Anguilla rostrata (American eel): 135255937 Help Entry 135255937         CDS       T10705                                  Symbol prpf19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism arot  Anguilla rostrata (American eel) Pathway arot03040   Spliceosome arot04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:arot00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     135255937 (prpf19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     135255937 (prpf19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:arot03041]     135255937 (prpf19)    04121 Ubiquitin system [BR:arot04121]     135255937 (prpf19)    03400 DNA repair and recombination proteins [BR:arot03400]     135255937 (prpf19) Enzymes [BR:arot01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      135255937 (prpf19) Spliceosome [BR:arot03041]  Complex B   Other components    Prp19 complex     135255937 (prpf19)  Complex C    Prp19-CDC5 complex     135255937 (prpf19) Ubiquitin system [BR:arot04121]  Ubiquitin ligases (E3)   U-box type E3    135255937 (prpf19) DNA repair and recombination proteins [BR:arot03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     135255937 (prpf19) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st DSE1_N ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR41 NBCH_WD40 CFAP251_N ASA1 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_RIG_2nd PAC11 PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 U-box Beta-prop_ACSF4 PROPPIN Alpha_humulene_synt Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Tricorn_2nd Cep57_MT_bd CCDC13 zf-Nse ATG16 Motif Other DBs NCBI-GeneID:  135255937 NCBI-ProteinID:  XP_064193840 LinkDB All DBs Position 5:63341885..63351504 Genome browser AA seq 505 aa AA seqDB search MSLVCAISNEVPERPCLSPVSNQVFERRLIEKYIAENGADPINGQPLSEEQLIDIKVSHP VRPKAPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVVPQIVPASQPPAAAGGGELMEVSEQVGMTPEVIQKLQDK ATVLTTERKKRGKTVPEELVRAEDLSKYRQVASHAGLHSASVPGILSLDLCPTDTNKVLT GGADKNVVVFDKREEQIVATLKGHTKKVTSVIYHPSQAVVFSASPDSTIRVWSVSGGNCV QVIRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDEAASCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDYSLKLW DLRKLKNFKTISLDSSYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFTEHSGLVT GVAFGEHAQFLTSTGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctttagtttgtgcaatctctaacgaggtcccggagcgcccgtgcctgagtcccgtc tctaaccaggtgtttgagcgccggctcatagagaagtacatcgctgagaatggcgccgat cccatcaacggccagccactatccgaggagcagctcatcgacatcaaggtttcccaccct gtcagaccgaaggctccttctgccaccagcattcctgccattctcaaagccctgcaggat gaatgggacgcagtgatgctgcacagcttcacgctgaggcagcagttgcagacgacgcgg caggagctctcgcacgccctgtaccagcacgacgccgcctgcagagtcatcgcccgcctc accaaggaggtgaccgcggcgcgtgaggctttggccactctgaagccccaggctggactg gttgtcccccagattgttcctgcctctcagccaccggctgcggctggtggaggcgagctg atggaggtgagcgagcaggtgggaatgactccagaagtcatccagaagctgcaagacaag gccactgtccttaccacagagagaaagaagagggggaagactgtgccagaagagctggtt agagctgaggacctcagcaagtaccgacaagtggcctctcatgctggtctccacagtgcc agtgttcctggaattctctctctggacctgtgccctacagacaccaacaaagtgctcact gggggcgccgataagaatgtggtggtgtttgataagagagaggagcagatcgtggccact ctgaagggccacaccaagaaagtcacctctgtcatctaccacccctcccaggcggtggtg ttctccgcctctccggacagcactatccgggtgtggtccgtctcaggtgggaactgtgtg caggtgatccgcgcccacgaggcgggcgtgaccggcctctccctgcacgccaccggggac tacctgctgagctcctctgaggaccagtactgggccttctctgatatccagactggccgg gtcctcactaaagtgaccgatgaggcagctagctgtgctctgacctgcgcccaattccac cctgacgggctcatttttgggacgggcacggccgattctcagataaagatctgggacctg aaggagcgcaccaacgtggccaacttccccggccactctggccccgtcaccgccatcgcc ttctccgagaacggctactacctggccacaggtgctcaggattactccctgaagctgtgg gatcttagaaaactgaaaaatttcaaaaccatcagcctggacagcagctatgaggtgaag tcgctggtgtttgatcagagtgggacgtacctggctgtcggggggtcagacatcagggtg tacatctgcaagcagtggtccgaagttctcaacttcaccgaacactccgggctggtgacg ggcgtggcctttggtgagcacgctcagttcctcacctccaccggaatggaccgaagcctc aagttctacagcctgtag

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