Anguilla rostrata (American eel): 135256419
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Entry
135256419 CDS
T10705
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arot03036
]
135256419 (hfm1)
Enzymes [BR:
arot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135256419 (hfm1)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Meiosis-specific proteins
Others
135256419 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
135256419
NCBI-ProteinID:
XP_064194239
LinkDB
All DBs
Position
6:complement(8651028..8671111)
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AA seq
1496 aa
AA seq
DB search
MLDPEDGTLPLDSLFFERPIIHKVKPLRQEQGDWKDSYERSKTSLPPLRREDWINNLPKQ
RGDVVNCSVTDESPGQDGSFLWTQDLLGRAGNDTDQPRDSDHLYTGSPFPSLFNQNSGER
SQFRRSLFKPPPRMVSESGDHGNSAPSQRTFQTSACFNGQVSKETEDPFITSTHIAPSPL
TGSGLRRACNPPALKHNTGTKKAHILPLTPRPLNIQGGSGSGILRPVTEISAQFRSVFRE
FPFFNYVQSKALDDILYTGKNFVACAPTGSGKTVLFELAIVRLLMETPSPWRNIKIVYMA
PIKALCSQRYENWKQKFGPLGLNCKELTGDTEIEDFFEIQDAHLIMTTPEKWDSMTRKWR
DNCLVQLVRLFLIDEVHVVKDTTRGATLEVVVSRMKTMHTYRSAENPDPSLAMRFVVVSA
TIPNIADIADWLSDGTGPATCLEMDESFRPVKLRKVVLGFPCSSGQNDFKFDLALNYKMA
NVIQTYSDEKPTLVFCSTRKGVQQSAAVLAKDARFIMSAEHKQRLMKYANSLHDSKLRDL
VMYGVGFHHAGVDMSDRKTIEDAFTLGDLPVLFTTSTLAMGVNLPAHLVVIKSTTHYVGG
SCEEYSETDILQMTGRAGRPQFDTTATAVIMTRSQTKDKYSRLMSGAETIESSLHTHLVE
HLNAEIVLHTISDVNVALDWIRSTFLYIRSLKNPGHYGFPPNLDRAGIEMKLQELCLKNL
NELAAIGLITMDEDVNFKPTEAGKLMARYYIAFETMKQFSLLCGTETQPELLQLISKSKE
FSDIQLRVNEKRTLNTLNKDKNRITIRYPMEGKIKNNEMKVNCLIQAQLGSIPVQEFGLS
QDTGKIFRIGIRISKCLSEFLKQLPKKSFSALLNSLILAKCFRARLWENSPFVSKQLEKI
GLTLSTAMVNAGLTTFLKIEQTNARELEMIVNRHPPFGNQIKEAVVHLPKYEVSLEQIPR
YNVATAEILVTVNLKNYEQLMSKRTAPDHHYVTLIIGDCDNNVVFLQNITDSLLLKSGSW
SRKIEVTRSPKGEELSVNLISSEFVGLDIQQKYSAFYSGAKRFASEMDSWENRQSTAKRE
QGAEQRTQATAARQEHGKAPRAESAIQKAQGIAQRPNAKPLTAGPLGNDSSKENMSVEQG
KRECNHFCKNKEQCGHDCCKVGVHMVLKRPSNAESGFSSYLRDLKNRNETLVQTPVKRLK
MKMCSQARAAAMHQFSYKPKDILPAVPRCEGNQYFHPTTEENVDYFEDSETPRQISGGPY
YDDYSSYLEDMTEEEAPVQAASEPQNVPVWTRSDAGNKGAFSSTVTGQSCGSFGKRSTHH
SKDSGCFSPDDLSVTFDLGVDDWDDIDDANLVNASEISYTKIPTTDCNTQRDYSTPLTSY
EQPKSIFAQLSRSHTVSSTDVRPRGSQCLGHIPNKQPLDNWSQSDDGLKTFNEMNAYRMS
PSFPKQKSSHSATLNRTLNFFSRPNAVERNENSGRLQGKEDSSDVEAFLGIFEGIF
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgttggatccagaagatggcacattacctttggatagcctgttttttgaaagacccatt
atccataaagtaaaaccactccgccaggagcaaggtgattggaaggattcttatgagagg
tcaaagacatctttacctcctttgagaagagaagattggatcaacaatcttccaaagcaa
agaggggatgtcgtaaattgcagtgtaacagatgagtcacctggacaggacgggtccttc
ctctggactcaagatctcctgggccgtgctggaaatgatactgaccagcctcgagactct
gatcatctgtatacagggagtccttttccttcactctttaaccaaaacagtggagagcgc
tcacagttcaggagaagtttatttaaaccccctccaaggatggtctcagaaagtggtgac
catggcaacagtgcaccaagtcaaagaacattccagacaagtgcctgtttcaatgggcag
gtttctaaagagacagaagatccattcatcacatccacccatattgcccccagtcctttg
acaggttcagggctgcgccgtgcatgcaaccctcccgctttaaagcacaacacggggacg
aaaaaagcccacatccttcccctgacacctcggcctctcaatatccaagggggatcaggg
tcagggattctccgtccagttactgaaatctctgcacaattcagatctgtcttcagagag
ttccctttcttcaattacgttcagtctaaagccctggatgacattctttacacaggcaaa
aattttgtcgcttgtgcacccaccggctcaggaaaaacagtgctctttgaattggcaatc
gttcggttgctaatggaaaccccttcaccctggcgtaatatcaaaattgtatacatggca
ccaattaaagctctttgcagtcagcgatacgaaaactggaagcagaaatttgggcctttg
gggctgaactgcaaggagctgacaggagatacagaaatcgaggacttctttgagattcaa
gatgctcatctcatcatgactacaccagaaaagtgggacagcatgaccaggaagtggagg
gataactgtcttgttcagctggtccggctcttcctcatcgatgaggttcacgtggtgaag
gacacgactcgtggcgcaacactcgaggtcgtagtcagcaggatgaaaacgatgcacacc
taccgctctgctgaaaacccggatccaagcctcgccatgagatttgtggtggtttcagcg
accattccaaacattgctgacatagccgattggctctcggacgggacgggcccggccacc
tgcctggagatggacgagagcttcaggcccgtgaagctgaggaaggtcgtgctgggcttc
ccctgcagcagcggtcagaatgacttcaagttcgacctcgccctcaattacaaaatggcc
aacgtcatccagacctactccgacgagaagccgacgctcgtgttctgctccacgaggaag
ggggtgcagcagtccgcggcggtgctagctaaagacgctcgattcatcatgagcgccgaa
cacaagcaaaggttgatgaagtatgcaaattctctgcatgattcaaaactgagagatctg
gtgatgtatggagttggtttccatcacgctggggtcgacatgtctgacagaaaaacaatc
gaagatgctttcacgctcggagacctaccagttctttttacaaccagcactttggcaatg
ggcgtgaacttacctgctcatcttgtggtgatcaagtccaccacgcactacgttggaggg
tcgtgtgaggagtacagtgagaccgacatactgcagatgactggacgagcaggccgaccc
cagtttgacacaacggcaactgcagtgatcatgaccaggtcccagacaaaagacaaatac
tcccggttaatgagtggggctgaaaccatcgagagcagcctacacacacaccttgtggag
cacttaaatgcagagatcgttctgcacactatctccgatgtgaacgtggctctggactgg
attcgctctacgttcctctacattagatctctgaagaatcctggacattatggtttccca
cctaacctggacagagctggaattgaaatgaaactgcaagagctctgtctgaagaacctg
aatgaactggcggccataggcttgatcactatggatgaagatgtcaacttcaaacctacc
gaagcagggaagcttatggcccgatactacattgcatttgagaccatgaaacagttcagt
cttctgtgtggaacagaaacacagcctgaactgcttcaactgatctccaaaagcaaggag
ttcagtgacattcagctgagagtgaatgagaagcgaacgttgaacaccttgaacaaggat
aaaaacaggataacaatcaggtaccccatggaggggaagataaaaaataatgaaatgaaa
gttaactgcctaatacaagctcagcttggcagcatcccagttcaagaatttggattgtca
caggacactgggaaaatatttcgaattggaatacgaattagcaaatgcttgtctgagttc
ctgaagcagttgccgaagaagagcttctcagcactgttgaactccctgattttggccaag
tgcttccgggccaggctttgggaaaattctccattcgtctcaaaacagcttgagaaaatc
ggactgacactctccactgccatggtgaacgcgggcctgaccacattcctcaagatcgag
cagacgaacgccagagagctggagatgattgtcaacagacatccgccatttggtaaccag
atcaaggaggctgtcgtgcatcttccaaagtatgaagtcagtttggaacagattccaaga
tacaatgttgcaacagcagagatccttgtcacggtgaacttgaaaaactacgagcagctg
atgtcaaagagaacagctcccgaccaccattatgtcaccttaattataggggattgtgac
aataatgtggtgttcctgcaaaacatcacagactctctcctgctgaagtctggaagctgg
tcaaggaaaattgaagtcacaagaagtcccaaaggagaggagctcagtgtgaacttgatc
agctcagaatttgtgggcctggacattcagcagaagtacagcgcgttctactctggagcg
aagcgctttgcatctgaaatggacagttgggagaaccggcagtctacggcaaagagagaa
cagggtgcagagcagagaacgcaagctacagcagcgagacaagaacatggcaaagcaccc
agagcagagagtgcaatacagaaagcacagggcatcgcacagaggcctaatgccaagccc
ttaactgccggccccttaggcaacgattcttcaaaagagaacatgtccgtagagcaaggg
aaaagagagtgcaaccacttctgtaaaaacaaggagcaatgtggacatgattgctgtaaa
gttggtgtacacatggtgctgaaaaggccctcaaatgcagagtctggtttttcttcctac
ctcagagatttgaaaaacaggaacgagacactcgtgcagactcctgttaagcgtctgaag
atgaaaatgtgcagccaggctcgggctgctgccatgcaccagttctcatacaaacccaaa
gacatcctgcctgctgtcccaaggtgtgaagggaaccaatattttcatccaacaacagag
gaaaatgtggactactttgaggattctgaaacacctcggcagatatcaggagggccgtat
tatgatgactatagcagctacttagaagacatgactgaggaggaagcacctgtacaagct
gcttctgaaccacaaaacgttccggtgtggacgcggtctgacgctggcaataagggagcc
ttcagcagcaccgtgacgggccaatcctgtggttcttttggaaagaggagcacacatcat
tccaaggatagtggctgcttctcaccggatgatctcagtgtgacctttgacctgggagtg
gatgactgggatgatattgacgatgccaatttagtgaatgccagtgagatttcctacacc
aagatcccgaccactgactgcaacacacagagagattactcgacaccactgacttcttat
gaacaacccaaatctatcttcgctcagctcagtagatcacacacggtgagctccaccgat
gtcagacctcgagggtctcagtgtcttggacacattccaaataaacaaccactggacaac
tggagccaatcagatgatggccttaaaactttcaatgaaatgaatgcatacaggatgagt
ccctccttcccaaaacagaagtcatcacactcggccaccttgaatagaacgctcaatttc
ttttcacggccaaatgctgtggaacgcaatgaaaattctggcagattacaagggaaagaa
gactcttcagatgttgaagcattccttggaatatttgaaggaatattttag
DBGET
integrated database retrieval system
