Anguilla rostrata (American eel): 135255232
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Entry
135255232 CDS
T10705
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135255232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arot03021
]
135255232
03036 Chromosome and associated proteins [BR:
arot03036
]
135255232
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135255232
Coactivators
SAGA/TFTC/STAGA complex
135255232
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135255232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF1117
Motif
Other DBs
NCBI-GeneID:
135255232
NCBI-ProteinID:
XP_064192179
LinkDB
All DBs
Position
5:complement(38367072..38445340)
Genome browser
AA seq
1082 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVAQSNPTGSHTETRSAESTGAANHHLGR
IQPAQVGTVLDQQQQQGQHKAGVNQEPNSKEISSEKTVMPSSLSSIPPFEEGSITSGTGV
NASSGLQSHGASNITTLSASGLVTLPHPMDSISPANRDSVVGSGGTDTVTTETDPQKSHI
TSNIRTASTGIQSLNGNDGAVTLANCPTNTAVPAAVAAFQPGSGTLPLADNDNTVVSSAS
AVSASLNVVQTANATTFNVAHTDFHTSHAAINLDGRGTPTIALQRLPSHIMASIAQNGNG
TTLSALVQQGARLGLPAAAATPLVNHSTSADANNPKSDSPVQSKIIMSSQPTVVSSTTNP
VTSSAPVVNPPSSQQQSSVASSLPAASSPVPLTAISKPTVTLGQQTATTVGMIRPGTPSP
SPIMATSPQPQQLRPGLGTPQRIVAPQLLVRPPQQQTTIQLPPGFTIPPGMVLVRTEMGQ
LVMVPQQALAQAQAQAQAQNSISPRPATPTTGATFRVTTTQSPVSPQAIRPGPPVQAKVA
QSGSPAGSPALQAPPAASTKAAVTGGPVAAAVAVTVTASQQPSTVIAGGQTTPQAQPQTA
LPPQTAAAAVPASPVPGVSVISQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALV
QDLLDAKIEPEEFTNRLQSELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQQAKP
APPGGAAPAPGLVPGPTVRARHPNSVSATVSGALPGHGSAVGIKRAGVQGSQVRMPMVIT
QTVRGAVGKGPTIQASRSPMGFAVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLN
EESARILATNSDLVGTQIRSCRDETFLPTGLLHKRILETAKKFGVTEVPVEAVNLISHAT
QTRLRTVLEKVSTIAQHRMETCKDDEWYEQSTDVRSQLKFFEQLERMEKQRKEEQEREIL
LKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGAT
PSGTEVSGTSVGSPAGSGAPSTSSRQYSRHRITRVNLRDFIFYMEQERETARSLLLYRAL
LK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagatatgctcttctccgaggtggacgaaaaagca
gttagcgacttagtgggctcacttgagtcgcagcttgtggcccagagcaacccaacaggt
tcccatactgaaactaggagtgctgagtctacaggcgctgccaatcaccacttaggaaga
atacaacctgcccaagtgggtactgtactagatcagcaacaacaacaaggacaacataaa
gctggggtaaatcaagagccaaactctaaagaaattagctccgagaaaactgtgatgccg
tcttctctcagttccattccgccattcgaagaaggttccatcacttctgggactggagtg
aatgccagtagcggcttgcaatcacatggagcatctaacatcacaacactgtctgcatct
ggtctggtaactttaccacatccgatggacagcatcagtcctgcgaatagagattctgtc
gtgggttcaggagggacagatactgtaacgacagagaccgatcctcagaaaagtcacatc
acttcgaacataaggactgcttccacaggaatacagagtttgaacgggaacgatggagcg
gtgacgttagctaactgtccgacaaatactgctgttccggcggctgttgcggcttttcaa
cccggatctggaactttaccgttggctgacaacgataacacagttgttagcagtgccagt
gcagtcagcgccagtctgaacgtggttcagactgcgaacgccaccacttttaatgtagct
catactgatttccatacatcgcacgccgcgattaatctggatgggcgagggactcctaca
atagccctgcaaagactaccgagccacatcatggctagcatcgcacagaatggaaatggc
actacactttcggcattggtccagcaaggcgcacggctaggtctccccgccgctgcagca
accccgctagtcaaccacagcacaagcgcagatgccaataatccgaaatcagactctccc
gtgcagtcaaaaataatcatgtcgagccagcctaccgttgtcagttctacaaccaatcct
gtcacgtcgtcagctcctgttgttaaccctccttcgagtcagcagcagagttctgtagcc
agctcgttacctgccgccagcagccccgtccctctcactgctatatcgaaaccgactgtc
actttagggcaacaaacggccactaccgttggcatgataaggcctgggacgccttcgccg
tcacccataatggccacttctccccagccccaacaacttcgccctggattggggactcct
cagagaattgtggcacctcagctgcttgtcagacccccacagcagcaaaccaccatacaa
cttccacccggatttaccataccgccgggcatggtgctggtgcgcaccgagatggggcag
ctggtgatggtcccccagcaggctctggctcaggctcaggctcaggcgcaggcccagaac
agcatctccccccgacctgcgacccccaccaccggggccacattcagagtgaccaccact
cagtctcccgtgtccccgcaggccatccggccgggccctccggtgcaggccaaggttgct
cagtccggctcccccgccggcagccccgccctccaggccccgcccgcggcctccaccaag
gcagcagtgaccgggggcccggtggccgccgcggtggcggtgacggtgacggcttcgcag
cagccctccacggtgatcgcgggggggcagaccaccccccaggcccagccccagaccgcc
ctgcccccccagacggcagcggcagccgtccccgcgtcccccgtcccaggagtctctgtt
atttcccaggagatgcaagaaaacgtaaagaaatgcaagaacttcctggccacactcatc
aaacttgcttcccacaactcgccatctccagagacttctcgaaacgtgaaggccctggtc
caggacctgctggatgccaagattgaacctgaggaattcaccaaccgcctgcagtcggag
ctcaagtcctctccccagccctacctggtgccctttctcaagaaaagcctgcctgccctg
aggctgtcgctgctcaacagccagcagtcgctgacgcagcccctgcagcaggccaagccc
gccccccccgggggggccgcccccgcccccggcctcgtccccgggcccaccgtccgggcg
cgccaccccaacagcgtcagcgccacggtttccggcgccctccccgggcatggctccgcc
gtgggcatcaagagagcaggtgttcagggcagccaggtccgtatgccaatggtgatcacg
cagactgtcagaggcgcagttgggaagggaccaacaatacaagcaagcagaagtcccatg
ggcttcgctgttcaggtctccgcaaatcagaaaaacaagctgaacgaccctggaggcgga
tctttcagggacgatgatgacatcaatgacgtggcgtccatggcgggggtgaacctgaac
gaggagagcgcccgcatcctggccaccaactctgacctggtggggacccagatccgctcc
tgcagggacgagaccttcctgcccacgggactgctgcacaaacgcatcctggagacagcg
aagaagttcggcgtcaccgaggtcccggtggaagctgtcaacttgatctcgcacgcgacg
cagacgaggctacggacggtgctggagaaggtgtccaccatcgcgcagcaccgaatggaa
acgtgcaaagatgatgagtggtacgagcagtcgacggacgtgcggtcgcagctgaagttc
tttgagcagctggagaggatggagaagcagagaaaggaagagcaggagagagagatcctg
ctgaaggctgcaaaaagtcgctccaggcaagaggacccagagcaagctcggctgaagcag
aaagctaaggagatgcagcagcaggagctggcgcagatgaggcagcgagacgctaacctg
acggcgctggctgccatcgggccccggaagaagcgcaagctggactcccccggggccaca
ccgtcagggaccgaggtttcggggacctccgtgggctcgccggcgggctccggggccccc
tccacctcctcgcgccagtactcccggcaccgcatcacgcgcgtcaacctcagggacttc
atcttctacatggagcaggagagagagacggcccgctcgctcctgctctaccgggccctg
ctcaagtag
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integrated database retrieval system
