Anguilla rostrata (American eel): 135257156
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Entry
135257156 CDS
T10705
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04140
Autophagy - animal
arot04148
Efferocytosis
arot05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135257156
04148 Efferocytosis
135257156
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135257156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arot04131
]
135257156
Membrane trafficking [BR:
arot04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135257156
Hops complex
135257156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-C3HC4_2
DUF2175
Apolipoprotein
zf-RING_Vps41
zf_RING_Vps8
zf-RING_2
zf-RING_UBOX
zf-C3H2C3
zf-rbx1
DUF1664
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
135257156
NCBI-ProteinID:
XP_064195688
LinkDB
All DBs
Position
6:complement(40144709..40150154)
Genome browser
AA seq
979 aa
AA seq
DB search
MASILDEYEDSQNMRHPVQQHNRLSASNIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEK
INHLTVCNNQLCMSLGKDTLLRIDLGKPDQPNQVELGRKDEAKVHKLFLDHTGSHLVICL
STSECLYLNRNTQKVRSLSRWKGHLIDSVAWNRLLGTEASTGPILVGTSLGLIFEAEIST
SEGSLFNTNPDQYFRQVHAVEEEDGQPAPVCCLEVERGMDSKYFIVATTRKRLFQFVGKL
PEGSEQQGFSSIFAQNQELLPSFQEFPVNMGYSEIVFYTPKLRSCAKDFAWMMGNGVLYG
QLDYSRLDSLLSNVQGWDYTPDIDLSSNKPLSIVLTQFHFLLLLRDRVKAICTLNGQVVH
EDVFPDKFGSLKRMIKDPAGGLVWIYTECAVFRYHIQREARDVWQMYTSMNRFDLAKEYC
RDRPECMDIVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKEEEALKEFLLK
KLGNLKSAERTQITLLVTWLTELYLNRLGRLESSGAESAILQEARQEFRGFLSSSKHKEC
FYNNRSTIYDLLASHGNVDDMVYFSVIMQDYERVISQHCQHDDYGAALEVLSKHCDQKLF
YKFSPVLMQHIPGKVVDAWIQMGKRLDAKKLIPALMNYSQTGSAQQINESIRYMEFCVYQ
LAVKDEAIHNYLLSLYAKYKPDSLLLYLDQAGTHQSEIHYDLKYALRLCAEHGYLQACVL
VYRIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMN
CLSSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIDGLKQEMEEATESAKRIRE
DIQEMRNKYGVVESQEKCAVCDFPLLNHPFYLFLCGHMFHYDCLRQEVTPHLSTYRQAKL
EELQKKLAATVQPARSRPRPKEDDTVSLGAGQPSREQIKSDIDDIIAAECVFCGDLMIRS
IDKPFIDPQKYEEEKSSWL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattctcgacgagtatgaagactcacagaatatgcggcaccctgttcaacag
cacaaccgtctgtctgcctcaaacattgggataactcattcaggattcgtgaatgttcgg
cttgaggaggagaagcctatattcaacaagcaaaggattgatttctctcccccagaaaaa
ataaaccatttaacagtatgcaacaaccagctatgtatgagtttaggaaaggatacgctt
ctaagaattgatctgggaaagcctgatcagccaaaccaagtcgaacttggacgtaaagat
gaggctaaagtccacaagctgtttttggatcacacaggctctcacttggtgatctgcctc
agcacgagtgagtgcctttacctgaacaggaacacacagaaggtccggagcctatcccgg
tggaagggtcacctgatcgatagtgtggcgtggaaccggctccttggcacggaggccagc
acgggcccgatcctagtgggcaccagcctggggctcatctttgaggcagagatctccacc
tcggaggggagcctgttcaacaccaacccggaccagtacttccggcaagttcatgctgtg
gaggaggaggacggccagccggcaccggtgtgctgcctggaggtggagcgggggatggac
tccaagtacttcatcgtcgccaccacgcgcaagcggctcttccagtttgtggggaagctt
ccggagggttcggagcagcaggggttcagctcaatctttgcccagaaccaggagctcctg
cccagcttccaagagttccccgtcaacatgggctacagcgagattgtcttctacaccccc
aaactgcgctcctgcgccaaggacttcgcctggatgatgggcaacggcgtgctgtatggc
cagctggactacagccgcctcgactccctgctgagcaatgtgcaggggtgggattacacc
ccggacatcgacttgagctccaacaagccgctctccatcgtcctgacacagttccacttc
ctgctccttctccgggatcgggtgaaagctatctgcaccctcaacggccaggtggtccac
gaggatgtgttcccggacaaattcggctccctgaagaggatgatcaaggaccctgcgggc
gggctggtgtggatctacacggagtgcgccgtcttccgttaccacatccagagggaggcg
agggacgtgtggcagatgtacaccagcatgaaccggtttgacctggccaaggagtactgc
cgggaccgtcccgagtgcatggacatcgtgctggccaaggaggccgagcactgcttccag
aacaagaggtacctggagagcgccaagtgctacgccctcacccagaactactttgaggag
atcgcgctcaagttcatcgaggccaaagaggaggaggccctgaaggagttcctgctgaag
aagctgggcaacctgaagtcggccgagaggacgcagatcaccctgctggtcacctggctg
accgagctctacctgaaccgcctgggccggctggagtccagcggtgcggagagcgccatc
cttcaggaggcccgccaggagttccgcggcttcctcagcagctccaagcacaaggagtgc
ttctacaacaaccgcagcaccatctacgacctgctggccagccacggcaacgtggacgac
atggtctacttctccgtaatcatgcaggactacgagagggtcatctcccagcactgccag
catgacgactacggcgccgccctggaggtcctctccaagcactgcgaccagaaactcttc
tacaagttctccccggttctcatgcagcacatcccgggcaaggtggtggacgcctggatt
cagatgggcaagaggctggacgccaagaagctcatccctgccctgatgaactacagccag
acgggcagcgctcagcagatcaacgagagcattcggtacatggagttctgcgtgtaccag
ctggccgtgaaggatgaagcgatccacaactacctcctgtcgctctatgccaagtacaag
ccggattcgctgctgctgtacttggaccaggctggcacgcaccagtcggagattcactat
gatctgaagtacgccctgcggttgtgcgctgagcacggctacctacaggcctgtgtgctg
gtctacaggataatggagctctacgaggaggccgtcgatctagctttacaagtggatgtg
gacctggccaagtcatgtgctgacctaccagaggatgacgaggagcttaggaagaaattg
tggctgaagattgcccggcacgtggtgcaggaggagaaagacgtgaaaaaggccatgaac
tgcctttccagctgcaacctgctgaaaatagaggatatcctgcccttcttccccgacttt
gtcaccattgaccacttcaaggaggccatctgcagctccttggaggagtacaaccaacat
atcgatgggttgaagcaggagatggaggaggccaccgaaagtgccaagcgcatccgggag
gacatccaggagatgcggaacaaatacggggtggtggagtcgcaggagaagtgcgctgtc
tgcgacttccccctcctcaaccaccccttctacctctttctgtgcgggcacatgttccac
tatgactgcctgcgccaggaggtgactccccatctgtcgacctaccggcaggccaagctg
gaggagctgcagaagaagctggccgccaccgtgcagcccgccaggtcccgcccccggccc
aaggaggacgacacggtgagcctgggggcgggtcagccgagccgcgagcaaatcaagtcc
gacattgacgacatcatcgccgccgagtgtgtgttctgtggtgatctgatgattaggtcc
attgataagcctttcattgatccgcagaagtatgaggaggagaaatccagctggctgtga
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