Anguilla rostrata (American eel): 135256957
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Entry
135256957 CDS
T10705
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot00100
Steroid biosynthesis
arot01100
Metabolic pathways
Module
arot_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
135256957 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
arot01006
]
135256957 (fdft1)
Enzymes [BR:
arot01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
135256957 (fdft1)
Prenyltransferases [BR:
arot01006
]
Terpene biosynthesis
Squalene/phytoene synthase
135256957 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
135256957
NCBI-ProteinID:
XP_064195339
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All DBs
Position
6:complement(27384844..27398581)
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AA seq
458 aa
AA seq
DB search
MAGPCCKSTVYFLVLKRSLSVPPRSSVTAARPTLSAGRLGERGVQEGCWAARPNALRTAG
SYRHPVFLCFSCQESMSESLRTCYIYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALD
TVEDDMSIPLEKKVPLLHNFHNFLYDPEWNFTESQEKDRQVLEDFPTISVEFRNLGQEYR
EVISDICYCMGVGMAEFLEKKVGSMKEWDKYCHYVAGLVGIGLSRLFSASQLEDPEVGQD
TELANSMGLFLQKTNIIRDYLEDQQDGRAFWPKEAWSQFANHLEDFAKPRHLDSALACLN
LLVTDALRHVPDVISYLTRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQ
AVTLMMQATNMGAVRSIISQYSQEILQKVSLTDPSRDKTLLILQLIREKTLSQDMLPSRA
HHLSPVYLSAAMLLAALSWQYLSATAGQAAGGADMQGH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctggaccttgttgcaagagtacggtgtactttttagtgttgaagcgtagtctctcg
gtccctccccgaagctccgtaactgctgcgcgacctacgctctccgctggcaggctgggc
gagcgaggtgtccaggaagggtgttgggccgcccgcccgaatgccctcagaacggctggt
tcttaccgacaccccgtatttctgtgtttctcctgccaggaatctatgagcgagagcctg
cgaacatgttatatttatttgaatcagacaagccggagtttcgcagccgtaattcaagcg
ttggacggagagttacggcatgcagtgtgtattttctacctggtcctacgggctctggac
acagtggaagatgacatgagtatcccactcgagaagaaggtgcccctgctgcacaacttc
cacaacttcctgtatgatccggagtggaacttcacagagagccaggaaaaggaccgacaa
gtgctggaggacttccccacgatttcggttgagttccgcaatctgggccaggagtatcgg
gaggtgatatctgatatctgctactgcatgggagtaggaatggctgagttcctggaaaag
aaagtaggctcaatgaaggagtgggacaagtactgtcactatgtggctgggctggtgggc
attgggctgtcccggctcttttcggcctcccagctggaggatcctgaagttgggcaggac
actgagttggccaactccatgggcctctttctgcaaaagaccaacattattcgagactac
ctggaagaccagcaggatggacgggccttctggccaaaggaggcttggagccagtttgcc
aatcacctggaagactttgccaagccacggcatctggactccgctctcgcctgcctgaac
ctgctggtgactgatgccctccgacacgttccagatgtcatcagctacctgacacgcctc
cgtaaccagagcgtctttaacttttgtgccatccctcaggtcatggccatagccacactg
tccgcatgttacaacaacccacaggttttccaaggagtggtgaagattcggaagggccag
gctgtaacgctcatgatgcaagcaaccaacatgggtgctgtacggtccatcatctctcag
tacagccaggagattctacagaaggtgtccctcactgacccatctcgggacaagacactg
ctgatcctgcagttgatccgtgaaaagactctatcccaggacatgctcccgtcccgtgcg
caccacctgtcccccgtctacctgtcagccgccatgctgctagctgccctgagctggcag
tatctgagtgccacagccgggcaagccgcagggggtgcggacatgcagggccactag
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