Anguilla rostrata (American eel): 135254409
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Entry
135254409 CDS
T10705
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arot04515
]
135254409 (pcdh10a)
Cell adhesion molecules [BR:
arot04515
]
Cadherins
Protocadherins
135254409 (pcdh10a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
135254409
NCBI-ProteinID:
XP_064190586
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All DBs
Position
5:946878..960342
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AA seq
995 aa
AA seq
DB search
MIVLFLLFSWIVDGVVSQLHYSVPEEQDHGTFVGNIAEDLGLDITKLSSRRFQTVPSSRN
PYLEVNLENGGLYVNEKIDREQICKQSDTCLMHMEVFLENPLELFRVEIEIMDINDNPPS
FPETDITIEITESATPGTRFPVESAFDPDVGTNALRTYEMTTNSYFYLDVQTQGDGTKFA
ELVLEKSLDREQQSVHRYVLTAVDGGLPQRTGTALLVVKVLDSNDNVPAFDQSVYTVNLP
ENSPVGTLVIQLNATDMDEGPNGEIVYSFSSHNSQRVRELFNIDARTGRVEVIGEVDYEE
SNTYQLYVQGKDLGPNAVPAHCKVLVKLIDVNDNTPEIIFSTVTESVSEQAAPGTVIALL
SVTDRDSGENGQTHCEIVGDVPFKLKTSFKNYYTIVTDGLLDRENADSYTITVVAKDKGI
PSLATSKSIKVQLSDENDNAPRFVQSIYDVYVTENNVPGAYIYAVSAVDPDIGQNAHISY
SILECVIQGMPVFTYVSINSENGYLYALRSFDYEQLKDFSFMVQAKDSGTPELSSNATVN
VVIVDQNDNAPSVIAPLGKNGTAKEHLPRSAEPGYLVTRIVAMDVDDGENARLSYSILRG
NEMGMFRMDWRTGELRTARRVSSKRDPHHPYDLLIEVRDHGQPPLSSTASVIIVLVDSVV
EGHSGDRGSSKAKENSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLASD
CCLCCSSCCSRQARARKKKLSKSDIMLVQSTNVTSTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPTRSADTDHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRA
ELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGHSTGADLFSNCTEE
CKALGHSDRCWMPTFVPSDARQAADYRSNLHVPGMDSVPDTEVFESEEQTGDRSFSTFGK
EKSHHGTLERKEFDALLSGSRAPYKPPYLSRKRIC
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgttatttctcttgttctcgtggatcgtggatggggtggtttcccagctgcac
tattctgttccggaggaacaggaccatggcacgttcgtggggaatatcgcagaggatttg
ggcttggacataacaaaactttcgtcgcgcagattccagactgtgcctagttcgaggaat
ccgtacttggaggtgaatttggaaaacggggggctttatgtgaacgagaaaatcgatcgg
gaacagatctgcaaacagagtgatacttgtcttatgcatatggaagtgtttttggaaaac
ccactcgagcttttccgtgtggaaattgaaatcatggatatcaatgacaatcctccaagc
tttcccgagactgatattaccattgaaattactgaaagtgccactcctggaacgcgcttt
ccagtggagagcgcgttcgaccccgacgttggcaccaacgcgctccgcacatacgaaatg
accaccaacagttatttttacctcgatgtccaaacgcagggagatggcaccaaatttgcg
gagcttgtgttggaaaaatcactggacagagagcagcagtcggtgcacaggtacgtattg
acagcagtagacggtggattgccccagaggactggtacggcgttgcttgtggtgaaagtt
ctcgattcaaacgacaacgtccctgcctttgaccagtcggtgtacactgtgaatctgccc
gaaaattccccggtgggaaccctggtcatccagctaaacgccaccgacatggacgaggga
ccgaatggggaaattgtatattcgttcagcagtcacaattcccagagagtgagggaactg
ttcaatattgacgcgaggacgggtagagttgaagtgattggggaggtcgactatgaggaa
agcaacacatatcaactctacgtgcaaggaaaggatctcggacctaacgctgttcctgcg
cactgtaaagttctggtcaaactgattgacgtgaatgataatactcccgagatcattttc
agcaccgtaaccgaatcggtgagcgagcaggcggctccgggcactgtaatcgcgctgctg
agcgttacggacagggattcaggagaaaacggacagactcattgcgaaattgtcggagac
gtacctttcaaactcaaaacgtcgttcaagaactattacaccattgtcacagatggactg
ttggacagagaaaatgccgattcatacacaatcacagtcgtggcaaaagataagggcatc
ccgtcgcttgccactagcaagtctattaaagtgcagttgtcagatgaaaacgacaatgcc
ccgaggttcgtgcagtcaatttacgatgtatatgtgacagaaaataatgtgccaggcgct
tatatttatgcggtaagtgctgtagatcctgatatcggacaaaatgcccatatctcatac
tccatattggagtgcgtcattcagggcatgcctgtgtttacctacgtgtcaatcaactcg
gaaaacggttacctttatgctttgcgatcatttgattatgagcagttgaaagacttcagc
tttatggttcaagctaaggactctggtaccccagagctatcatccaacgctaccgtcaat
gttgtaatagtggaccagaacgacaacgctccctctgtcatcgccccgcttggcaaaaac
ggtacagcaaaggaacatttgcccagatctgcagaacctgggtacctggttacccgcatt
gtggctatggatgtggacgatggtgagaacgctcgcctctcgtacagcatactaagaggg
aacgagatgggcatgtttcgaatggactggaggacgggcgaattaaggactgcccggagg
gtctcgagcaaaagagacccgcaccacccgtacgacttgttgattgaagtgagggaccac
gggcagccacctctctcgtccactgcgagcgtcatcatagtgctcgttgacagcgtcgtc
gaaggccacagtggggatcgcggatcatccaaagccaaggagaactcgctggatttgact
cttatccttataatcgctctcggctccgtgtcgttcatctttctcctggcgatgatcgta
ctggccgtcaggtgtcagaaggacaaaaagctgaacatatacacctgcctggccagcgac
tgctgcctctgctgcagctcgtgctgcagcagacaggcgcgcgccaggaagaaaaagctt
agcaagtcagatataatgctggtacaaagcactaatgtcacgagcactgcccaggtgcca
gttgaggagtccgggagcttcggttcccaccatcaaaaccagaactattgttaccaggta
tgtctcactccggaatctgccaaaactgacctcatgttcctaaagccctgtagtccgact
aggagcgcagacactgaccacaatccctgtggcgccatagtgacaggttatacagaccag
cagcctgacatcatatctaacggcagcattttatccaacgagacaaaacaccagcgagca
gaactcagttacctggttgatagaccgagacgcgttaacagctctgctttccaggaagcg
gatattgtgagttctaaagacagcgggcatggcgacagtgaacagggagacagtgaccac
gacgccaccaatcgagggcattcgacgggtgcagaccttttctcaaactgcacggaggag
tgcaaagctctggggcactccgatcggtgttggatgcccaccttcgtgccctcggacgcc
cggcaagctgcagattaccgtagcaacctgcacgtgcccgggatggactcggtgcccgac
actgaggtatttgagagcgaggagcaaacgggcgatagatcattctccacctttggcaaa
gagaagtcacatcacggcaccctagagaggaaagagtttgatgcgcttctgtctggctca
cgtgcgccttacaaaccaccctatttgtcacggaaaaggatttgctag
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