtgataaggaggtatgacctgccgcttcaagcctcg
tctcaccacgcggtcagcccgtactgcgtcgttctgcctccgtacgccgacctgaagact
ctgaaaccggcttgggagatgctgcagtttgcctggaaccgagcgtggcattctgggata
gataacctcctagagcaactgaagggctacggaggtgacctcccagagttccacgccgat
ctgacgatgcctgcagcccagggggcgctgttgaaagtaacgcacgtcagcagcgggctg
cgggactgcctggagtccgtccgcggcgccgactcccacagcgccgtcggctgcgcgctg
gcgaggctgcgcttctacctcctgacagaccgtctggccctcaagctgggctccgacagc
tccaagagcgtcctgaagactctggggtggcgacctgccatcgagaggttcctccaagtt
cagcccgcttgcacagaagacgaaaagcttctggcggacattgtggcctttctcaacgcc
tttttcaagcagcagaagtctgaagctgacgaagctgacgtgcggtggatactggagttg
cttcttaaacaggagaggaagactctgctgggcctgctggtgcgcggcgaggctccgccc
ccgggggacgcggaggaagctcgggatctcgtcacccagcggctgcagaaggccctgtca
ggcttcttcaacacgctgctgcaccgtctcgcccacacctccgacaggatgagcctggcc
ttggcggggcctttcaagacgcagctggccgcgggcctgctccagtgcctgcgcgtgtcg
gacgcgccccacttctacggcctgccctcgctggagaggaccctgcgggggatggcccac
gtcaccgccctccccgggtggagctcgggcgccgccgccccggactccctggagctgtgc
gtcaagtacctgagcggcctgctggaggtcatatcctctttctatgtggagtggggaggg
aactccatgtcattcatgggaaaaggagtcacaaagaacgcggtcctctgcttgcttcat
ttatcatatgaaatgatgtcagagagcaaggataaggattggatgtccctgtggtctctg
tcacatgaccagagctctgatgagccagctgcatctcatttgggcctggcatggctcatt
cccttatgggtggacagggaccctgaggtgaggttcgcgagcctcggcgtgggctcggcg
ctaaccgcggtgccgagcgggtgccttgccctcgccgccagctgccagaacatctccggc
gggctgtgggcgacgctgctgagcatcctgctggaccagcaggagtgcagcatggtgcgc
agggaggcagcatttattctacaaaatctgcttgtgatgcccatgcctgccagcatggaa
gaagctaaagactgtgcttggcagggtccgtgtgtgcacgatgagagctctggcctgtct
ctggtggggctgcctgccctgcaagccctcctgtaccactgccagttcttcgagcacatc
ggccaagctgtcagatcctgctaccagggcaggtacaccttcgacctgacctttcccaga
gctcctagccttgtgggcagcgtgaccgaagattttgatgactcactgaagcactggaga
tgccccactggaccattaaaccagggcccggagtcagactcccagtccacatcgagcact
ctgattcttccagaagagccaggtgaaagctgtgcgcctccgctgtcctcctccagggct
cccactcagcagattgacagccggctcgtcgcccagggccagagcgacaccagcgactcc
ggcagctctcgggactcccgcgccggggagggggccccggagccccgcgccatcgtcacc
ccccacctggcgtcggccgtcgcggggctgctggccaacctgctggccgtgctgcccgag
ttcaccctcagcgccctggagcacggccaaaccctggccgctttcgccagtctggtcgat
gtgggaccaatagaacggtgcctgggtgagctgaagacccccggcctgcttcccggcaat
gaggaagacgctaagaaccaggttctgagcctattccagttcctctccagtttttcaaaa
ttatttcagtcgtgtgtcatccaaaagccagagctggtctctcggatggagtttatcaag
cccttgctggccagtgcgtttaccctgctaacgctgaacatcgaagacattgatgcgggg
accagaagctccgcgctgcacacctgggtcgacgcgttggcgctcctggccgcgctgctg
agggccgacagcgcggcggtgctcccatctgtcgccggcgctctgggaaagcactggcag
ccattttcaggcgctctgtcgctctgcgtccggctgtccagcgagcggcccgcgctctac
tccgccgcgctccgctttctcgccgccgccctgtccgaggaagcgaagaggcgcgcgcag
gaagtggcccggttcggtaaaccgggcccggcgacgcctttatcccggctcctgagtgtc
tcacccggagcccagctgtgtgaagtcctgctggagagttttgagaagcaaatgtttcaa
gatcctctgaagaaggtttctgcatgggctctcatgtctttgcttgcaagcagtccgagt
gcgcagactcatgcattgaaagctggcctgattgacagttctgtggagcaaatgaagcac
acctatactcagctccatcttgagtccctcaaacctggaaaagcttctcaaaggaaaaag
gaagagagctgcatgagagaattaaagatgattttgcagatactcagaaactgcctttat
aatcatgatgaatgcaaaaccgcagcctccgactctcgcctggcgcacgcggtacacgcc
ctctggccctggcttctgcaggacgaccgcgccatggaggccgcgctggagctgctctgc
gtctacaccgccaactgtaccgcagcttgcagctcgctgtgctggagtaatgctgggcag
ggccctttccccagaggtcctacaaacagctctttgatgcacagtgtcatgaagctggcc
tcccacgtagccgctgaaaacagccccgtccagcgcctggctttttccctgctctccaac
cttgccatatcccgtgactgtaaaggggttctgcagaagagcaattttctgcagtatttc
ctgtcaataccactaccaaaaccagggtcaaagagccctaacccatcagtgagtttgtgg
ttgaagcttctgctgaatatgtcctttggcgaagatggtcagcagaccatactgaagata
aatggcagtttggaactgctgacagagatgtcacagtacaaacacaacggcaacagacca
gctgccctgctcattctgcacaatatctgcttcagttctgccaataaaccgaaaatcttg
gctagtgataaatctgttgaggtgttggtgtcctgtctggagagcaaactgccggacatc
cgtgcagtaggagcatcagcgctgtgggcactattacacaataatcagaaggcaaaggtg
actttgaagtgtccctctgtcagagctaaagttgatgaagcgtatgcctcagccaaaaaa
gaagcagaggagaacaaagacgaagccttgaactcttacctactgaagtgcctggcaaag
ctggctcatctgttgaataactga
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