Anguilla rostrata (American eel): 135255254
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Entry
135255254 CDS
T10705
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135255254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135255254
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135255254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
135255254
NCBI-ProteinID:
XP_064192230
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Position
5:39523619..39546098
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AA seq
716 aa
AA seq
DB search
MSAEGTSDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLRKNMLLHFSFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVSAALMEY
YCSKDKSVAFKIFELGLKKYGDVPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFMAFKEEYEGKETALLVDRYKFMDLYPCSGSE
LKALGYKDVSRAKLAALIPETVVAPSAPALKDEADRKPEYPKPDTNQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETMDVALEMIAG
RQPESAGEGNGPTENNGAPSKSLKRPSADSDEEEDKSAIAPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaaggaacctccgaccaggctgcagagtatatcccagagaaagtgaagaaa
gcggaaaagaagttggaagaaaacccatatgaccttgacgcgtggagcatactgattcga
gaagcacagaaccaacctatagacaaagcaaggaagacgtatgagcgacttgtcgcccag
ttcccaagttctggcagattctggaagctatacattgaagctgagatcaaggctaaaaac
tatgacaaagttgaaaagctgtttcagaggtgtctcatgaaagtgcttcacatcgatctg
tggaagtgctacctttcttacgtccgcgagaccaagggcaagctgccaagctacaaagag
aagatggcacaagcctatgatttcgccttggacaagatcggtatggagatcatgtcatat
cagatatgggtggactacataaacttcctaaaaggagtcgaggcggtgggctcgtacgcg
gagaaccagcgaatcacagccgtgcgccgggtctaccagaggggctgcgtcaaccccatg
atcaacatcgagcagctgtggagggactacagcaagtacgaggaggggatcaatgtgcat
ctggctaagaaaatgatcgaagaccgcagcagggactacatgaacgccaggagagtggca
aaggagtacgagacggtgatgaagggcctggacaggaacgccccgtcggtgcccccccag
aactccccccaggaagcgcagcaggtggagatgtggaagaagtacatccagtgggagaag
agcaacccgctgcgaacggaggaccagaccctcatcaccaagagagtcatgtttgcctac
gaacagtgcctgctggtcctgggacatcaccctgacgtctggtacgaggccgcgcagtac
ctggagcagtccagcaaactgctggctgaaaagggggacatgaacaacgccaagctgttc
agcgacgaggcggccaacatctacgagcgcgccatcggaaccctgctgaggaagaacatg
ctgctccacttctccttcgccgactacgaggagagtcgaatgaagcacgagaaggtgcac
agcatatacaaccgtctcctggccatagaagacattgacccaacgctggtttacatccag
tacatgaagttcgcgaggagagccgaggggatcaagtcgggccggaccatcttcaagaag
gcccgggaggacgcgcggacgcgccaccacgtctacgtgtcggccgccctgatggagtac
tactgcagcaaggacaaatcagtggcctttaagatatttgaacttggcctaaagaaatac
ggagatgttccagagtatatactggcatacattgattatctttctcaccttaatgaggac
aacaacacccgggttctgttcgagagggttctgacatcggggagcctgtcaccggagaaa
tccggggagatttgggcccgcttcctggcctttgaaagcaacatcggcgacctggccagc
atcctgaaagtggagaggcggaggttcatggccttcaaagaggagtacgaagggaaggag
acggccctgctggtggacagatacaagttcatggacctctacccctgctccggcagcgag
ctcaaagccctgggctacaaggacgtgtcccgggccaaactggcggcgctaatcccggag
acggtggtcgccccatctgcgcccgcgctgaaagacgaggcggacagaaagccggagtac
cccaaacccgacaccaatcagatgatccccttccagccccgccacttggcccctccagga
ctccaccctgttccagggggggtattccctgttccccctgctgctgtggtcctcatgaag
ctgctgcccccgcccacctgcttcacgggtcccttcgtgcaggtggatgagttgatggag
actttcagaaggtgcacacttccagaaacgatggacgttgccttggagatgatcgcgggg
aggcagccggagtcggccggcgaggggaacggcccgacggagaacaacggcgcgcccagc
aagtccctgaagaggcccagcgccgactccgacgaggaggaggacaagagcgccatcgcg
ccccccgtgcacgacatctaccgggcgcggcagcagaagaggatccggtga
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integrated database retrieval system
