Anguilla rostrata (American eel): 135255301
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Entry
135255301 CDS
T10705
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03420
Nucleotide excision repair
arot04115
p53 signaling pathway
arot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135255301 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
135255301 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
135255301 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arot04121
]
135255301 (ddb2)
03400 DNA repair and recombination proteins [BR:
arot03400
]
135255301 (ddb2)
Ubiquitin system [BR:
arot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135255301 (ddb2)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
135255301 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
135255301
NCBI-ProteinID:
XP_064192352
LinkDB
All DBs
Position
5:42182830..42194522
Genome browser
AA seq
508 aa
AA seq
DB search
MARKKTIDTSEPKQTTGTVSCGGRKRHKEALEDSISRKLRKKIDGQTEAGGDTQPNGKWL
GSQKKDRHTSIVHYIYKNTLGQNIHSQMRQCFQEPFLRSLASYRLYRTASPFDRRVTCLE
WHPTHPSTLAVASKSGDIILWDYEVLKKTTFIQGKGPGDYIAGMKFFPTDSTKMFTASGD
GTLSLQSIDVGKAQVVSGTPDCEHHHHNVCVWYCSLDVSSSRQVVVTGDNMGRVLLLGME
GETIWNHKLHKAKVTHAEFNPCCDWLLATASVDHTVKLWDLRSIKDKSSFLHEMPHEKAV
NSAYFSPMDGSKLLTTDQYDQIRVYCSSDWSNPQKIISHPHRQFQHLTPIKATWHPMYEL
IVAGRYPDQRVCRGELRTIDIFDANTGALKFQLHDPNAPGIISLNKFNPMGDVLGSGMGF
SILIWNREDIVNKGQDRLMREMAEETGLTGGTSSSRAQHRSHQRPGDRRGTAEKTKLKKK
MESLESPGTKTKTKSKENVKPQKDKMKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagaagacgattgacacatctgaacccaaacaaacaacgggcacggtttct
tgcggaggaaggaaacggcacaaggaagcattagaggacagtatatccagaaagctaaga
aagaagatagacggccaaaccgaagcaggaggtgacacacagcccaatggaaagtggctt
ggcagtcagaagaaagacaggcataccagcatcgtgcattacatttacaagaacaccttg
gggcagaatatccactcacaaatgcggcagtgttttcaagagccgttcctgcggtctctg
gcctcgtaccggctctaccgcacagccagccccttcgaccgcagagttacatgcctggaa
tggcacccaacgcaccccagcacactggccgttgcgtcgaagagtggggacatcatcctg
tgggactacgaggtcctgaagaagaccacctttatacaagggaagggacctggggactat
atagcggggatgaagttctttcccacggactcgaccaaaatgttcactgcctcaggagat
ggcacgctttccctgcagagcattgatgtcgggaaagcccaggtggtgtccggaacgcca
gattgtgaacaccatcaccacaatgtttgtgtttggtactgcagcctggacgtttcctca
agccgtcaggtggtggtgactggtgacaacatgggacgggtgctgcttctgggcatggag
ggagagacaatctggaatcacaagctgcacaaagcgaaggtaacccatgcagaattcaac
ccttgctgtgattggctgctggctacggcatccgtagaccacacggtcaaactgtgggac
cttcggagtatcaaagacaagagcagctttttacatgagatgccacatgaaaaggctgtc
aactctgcctatttcagccccatggatggctccaagctccttaccactgatcagtacgat
caaatcagggtttactgctcttctgattggtcaaatccccagaagatcatctcgcaccca
caccgccagtttcagcacctcacacctatcaaggccacctggcaccccatgtacgagctc
atcgtggctggccgctaccccgatcaacgagtctgcaggggtgaattgaggaccatcgac
atctttgatgccaacactggggctctcaagtttcagcttcatgaccccaatgccccaggc
attatatctctcaacaagttcaacccaatgggagacgtgttgggatctgggatggggttc
agcattcttatttggaaccgagaggacattgtgaacaagggacaggacaggctaatgaga
gaaatggcggaggaaactggcctgaccggtggtaccagcagctccagagcccagcatcgg
tcccaccagcgccctggggataggaggggaacagctgaaaagaccaagctcaagaaaaaa
atggaaagtctggaatcgccagggaccaaaacaaaaaccaaatccaaagaaaatgtcaaa
cctcaaaaagacaagatgaaaaaataa
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