Anguilla rostrata (American eel): 135257052
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Entry
135257052 CDS
T10705
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04137
Mitophagy - animal
arot04140
Autophagy - animal
arot04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135257052
04137 Mitophagy - animal
135257052
04148 Efferocytosis
135257052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arot03000
]
135257052
Transcription factors [BR:
arot03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135257052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
135257052
NCBI-ProteinID:
XP_064195521
LinkDB
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Position
6
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AA seq
749 aa
AA seq
DB search
MMDTGVVTEKKSRVSSERRKEKSRDAARCRRGKESEVFYELANELPLPHNVVSHLDKASI
MRLAISFLRMRKLLNSNKESSLESGSESDLDSQLNGFYLKALEGFLMVLSEDGDMVYLSE
NVNKCMGLSQLDLTGHSVFDFTHPCDHEEIRDMLIHRTGPSKKGKEPNTERSFFLRMKCT
LTSRGRTVNVKSSTWKVLHCLGHIRMYDEGGDSGESGCGHKEPPVPYLVLICEPIPHPSN
IEVPLDSKTFLSRHTMDMKFSYCDERITELLGYEPEELLNRSVYEYYHALDSDHLTKTHH
DLFAKGQVTTGQYRLLAKKGGFVWVETQATVIYNSKNSQPQCVVCVNYVLSGVVESDLVL
SLRQTATETETETKAETEAEAETEAEAETDLESVEALSPEFDMLKLFTTQAEAEREESLY
EKFKAQPEALTLLAPAAGDTIISLDFTCPDSDDQVLKEVPLYNDVMLPASSAKQAPGGPP
RPLSGGLDAKSNSGSQGFALSTARPGPSSTPCSSLGSPQPDGSMDYCFRVDSDLCDEFKL
DLVEKVFAMDTEAKTQFSSEDVGEMDLEMLAPYISMDDDFQLRSLSPDEPLPCSSQMVAP
AATKLEARPPSPLHLLHSVCSSPVIPIPLEPPDKPLTKTALAPPATQAPKRKRKLSDAVL
PKALGLGALLQTDPAAEAGKKLKVLETSTSEALPTHKTFLLLPSDVANRLFGCGLPQLTR
YDCEVNAPVAGRQHLLQGEELLRALDQVI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgatggatacaggagttgttactgaaaagaaaagcagggtgagctcggagcgcaggaag
gagaagtcccgggacgcggcgcgatgccgcagggggaaggagtcggaggtgttctacgag
ctggcgaacgagctgcccctccctcacaacgtcgtctcccacctggacaaggcctccatt
atgagactcgccatcagcttcctgcgcatgaggaaactgctcaacagcaataaagagtcc
tcgttggagtcggggtctgagtcggacctggacagccagctgaacggtttctacctgaag
gcgctggaaggcttcctcatggtgctgtctgaggacggagacatggtctacctgtctgag
aacgtcaacaagtgcatgggtctctcccagcttgacctgaccgggcacagtgtcttcgac
ttcacgcacccctgcgaccacgaggagattcgtgacatgctcatacacagaacaggcccc
tcaaagaaaggcaaggagccaaacacagagcgcagcttcttcctgcgcatgaagtgcacg
ctcaccagcagagggcgcactgtcaacgtcaagtcttccacatggaaggtgctccactgc
ttggggcacatccgcatgtacgacgaggggggggacagcggagagagcgggtgtggccac
aaggagccacccgtcccgtacctggttctgatctgcgagcccatcccgcacccctccaac
atcgaggtcccgctggacagcaagaccttcctgagccgccacaccatggacatgaagttc
tcctactgcgacgagaggatcacggagctgctcggctacgagccggaggagctgctgaac
cgctccgtgtacgagtattaccacgccctggactcggaccacctcaccaagacgcaccac
gacctgtttgcgaagggccaggtcaccacagggcagtatcgcctgctggctaagaaggga
ggctttgtgtgggtggagacccaggccaccgtcatctacaacagcaagaactcccagccc
cagtgcgtcgtgtgcgtcaactacgtgctcagcggcgtggtggagagtgacctcgtgctc
tccctgaggcagaccgcgaccgagaccgagaccgagaccaaggctgagaccgaggcagag
gccgagaccgaggcggaggccgagaccgatctggagtcggtcgaggccctcagccccgaa
ttcgacatgctgaagctgttcaccacgcaggcggaggccgagagggaggagagcctgtac
gagaagttcaaggcgcagccagaggccctgaccctgctggcgcctgccgccggggacacc
atcatctctctggacttcacctgcccagactcggatgaccaggtgctgaaggaggtgccc
ctctacaacgatgtcatgctgcccgcctccagcgccaagcaagcccccggaggtcccccg
cgcccgctgagcggcggcctggacgccaagtccaactctggctcccaggggttcgccctc
tccacggcccgccccggcccctcctccacaccctgctccagcctgggatcgccccagcct
gacggttcgatggactactgcttccgtgtcgactccgatctctgtgacgagtttaaactg
gacctggtggagaaggtgtttgccatggacactgaagccaagacccagttttcctcagag
gacgtgggggaaatggacctggagatgctggccccctacatctccatggacgacgacttc
cagctgcgctcgctgtccccggacgagcccctgccctgcagctcgcaaatggtggccccc
gccgcgaccaagctggaggcccgccccccctctcccctgcacctcctgcacagcgtgtgc
agctcccccgtcatccccatccctttggaaccgcccgacaaaccgctaaccaagacggct
ctcgcccccccggccacacaggcccccaaacgcaagaggaagctgtcggacgcggtgctg
cccaaggccctcggactgggtgcattgctccagacagatcctgcagcagaggcagggaag
aagctgaaggtgctggagaccagcacatcagaggcgctccctacgcacaagaccttcctg
ctgctgccctctgatgtggcgaacaggctcttcgggtgcggcctcccgcagctgacgcgg
tacgactgcgaggtgaacgcccccgtcgcgggccgccagcacctgctgcagggggaggag
ctcctgcgggcgctggaccaagtcatctga
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