Anguilla rostrata (American eel): 135255516
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Entry
135255516 CDS
T10705
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arot03000
]
135255516
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
arot03310
]
135255516
Transcription factors [BR:
arot03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135255516
Nuclear receptors [BR:
arot03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135255516
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135255516
NCBI-ProteinID:
XP_064192867
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Position
5:48858902..49074694
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSASEPATPVRDTPVNLETLRKADQQAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
TYGLSANGLTELHEDLGGYMDGHTPDGAKADPAVGGFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGDTSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVENYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAYDSQNNTVYFDSKYAGPDVFKSLGCDDLITSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHILQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRTHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcctcctgatccagcaagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggacaccccggtaaacctggagactctccgaaaagctgaccagcaagctcca
gtacgaaggcaaacctgttccagcaccaacagaggtatttcagtaacaaagaagacgcac
acttctcaaatcgaaattattccctgcaaaatctgtggcgataaatcatccggaatccat
tacggcgtgattacgtgcgaaggatgcaagggcttcttcaggagaagccagcagagcaat
gctgcgtactcctgcccccgtcagaagaactgcctgatcgaccgaaccagccgcaaccgc
tgccagcactgccggctacagaagtgcctggcggtgggcatgtcccgggacgcggtgaag
tttggccgaatgtctaagaagcagagggacagcctgtacgcggaggtgcagaagcaccgg
ctgcagcagcagcagcgcgaccaccagcagcagccgggggaggcggagcctctcacgccc
acctacggcctgtccgccaacggcctgaccgagctgcacgaggacctcggcggctacatg
gacggccacacccccgacggcgccaaggccgacccggccgtgggcggcttctacctggac
atccagccctcgcccgaccagtccggcctggacatcaacggcatcaagccggagcccatc
tgcgacttcgcccccggctccgggttcttcccctactgctccttcaccaacggggacacc
tcccccaccgtgtccatggcagagctagaacatctggcccagaacatctccaagtcccac
atggagacgtgtcagtacctgcgggaggagctccagcagatgacctggcaggccttcctg
caggaggaggtggaaaactaccagaacaagccccgggaagtcatgtggcagctgtgtgcc
atcaaaatcactgaggccatccagtacgtggtggagttcgccaagcgcatcgatggcttc
atggagctgtgtcagaatgatcagatcgtgcttctgaaagcaggttctttggaggtcgtg
ttcgtgagaatgtgtcgtgcctacgactctcagaacaacacagtctatttcgacagcaag
tatgcagggccagatgtcttcaaatcattaggatgtgatgatttgatcacctcggtcttt
gagtttgggaagaacctatgctctatgcatctgtctgaagacgaaatcgctttgttctct
gcatttgtgttaatgtctgcagatcgctcctggcttcaggagaaggtcaaggtggagaag
ctgcagcagaagatccagctggcccttcagcacatcctgcagaagaaccaccgggaggac
ggaattttgacaaagttgatatgcaaagtgtcaacactgcgagccctgtgcagcagacat
acggagaagctcacggctttcaaagcaatatacccggacattgttcgcacccacttcccc
cccctttacaaggagcttttcggttcggacttcgagcagtccatgcctgtggatgggtaa
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