Anguilla rostrata (American eel): 135256946
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Entry
135256946 CDS
T10705
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03030
DNA replication
arot03410
Base excision repair
arot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135256946 (zgc:110269)
03410 Base excision repair
135256946 (zgc:110269)
03450 Non-homologous end-joining
135256946 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arot03032
]
135256946 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
arot03400
]
135256946 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arot04147
]
135256946 (zgc:110269)
DNA replication proteins [BR:
arot03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
135256946 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
135256946 (zgc:110269)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
135256946 (zgc:110269)
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135256946 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
HHH_5
Angiomotin_C
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
135256946
NCBI-ProteinID:
XP_064195324
LinkDB
All DBs
Position
6:complement(26241557..26252850)
Genome browser
AA seq
353 aa
AA seq
DB search
MGITKLADLIRQEAPSAISYKDISDYTGKTVAVDASIVLHQFRTAISSFHNRDGVNLSPL
TGLFFRTLCFLEHDIKPVFIFDGHPPEQKKSVLERRAKANGWSSSYCSSTVSTRIQDCQS
LLQCLGVPYVQAPGDAEAYCAQLVKDGKVDAVASEDMDTMAFGSDLLIRQLNAKKNSEVM
EYSLPKALDALQLTYKQFVDLCILLGCDYCEKIQGLGPKKALKLIQQHKTIEDVVLHINR
ETHPVPLSWRYTEARELFFRAPRGSPPDLVWKEPDEQELVNFLCHKRHVKEMRVRGRMEK
FHETLRERRREREETNGAEKSKQTYIKDFFRVTRKRKAPDVVEASREKRAKPQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgggtataacaaaacttgctgacttgattcgccaggaagcacccagtgccatctcctac
aaggatataagtgactacacaggaaaaactgttgctgtggatgcgtccattgtgcttcac
cagttccgcactgctatttcaagttttcataatcgcgatggagtaaatctgagccccctc
actggcctgttctttcgcacactgtgctttctggagcatgatatcaaacccgtcttcata
tttgatgggcatccacccgagcagaagaagagcgtgctggagagaagagcaaaagccaat
ggctggtcgagctcctattgctccagcacagtttctactcggatccaggactgccagagt
ctcctgcagtgtctgggtgtgccttacgttcaggcgcctggagatgcagaggcctactgt
gcccagctggtgaaggacgggaaggtggatgctgtggcctctgaggacatggacaccatg
gcgttcgggagtgacctgctcatccgccagctgaatgccaagaagaacagtgaggtcatg
gaatactctctgcccaaggcactggacgctctacagctgacatacaaacagtttgtggac
ctgtgcatcttgctggggtgtgactactgtgagaagatacagggccttgggccaaagaag
gccctgaagctgatccagcagcataagaccatagaggatgtggtgttgcacatcaacaga
gagacacaccctgtcccactgagctggaggtacacagaagcccgtgagctgttcttccgg
gctcctcggggaagtcctccagatctggtttggaaagagcctgatgagcaggagctggtc
aacttcctgtgccacaagagacatgtcaaggagatgagggtaagaggacggatggagaag
ttccatgagactctgagggagaggagaagagaaagagaggagacaaacggagcggagaag
agcaaacagacctacataaaggacttctttcgggtgactcggaagagaaaggccccagac
gttgtggaggccagcagagagaagagggcgaagcctcagtga
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